Labeo rohita (rohu): 127178869
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Entry
127178869 CDS
T09007
Symbol
thbs3a
Name
(RefSeq) thrombospondin-3a
KO
K04659
thrombospondin 2/3/4/5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127178869 (thbs3a)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127178869 (thbs3a)
09144 Cellular community - eukaryotes
04510 Focal adhesion
127178869 (thbs3a)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127178869 (thbs3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127178869 (thbs3a)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127178869 (thbs3a)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127178869 (thbs3a)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Opsonins
127178869 (thbs3a)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
127178869 (thbs3a)
Exosomal proteins of colorectal cancer cells
127178869 (thbs3a)
Exosomal proteins of bladder cancer cells
127178869 (thbs3a)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
127178869 (thbs3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TSP_C
TSP_3
COMP
EGF_CA
EGF_3
EGF_MSP1_1
cEGF
EGF
Motif
Other DBs
NCBI-GeneID:
127178869
NCBI-ProteinID:
XP_050987987
LinkDB
All DBs
Position
16:7611363..7627404
Genome browser
AA seq
891 aa
AA seq
DB search
MKVWVSLFVFMFVWFAESAQKQDVPVIDVLSLEDVKQTVAAVEKISLALKTLSDVYVMSS
FRLPSKLGGVLLGLYNKQDNKKYLEVAIMSKINKVLVRYVREDGKLHTVNMQSPNLADGR
TQSIILRVGGLRREYLSLELYVNCRVVDSAQRLPLLVALPRDAELVEIRNGHKAYTRMQG
SVEYLKLALGGTVAQAGAITDCPFQGDASSYNIVNGEVNSILGDHTKALIGQLIIFNQIL
GELREDIREQVKEMSLIRNAILECQMCGFHEPRSRCQPNPCFKGVACMETFDFPGYRCGP
CPEGMTGNGTHCQDIDECAEAQPCYTPGACINTAKGFTCEPCPAGLWGPPLSGFGVEYAK
SHRQECSDVDECVDLANACTPNSICINTIGGYRCGQCKVGYVGNQTAGCFPRKSCASLSF
NPCDTNAHCIIQRNGDVTCACNVGWAGNGHTCGKDTDIDGYPDRSLPCMDNDKHCKQDNC
IFTPNSGQEDADNDGIGDQCDEDADGDGIKNVEDNCRLVSNKDQQNSDTDSFGDACDNCP
TVPNIDQKDTDNNGEGDACDDDIDGDGIQNVLDNCPKVPNPMQTDRDRDGVGDACDSCPE
ISNPMQTDVDNDLVGDVCDTNQDTDGDGHQDTRDNCPDIPNSSQLDSDNDGIGDDCDEDD
DNDGVPDNYAINGFGPDNCRLISNPNQKDSDSNGVGDVCENDFDNDAVLDLIDVCPESAE
VTLTDFRAYQTVILDPEGDAQIDPNWVVLNQGMEIVQTMNSDPGLAVGYTAFNGVDFEGT
FHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQTEQTYWQSIPFRAMADPGLQLKAVKSRTG
PGEFLRNALWHTGDTDGEVKLLWKDPRNVGWQDKTSYRWQLSHRPQVGYIR
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgaaagtttgggtcagtctgttcgtgttcatgttcgtctggttcgcagagagcgctcag
aaacaagatgtaccggttatagacgtgttgagtttggaggatgtgaagcagaccgtggct
gcggtggagaagatttcgttagctctgaagactctcagtgatgtgtatgtgatgtcttcc
ttccgtctgccttcgaaactgggtggagttctgctgggcctctacaacaagcaggataac
aagaaatacctggaggttgccatcatgagcaagatcaacaaagttctggtccggtatgtt
cgtgaagatgggaagctgcacacagtaaacatgcaaagcccaaatctggcagacggacgg
actcagtctattattctccgtgtcggtggcctgcgcagagaatacctgagcctcgagctt
tatgtgaactgtcgtgtggttgactccgcccagcggctgcccctattggttgctctgccc
agagatgcagagctggtggagattcgtaatggccacaaggcatacactcggatgcagggt
tcagtggagtatcttaaactggcactaggaggcactgttgcccaagctggggctattacc
gactgcccctttcagggagacgcctcttcttataacatagtgaatggtgaggttaattct
attctaggtgaccacactaaagctctgattggccagctgatcatctttaatcagatcttg
ggagagctgagagaggacatcagagaacaggtgaaagaaatgtctctcatcaggaacgct
attctggagtgccagatgtgtggatttcatgagccgcgctcacgctgtcagcccaacccc
tgctttaagggcgtggcctgcatggagacgttcgatttcccagggtaccgctgtggcccc
tgtccggagggcatgactgggaacggcacacactgtcaggatatagatgagtgtgcagag
gctcagccgtgttatacaccaggtgcatgtatcaacacagcaaaaggtttcacctgtgag
ccctgcccagctggactgtggggtcctcctctctctgggttcggcgtggaatatgctaag
agtcaccgtcaggaatgctctgatgtcgatgaatgtgttgatttggccaacgcttgcaca
cccaactccatctgcatcaacactattggaggatatcgatgcggtcagtgcaaggttgga
tatgttgggaatcagacagccggatgtttccctcggaaatcgtgcgcttcgctcagtttc
aacccctgtgacactaacgctcactgcatcattcagcggaacggcgacgtcacttgcgct
tgtaatgtcggatgggctggtaatggtcacacctgtggaaaggacacggatattgatggc
tatccggatcgctccttgccctgcatggataacgacaagcactgcaagcaggacaactgc
atcttcacgcccaactctggtcaggaagatgcagataatgatgggatcggagaccagtgt
gatgaggatgcagatggagatggaataaagaacgtagaggataactgtcggttggtttcc
aataaggatcagcagaactctgacactgattctttcggtgacgcgtgtgataattgtccc
accgttcccaacattgaccagaaagacactgacaataatggagagggagacgcttgcgat
gacgacatcgatggagatggaatccagaacgttctggataactgtcccaaagtgccgaac
ccaatgcagacagaccgggacagagacggagtgggtgatgcgtgtgacagctgtcctgag
attagcaaccccatgcagacagatgtagacaacgacctagtcggggatgtttgtgacacc
aatcaagacactgatggagacggacaccaagacactcgagacaactgccccgacattcca
aacagctcacagctcgactcagacaatgacggcatcggagatgactgtgacgaagacgac
gataacgacggggttccagacaattacgccatcaatggcttcggtcccgataactgcaga
ctcatttccaaccctaaccagaaagactcagacagtaatggagtcggtgacgtttgtgag
aatgactttgacaatgatgcagtgctggatttgattgacgtgtgtccagaaagtgctgaa
gtcacacttacagatttcagagcctatcaaacggtcattctggacccggagggtgacgct
cagatcgacccgaactgggtggtgctcaatcagggtatggagattgttcaaaccatgaac
agcgacccgggattggcagtgggttatacagcgtttaacggtgtggacttcgaaggaaca
tttcacgttaacacagtgactgacgatgactatgctggcttcatctttggctatcaggat
tcgtctagtttctatgtggtgatgtggaagcagactgaacagacgtactggcagtcgatc
ccattcagggccatggctgaccctggtctgcagctcaaggcagtgaagtctcgtacaggc
ccgggcgagttccttcgtaatgcactttggcacacgggggatacagatggagaggtgaaa
ctgctctggaaagacccacgaaatgtcggctggcaagataaaacctcataccggtggcag
ctcagccatcggccacaggttggctacatcaggtga
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