Labeo rohita (rohu): 127178783
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Entry
127178783 CDS
T09007
Symbol
cacng8b
Name
(RefSeq) voltage-dependent calcium channel gamma-4 subunit
KO
K04873
voltage-dependent calcium channel gamma-8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04260
Cardiac muscle contraction
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127178783 (cacng8b)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127178783 (cacng8b)
04261 Adrenergic signaling in cardiomyocytes
127178783 (cacng8b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127178783 (cacng8b)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127178783 (cacng8b)
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GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
AA_permease_2
CD20
DUF4383
TMEM128
Motif
Other DBs
NCBI-GeneID:
127178783
NCBI-ProteinID:
XP_050987852
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All DBs
Position
16:complement(23318894..23351574)
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AA seq
425 aa
AA seq
DB search
MVCEKGIQILLTIVGAFASFGLMTVAIGTDYWLYSRALICNSTANTTQEDPHNKEKKDPG
ALTHSGLWRICCLEGVKRGVCSQINHFPEDADFDHDGAEYVLRVVRASNIFPILSAILLL
MGGVCIAASRFYKSKRNIVLGAGILFVAAGLSNIIGVIVYISAALGDISPKKDEDKKWQY
SYGWSFYFGGLSFILAEMVGVLAVNIYIEKNKELRCRSRTDIFKSTTHAMLRLPSYRFRR
RSRSSSRSTDPSRSRDPSPVGGPPGGKNFGMPPSALLSQGPISVSTLPNPHSRSALPGGD
ISLYTLSRDPKLGGLGGLGAPPLYGTVDRATLYQLHNCFPKESGGGGGGMMMSGTLPSLK
SHNPSAVQNSSNSNAPLSNSVPSSQPPPFSSSTVERERGMGTLDRLGKGDRESNSNTLNR
KTTPV
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgtgagaagggtattcagatccttctcaccatcgtgggtgctttcgcatccttc
ggcctgatgacggtggctatcggcactgattattggctgtattcgcgggcgctcatctgt
aacagcaccgccaataccacacaagaggatccccataataaggagaagaaggaccccggg
gccttgacgcactctggcctgtggaggatctgttgtctggagggggtaaagcgtggcgtg
tgctcccagatcaaccacttcccagaggacgctgactttgatcatgatggagcagaatat
gtcctgcgagtggtccgggcctccaacatctttcccattcttagtgccatcctgctgcta
atgggaggagtctgtatcgcagccagccgtttctacaagagcaaaaggaacatcgtgctg
ggtgctggcattctctttgtggcggcaggcctgagtaacatcattggtgtgatagtgtac
atttctgccgctctgggtgacatttccccaaagaaggacgaggataagaaatggcagtac
tcctacggctggtccttctacttcggcggtctctccttcatcctggccgagatggtgggc
gtgctggcggtaaacatctacatcgagaagaacaaggagctccgctgtcgttctcgcacc
gatatcttcaagagcaccactcatgccatgctacggctcccgagctaccgcttccgccgc
agatcgcgttccagctcccgatccaccgacccctcgcgctcacgagacccttctcccgtg
ggcggcccgccggggggaaagaacttcggaatgcccccgtccgctttactctcccagggg
cccatctctgtatccactctacccaaccctcactcacggtccgctctgccagggggcgat
atttccctttacaccctttcccgagaccccaaactgggtggcttgggagggctgggcgcc
cctccgctgtacggcacggtggaccgtgccactctataccagctgcacaactgcttccct
aaggagagcggagggggcggaggaggcatgatgatgagcgggacgctgccctcgctcaaa
tcccacaatccctcagcagtccagaattcttccaactccaacgcgccgctcagcaactcc
gtcccgtcgtcccagcctccccctttctcctcgtctacggtggagcgggaacgagggatg
ggaacgctggataggctaggaaaaggtgatagagagagtaactccaacacgctaaatagg
aaaactacaccagtttag
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