Labeo rohita (rohu): 127178839
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Entry
127178839 CDS
T09007
Symbol
irx4a
Name
(RefSeq) iroquois-class homeodomain protein IRX-4a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127178839 (irx4a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
127178839 (irx4a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
127178839
NCBI-ProteinID:
XP_050987947
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All DBs
Position
16:38430749..38434089
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AA seq
463 aa
AA seq
DB search
MSYPQFGYPYSSAPQFLMTTNSLTSCCESSTRSISDSSAQTPVYCPVYESRLLATARHEL
SSAAALGVYGSPYTGGQGYGNYVTYGADASAFYSLGTFDAKDGSASAHAGITQAAAYYPY
DPTLGQYQYDRYGSMEGGTRRKNATRETTSTLKAWLQEHRKNPYPTKGEKIMLAIITKMT
LTQVSTWFANARRRLKKENKMTWPPRNKGSDDKKYDDDEDGSQDEQIKSETNDEESKSRE
DKELQLSDLDDFDTIESESSECELKHRFHMNAHMATTDDRLKEPSPKLSIPGLLEAERDL
AKSCLKSTADDCEHELRHSKTCFQQQGHPLLDSKPRIWSLAQTATSLNPTEYSSCMLRCQ
PSPSASSPVSGLERQQDSPVTTLRNWVDGVFHDPLFRHSSLNQAQTNTTVSWTTSTKGSI
LETGALGRSMGNNNNNNVIKTQQQEASKDSMTFPKGVNKIFCS
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcctcagttcggatatccttactcttctgcacctcagttcctcatgaccacc
aactctctgacatcttgctgcgagtcgagcaccagatccatctcggattcgtccgcgcag
acgcccgtttactgtcccgtgtacgagagcagactgctggccaccgccagacacgagctg
agctccgccgccgcgctgggagtctacgggagcccgtacaccggcggtcaaggctacggg
aattatgttacctatggagctgacgcgtccgctttctactctttgggaacgtttgatgcc
aaagatggaagtgcgtctgcgcatgcgggtataacacaggctgccgcatattacccatat
gatcccaccttgggacagtaccagtatgacagatacggatctatggagggaggaaccaga
aggaagaacgccacccgtgagacgaccagcaccttgaaagcgtggcttcaggagcaccgg
aagaacccctatcccactaaaggcgagaagatcatgctggccatcatcaccaagatgacc
ctcacgcaggtgtccacctggtttgccaacgccagaagaaggctcaagaaggagaacaag
atgacatggccaccgagaaacaagggctcagacgataagaagtacgatgatgatgaggat
ggctcgcaggacgaacagatcaaaagtgaaaccaacgatgaagagagcaaaagtcgagaa
gacaaggagctacagctgagtgacttggacgacttcgataccatcgagtctgagagctca
gagtgtgagctcaagcaccgctttcacatgaacgcgcacatggcgaccaccgacgatcgc
ctcaaggagccttctccaaaactctccattcccggtctgctcgaagccgagcgcgatctc
gccaaaagctgcttgaaaagcaccgcggacgactgcgagcacgagcttcggcacagcaaa
acgtgcttccagcagcagggccatccgttactggacagcaaaccccgcatctggtctctg
gcccagaccgcgacctcgttgaacccgacagagtactcctcgtgtatgcttcgatgtcag
ccatcgccctccgcctcctcacctgtcagcggcctggaaagacagcaggactcacctgtt
acgactctcagaaactgggtagatggagtttttcacgaccccttgtttagacacagctcc
ttaaaccaagcacagacgaacactacggtttcttggaccacctcgaccaaagggtcgatc
ttagagactggagcccttggacgctccatggggaacaacaacaacaacaacgtgataaaa
acacagcagcaagaggccagcaaggacagtatgacatttccaaagggcgtgaataaaata
ttctgctcctag
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