Labeo rohita (rohu): 127178670
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Entry
127178670 CDS
T09007
Symbol
lmna
Name
(RefSeq) lamin
KO
K12641
lamin A/C
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04210
Apoptosis
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127178670 (lmna)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127178670 (lmna)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127178670 (lmna)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type V: Nuclear lamins
127178670 (lmna)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
LTD
ATG16
TPR_MLP1_2
Exonuc_VII_L
HAUS-augmin3
Crescentin
Laminin_II
FtrD-like
DUF4407
Motif
Other DBs
NCBI-GeneID:
127178670
NCBI-ProteinID:
XP_050987640
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Position
16:15468394..15500099
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AA seq
628 aa
AA seq
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METPGQKRSTRGGATTVLSPTRITRLQEKEDLCNLNDRLAVYIDKVRSLESENAGLRLRI
SESETEISRELGGMKSAYEAELADARKTLDSVAKERARLQLELSKVREDYKDLKARNGKK
EADLESALARLKDLEALLNSKDASLSTALGEKRSLEVEVRDLKAQLAKLESGLSDAKKQL
QDEMLRRVDAENRIQTLKEELEFQKNIYTEELRESKRRHESRMVEIDSGRQQEYESKLAE
ALIELRNQHEEQLRIYKDEIEKTYNSKLENARQSADRSSHLVGAAHEELQQTRLRMEGVS
SQLTQMQKQLSARDAKIRELEEAMSRERDMMRRRMEDKEKEMAEMRHRMQQQLDEYQELL
DIKLALDMEISAYRKLLEGEEERLRLSPSPPPVRGVTVTRSSGSGAHARVVQSSTSRTSS
GSAKKRRLNDNDSDASSVVGGTVTRTRVAQQASASGRVTVDEVDMEGKYVRLSNKSDQDQ
SMGHWQVKRQIGSGTPIVYKFPPKFNLKAGQTVTIWAAGAGGTHNPPSDLVWKTQNSWGS
GDLFQTTLISSSGEEMAMRKVTRTLFQDEDDDEMAAHSTCGDSEYNLRSRTVVCGSCGQP
SDRNSSCISASSGVSSASRSFSSGGGAA
NT seq
1887 nt
NT seq
+upstream
nt +downstream
nt
atggagactccaggtcagaaacgaagcacccgcggaggggcgaccaccgtcctctctccc
acccgcatcactcggttgcaggagaaagaggatttgtgcaacctgaatgaccgtctggcg
gtctacattgataaggtgcgttctctagagtcggagaacgcaggtctgcgtttgcgcatc
agcgagtcggagacggagatcagccgggagctgggcggcatgaaatcggcgtacgaggcc
gagctggcggacgccaggaagacgctggactcggtggccaaagaacgagcccgactgcaa
ctagagctcagcaaggtgcgcgaggactacaaggatctgaaggccaggaatggtaagaaa
gaggcggatctggaatcggctctggccagactgaaggacctggaagctctgctgaactcc
aaggatgcgtctctttccacagcactgggggagaagagatcactggaggtcgaagtcaga
gacctgaaagcccagctggccaagctggagagcggtctgagcgatgctaagaagcagcta
caggatgaaatgctacgacgtgtggatgctgaaaaccgaatccagaccctgaaagaggag
ctggaattccagaagaacatctacactgaggagctccgtgagtctaagcgcagacatgag
tcacgtatggtggaaatcgacagcggccgccaacaagagtatgagagcaaacttgccgag
gctttgattgagctccgcaaccaacacgaagagcagcttcgcatctacaaagatgaaatt
gagaagacctacaactccaagctggagaatgcccgtcagtcggctgacaggagcagccat
ttggtgggagccgcccatgaggaactgcagcagacacgtttgaggatggagggtgtgtcc
tctcagctcacacagatgcagaaacagttgagtgctcgtgacgcaaagatccgtgagcta
gaggaggctatgtccagagagagggacatgatgcgacgtcgtatggaggacaaggagaaa
gagatggccgaaatgaggcatcgcatgcagcaacagttggacgagtaccaggagctgctg
gacattaagctcgcgctcgacatggagatcagcgcctaccggaaacttctggagggtgag
gaggagaggcttcgtctctccccgagtccccctcctgtccgtggagtgactgtgacccgc
tcttcgggttctggcgctcatgcgcgtgtggtgcagagcagcaccagtcgtacctcctca
ggcagtgctaaaaaacggcgcttgaatgataacgacagcgacgcctccagcgtggtcggc
ggaactgttactcgcacacgcgtcgcccagcaggcctcagccagcggccgcgtgaccgtg
gacgaagtggacatggagggcaaatatgtacggctcagtaacaagtctgaccaggatcaa
agtatgggtcattggcaggtgaagaggcagatcggttccggcacccccatcgtctacaag
ttcccaccaaaatttaacctgaaggcaggacagactgtcacgatctgggccgcaggagct
ggaggaacccacaaccctccttctgacctggtgtggaagacccagaactcatggggcagt
ggagatctgttccagaccaccctcatcagctccagtggggaggaaatggcaatgaggaag
gtcacacgcactttgttccaggatgaggatgatgatgagatggccgcccatagcacatgc
ggggatagtgagtacaacctccgcagccgtacggtggtctgtggctcatgcgggcagccg
tcagataggaacagcagctgcatttcggccagctctggagtgtcgagtgcgtctcgctca
ttcagcagcggagggggggctgcctga
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