Labeo rohita (rohu): 127178698
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Entry
127178698 CDS
T09007
Symbol
pex5
Name
(RefSeq) peroxisomal biogenesis factor 5 isoform X1
KO
K13342
peroxin-5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
127178698 (pex5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127178698 (pex5)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
127178698 (pex5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_11
TPR_8
TPR_16
TPR_17
TPR_14
TPR_19
TPR_CcmH_CycH
TPR_Slam
TPR_12
TPR_20
ANAPC3
TPR_9
MAS20
TPR_10
DUF7017
PEX18_PEX21_C
Secretin_N_2
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
127178698
NCBI-ProteinID:
XP_050987683
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All DBs
Position
16:complement(22881707..22899430)
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AA seq
641 aa
AA seq
DB search
MAMRELVEGECGGANPLMKLTGHMTQEGGAWRHRSTPTIPPTPIEIATEEELVSEFLQAP
QRPPHTFDMGQLLEEMQQIDQQSYRQAPQRAPDVAALALSGDWAAEFLSSADSASSSGQA
GLDPADADWTREFINEVADPGRWAEEYLEQSEEKLWLGDLGEREQDKEWTQEYQAGEELR
QTANELLAKVDDPKLQNTEFLRFIRQIGEGSVTVEDRAGKENTDKAQAKEAQHWASSINQ
VSAESAESWVDEFTAYGPDFQQAKAAVESDVDFWEKLQQEWEEMAKRDAEAHPWLSDFDQ
MLSSSYDKGYQFEEDNPYLSHDDPFAEGVKRMEAGDIPGAVRLFESAVQREPDNQLAWQY
LGTCQAENEQEFAAISALRRCIELKKDNLTALMALAVSFTNESLHRQACETLRDWLRHNP
KYRHILEQHEREKEREGVREREKERERFGSLLPEALFNEVQTLFLNSAAAEPTRVDPELQ
CGLGVLFNLSGEYDKAVDCFSAALSVKPQDYLLWNKLGATLANGNRSEEAVAAYRRALEL
QPGFVRSRYNLGISCVNLGAHREAVEHFLEALSLQRQAASDGEGGAGRGPGAAATVMSDN
IWSTLRMALSMMGESSLYSAADRRDLDTLLAHFCQRDVEAE
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgcgggagttagtggagggggaatgtgggggagccaatccgctcatgaaactc
actggtcacatgacccaagagggcggggcttggagacaccgatcaacacccactattcct
cctactccaattgaaatagccactgaagaggagctggtcagtgagtttctacaggcccca
caacgacctcctcacacttttgatatgggtcaactgctggaagaaatgcagcagatagat
caacagagctacagacaggctccacagagagctcctgatgtggctgctctagcactgtct
ggcgattgggcagcagagttcttgtctagtgccgactccgcctcttcttctggacaagct
ggtctggatcctgctgatgctgattggaccagagagttcatcaacgaagtagcagaccct
ggccgctgggcagaggagtacctggagcaatcagaggaaaagttatggctaggagatttg
ggagaaagagagcaggacaaagaatggacacaagaataccaggcaggtgaagaactacgg
caaacagcgaatgaactccttgccaaagtggatgaccctaaactacagaacacagagttc
ctgcggttcattaggcagattggcgagggcagtgtgactgtggaggacagagcaggaaaa
gagaacactgataaagcacaggccaaggaggcacagcactgggcctccagcattaaccag
gtttcggcagagtctgcagaatcttgggtagatgaattcaccgcttatgggccagacttc
cagcaggccaaagcagcagtcgagagcgatgttgatttctgggagaaactccagcaggag
tgggaggaaatggcgaagagagatgctgaagctcacccttggctctcagattttgaccag
atgctcagcagctcttatgacaagggatatcagtttgaagaagacaacccctacctgtcc
catgatgatccgtttgctgagggcgtgaagaggatggaggcgggggacattcctggagcc
gtacgcctctttgagagcgcggttcagagagagccagacaaccagctggcttggcaatat
ctgggcacctgccaggcagagaacgagcaagagtttgcagctatcagcgccctccgcaga
tgtattgagctgaaaaaggacaatctgacggctctcatggctttagctgtgagcttcacc
aatgagtcactacatagacaggcctgcgagacgcttcgtgattggttgaggcacaaccct
aaataccggcatatccttgagcagcatgaacgagagaaggagcgcgagggtgtgagggag
agagagaaagaaagagagagatttggatcacttttgccagaggcactttttaatgaagtg
cagacgttgtttttgaattcagcggctgctgaacccacacgggtggatcctgagctgcag
tgtggtctgggcgttctcttcaacctgagtggagagtatgacaaggctgtggactgcttc
agtgccgccctgtctgtgaagccacaggattatctactgtggaacaagctgggagcgact
cttgctaatggaaaccgatcagaggaggcagtcgctgcttacagacgcgcgctggaatta
caacctgggtttgtacgtagccgatataacctgggcatcagctgtgtcaatctgggtgca
cacagggaggcagtagagcacttcctagaggccctatctctgcagcgacaggccgcaagt
gatggagagggaggtgcgggtcgaggaccaggtgcagcagccactgtgatgtcagacaac
atctggtccacattacgcatggcactgagcatgatgggagaaagctcgctttactcagcc
gccgaccggcgagatctggacacgctgctggcgcacttctgccagagagatgtagaggct
gaatga
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