Labeo rohita (rohu): 127178814
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Entry
127178814 CDS
T09007
Symbol
cntnap2b
Name
(RefSeq) contactin-associated protein-like 2b
KO
K07380
contactin associated protein-like 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecule (CAM) interaction
lroh04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
127178814 (cntnap2b)
04517 IgSF CAM signaling
127178814 (cntnap2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127178814 (cntnap2b)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Laminin domain-containing proteins
Laminin G domain-containing proteins
127178814 (cntnap2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
F5_F8_type_C
Laminin_G_3
F5_F8_type_C_2
EGF
hEGF
COLFI
Motif
Other DBs
NCBI-GeneID:
127178814
NCBI-ProteinID:
XP_050987905
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All DBs
Position
2:complement(34731057..34778714)
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AA seq
1313 aa
AA seq
DB search
MRRIVGLELPLILWIWSVYMKLSAGAQRCDEVLASPLPYSAFTSSSVLAADFGAGYAKLN
RRVGNGGWSPLDSDRYQWLQVDLRARKQITAIATQGRYSSSDWTKHYRLLYSDTGSNWKS
YRQDSNIWTFSGNWNSERAVRHELQHPFVARYVRFIPVDWSEEGRIGLRVELYGCAYWAD
VISFDGQGVISYRFRQKKMKILKDVISLKFKSTKGDGVLLHGEGQQGDYITLELRRAKLL
LQINLGSNQYGSIQGHTSVSSGSLLDDDHWHSVLIERYRRSVNFTLDQHTQSFRTNGEFD
HLDLDYEITFGGMPVSAKPSSGGRENYVGCMEAIHYNGDNITNLARRRKVDTSSFHNLTF
SCAESHTFPAFFNSTSSLQLPGRTDADTVSVRLQFRTWNPSGLLFFTPLMPGGVEVSLVE
GKVTVHIYVSLGKNTRVDISSGSGLNDGQWHSVHFLALESIAMLTINGDEMSTVRAALPM
QIRTGGDYFFGGYFPRTDLSPSQRSFQGCMQLIHVDDQLVDLQSVEQGMLGSFENVSLDM
CAIIDRCVPNHCEHGGKCSQTGDTFKCACEGTGYSGATCHNSVYEQSCEEYKQLGRNSDT
YWIDPDGSGPLEPFRVTCNIMEDKVWTTIVNDLPAQSSVSAGSRPEDKTVLTLNYSMSAE
QANAVTSSAEFCEQHVAYMCYKSRLLNSPDDSPSTWWVGRGNEKHFYWGGSGPGVQKCAC
GIERNCTDPRYYCNCDADLRQWKEDAGLLMYKDHLPVNQVVVGDIYRSGSEARLTVGPLR
CQGDRHFWNAASFNTPASYLHFPTFQAETSADVSFYFKTSASHGVFLENLGNPDFIRIEL
KFATVVSFSFDVGNGPVELNVRSSTPLNDDQWHRVEAERNIKEAVLRLDKVHREARSAPP
QGHTRLQLFSQLFVGASGGQRGFLGCIRSLKVNGVTLDLEGRAKVTPGVKPGCSGHCSSY
GMHCQNGGKCIEKYNGYSCDCSLTAFDGPFCNDDVGGYFESGTLVRYDLMSESSSSPPAK
EGSSGVLSAVGNLTREELSFSFSTSHTPAVLIYISSKTQDYLAVVLRHNGTLQIRYNLGG
LREPFTISLNHRNMANGQPHNVNITRQDRLIQLQVDHYPTVGYTLPEASDTEFNLVKTIF
LGKVFETGQIDPVLIERYNTPGFVGCLSRVQFNRIAPLKAALRTGVPSTASIQGVLVESN
CGASPLTVPPMSAVFDPWHPDSTGARFPFNEERISRDGVNRDSAIIGGIIAVVIFTILCT
LVFLVRHMFHHKGSYHTNEAKGAESADCADAAIIVNDPAFTETIDESKKEWFI
NT seq
3942 nt
NT seq
+upstream
nt +downstream
nt
atgcgacggattgttggactggagctgccgctgatattgtggatatggagtgtttatatg
aagctcagcgcaggagcccagaggtgtgatgaggtgttggcttcaccccttccctacagc
gccttcaccagctcctccgtcttggcagcggattttggcgctggctatgcaaaactcaac
aggagagtagggaatggaggatggtcgccgttagactccgacaggtaccagtggctacag
gtggacctcagggccaggaaacagatcactgccatagcaacacagggcagatacagcagc
tctgattggacaaaacactacaggcttctttacagtgacacaggaagtaactggaagtcg
tatcggcaagatagcaacatatggacattttcaggtaactggaactcagagcgggcggtg
cgccatgaactccagcaccctttcgtggcccgatacgtgcgcttcatccccgtggactgg
agtgaggaggggagaattgggctgagagtggagctctatggctgtgcttactgggcggat
gtgatcagctttgacggccagggagtgatttcctatcgatttagacagaaaaagatgaag
atcttgaaggacgtgatatcactgaagtttaagagcactaagggagatggcgttctgctg
cacggagagggacagcagggcgattacatcactctagagcttcgccgagccaaactactg
ctgcagatcaacctgggcagtaatcagtacggctccattcagggtcacacatcggtgtct
agcggcagtctgttggatgacgaccactggcactctgttctgatcgaacgctacagacgc
agcgtcaacttcacactcgaccagcacacacagagcttccgcaccaatggagagtttgac
catctggacctagactatgaaattacatttggagggatgccagtgtctgccaagcccagc
tcagggggcagagagaactacgtcggctgtatggaggccattcattacaacggggacaac
atcactaacctcgcgcgcaggagaaaagtagacacctccagcttccataacctgacgttc
tcctgtgcggagtcccacacgttccccgccttctttaactccaccagctccttgcagctt
ccgggtcggactgatgcggacacggtgtcggtccgactgcagtttcggacgtggaacccc
agcggtctgctgttcttcaccccgctcatgcctggaggagtggaggtcagcctggtggag
ggtaaagttaccgtccacatctacgtcagtctggggaaaaacacacgcgtggacatatcc
tcaggttctggccttaatgatggacaatggcacagtgttcactttctggcactggaaagc
atagccatgttgaccatcaatggagatgagatgtccacagtgagagctgctctccctatg
cagatcaggactggaggagattactttttcggaggatacttcccgcggacagacctttct
ccgtcacagcgctcatttcagggctgcatgcagctcatacacgtcgacgaccagttggtc
gacctgcagtctgtggagcaaggcatgctgggtagctttgagaacgtcagtctggatatg
tgtgccatcatagacagatgtgtgccaaaccactgtgaacacggaggcaagtgctctcaa
actggagacacgtttaaatgtgcctgtgaaggcactggatactctggtgccacctgccac
aactctgtgtacgagcagtcctgtgaggagtacaaacaattgggtcgaaattcagacaca
tactggatcgatccagacggcagtggacccctcgagccattcagagtcacctgcaatatt
atggaagacaaagtctggacaaccattgtgaatgaccttccagctcaaagctctgtgtcg
gcgggttccagacctgaagacaagactgtgctcacactcaattacagcatgtctgctgaa
caggcgaacgccgtcaccagcagcgctgagttctgcgagcagcatgtggcgtacatgtgc
tacaaatcacgcctgcttaactcaccagatgattccccgtccacatggtgggtcggcagg
ggaaatgagaagcacttctactggggcggctcaggaccaggtgtgcagaaatgtgcctgt
ggcattgaacgcaactgcacagatcccagatactattgcaactgtgatgcagatctgaga
cagtggaaagaagatgctggcctgttgatgtataaggaccatctgcctgtcaatcaggtg
gttgttggtgatatttatcgctctggatctgaagccagactaactgttgggcctctccga
tgtcagggagatcgtcacttctggaatgcagcgtccttcaacactcctgcatcttatctt
cattttcccacctttcaagccgagaccagcgcagacgtctctttctattttaagacttca
gcctcacatggtgtctttctggaaaaccttggcaatccagattttattcgcatagaactc
aaatttgctacagtggtgtcattctcattcgatgttggcaatgggccggtggaattaaac
gtacgctcatccacaccccttaatgatgaccagtggcacagggtggaggcggaacggaat
attaaagaggcagttttgcgattggacaaggtgcatagagaggcgcggtcggccccacct
cagggccacacccgtctgcagctcttcagccagctgtttgtaggtgcctcaggtgggcag
agaggatttctgggttgcattcgttccctaaaggtcaacggagtgacgcttgaccttgaa
gggagggcaaaggtcacaccgggggtgaagcctggatgctcgggtcactgcagcagctat
gggatgcattgccagaatggagggaaatgtattgagaagtacaatggatactcatgcgac
tgcagtctgaccgcctttgatgggcctttctgcaatgatgatgttggagggtattttgag
agcgggaccctggtacggtacgacctcatgtccgagagtagttcttctcctccagcaaag
gaaggcagctctggagtcctaagcgcggtgggtaatctgactcgtgaggagctgagcttt
agtttcagtacgtcccacacacctgcagtcctcatctacatcagctccaagacgcaggac
tacctggccgtggtgctgcggcacaatggtactttacagatccgctataacctgggagga
ttgagggagccctttacaatcagcctgaatcatcgtaatatggctaacggtcagcctcat
aatgtcaacatcacccgtcaggacagactcattcagctgcaggtggatcattatcccaca
gtaggctacactcttcctgaagcctcagacactgagtttaaccttgtgaagaccattttc
ctaggcaaagtttttgaaacaggtcagattgatccggtgttgatagaacgatataacacc
ccaggattcgtgggttgtctctccagagtccagttcaaccgcattgccccgttgaaggcc
gccctgaggaccggagtgccctccacagcctccatacagggagtcctggtggaatccaac
tgcggggcgtctccactcacagtaccgccaatgtctgcagtctttgacccctggcaccca
gattcaaccggtgccaggttcccattcaatgaggagcgaatcagccgtgatggcgtcaac
agagactctgcaataattggaggcatcatcgcagtggtgattttcaccatcctctgcacg
ctggtgttcctggtgcgtcacatgttccatcacaagggctcctaccacaccaacgaggcc
aaaggggcggagtctgccgactgtgctgatgcagccatcatcgtgaatgaccccgccttc
acagagaccattgatgagagcaagaaggagtggttcatttag
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