Labeo rohita (rohu): 127178896
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Entry
127178896 CDS
T09007
Symbol
itga10
Name
(RefSeq) integrin alpha-10
KO
K06586
integrin alpha 10
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04512
ECM-receptor interaction
lroh04810
Regulation of actin cytoskeleton
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
127178896 (itga10)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127178896 (itga10)
09142 Cell motility
04820 Cytoskeleton in muscle cells
127178896 (itga10)
04810 Regulation of actin cytoskeleton
127178896 (itga10)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127178896 (itga10)
Cell adhesion molecules [BR:
lroh04515
]
Integrins
Integrin alpha subunits
127178896 (itga10)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_2
Integrin_A_Ig_1
Integrin_A_Ig_3
VWA_2
FG-GAP_3
ITGAX-like_Ig_3
FG-GAP_2
LapA_dom
Motif
Other DBs
NCBI-GeneID:
127178896
NCBI-ProteinID:
XP_050988027
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All DBs
Position
16:complement(24162993..24219370)
Genome browser
AA seq
1171 aa
AA seq
DB search
MEIHKYLLLLKITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDEINSNCSKVNLGENAFQNISRNLKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKEVIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACSEAFSPDRGAREGATKVMIVVTDGESHDGEDLPESLAECEKRNITRYA
IAVLGHYSRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWKRLYVAGAPRFKHKGKVILFDLTPEGDVLITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLHSQ
KKAQDARFGYAMAVAPDLNHDGYADLLVGAPLEDDHQGALYIYHGDEYYIIPQYKQRIPG
SSLSPGLQYFGRSLSALLDLDGDELVDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINV
IQKNCYRAGRDSACLNATVCFLALSRSPGSYGTYFDMQMGAMLDDRKILARALFDYSSQR
QTLMGVIVRVGETICYTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IPFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALGSNSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISKVQMKLIASSDSVENEGTLSDNSVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTISE
GTGPEFYTHFKVQNLGCYAVSNVDLSVSLPAVASGDRVFATVVDASFLNSSGVNCSIVSD
LSKLKSSQRDVRPLHPEDMKKTELLNCTSSWCVEVVCHIQQLLKGETALVRITRRIQDNF
FRQAKFKAVTIVGSYQLSARESSLISMGNAALVRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFFLWKLGFFTRKQRKDEDENDDN
NT seq
3516 nt
NT seq
+upstream
nt +downstream
nt
atggagattcacaagtacctgctgttgttgaagatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccaaggatcttcagtgggcctgaagatgctctg
ttcggcttctctgtgttacagcatgagaacaatggagagaaatcaattctggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttacaagtgcattgtgggagat
gagataaattcaaattgctcaaaagtgaacctaggagaaaatgcatttcagaatatctct
cgaaatcttaaaaactctcatttggggatgacactgacccctgctgcttcagatggcttc
ctggcctgcgctccactatggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcgtctgtcaccaatgacatggagcccaaggaagtcattgcacccactgcccagaga
tgcacaacatacatggacatagtcattgttttagatggttctaatagtatctacccctgg
tatgaggtgcagaacttccttagcaacattctcagcaagttccacataagccctgagcaa
atgcaggtaggtgtcctgcagtacggggagatctcggtccatgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaagaacattagtcgtcaagagggacgt
gagacccggaccgcgtacgccatccaaatggcctgctctgaggcttttagtccagataga
ggagcgagggaaggagccaccaaagtgatgatagttgtgacagatggagagtcccatgat
ggcgaagaccttcccgagtctcttgctgaatgtgagaaacgtaacatcaccagatacgcc
atcgctgtattaggtcactacagccgcagacagcaagacccagagacctttatcaatgag
attaagtacattgccagtgaccctgatgagaaatacttcttcaacgtgacggatgaggct
gctctaaatgacattgtagatgcattgggggatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcaacacacatt
ttggatgatggcatcttgtttggtatggtgggtgcatatgactgggagggaggtgtccta
aaggagagcaaagaagggcagcttaagccctcaagagaggcctttgagaaagagtttcca
ttggagctgaagaatcatgcagcctacctaggttacacagtgtcgtcagtggttgtgggt
gactggaagaggttgtatgttgctggtgcacctagattcaagcacaaaggaaaggtcatc
ctgtttgacctcacccctgaaggcgatgtcttgatcacacaggccctaaatggagaacag
attggctcatattttggcagcgaggtgtgcgtggtggatgtggatcaggatggaataaca
gatatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaactggcaaa
gtctatgtctactgtctagatggggatggctttgcccctaacggtacgctacattctcag
aagaaagcacaggatgcacgctttggttatgctatggctgtagcccctgacctaaatcat
gacggatatgccgacctgctcgtgggagctccgctagaggatgaccaccagggagctctt
tatatctaccatggcgatgaatactacatcatacctcagtacaaacagcgtatcccaggc
tcctctctctctccagggctgcagtattttggccgtagcctgagcgctctgttggatctg
gatggggatgagttagtggatcttgctgtgggagcacagggcactgccgtcctactgaag
tcacgcagtatagtgcagatcaatgtcagcctgtccttccagccacactccataaatgtg
atacagaagaattgctaccgggctggccgagactccgcatgccttaacgccacagtttgc
tttctggccctgtctcgctctcctggctcttatggcacatattttgatatgcagatgggg
gccatgttggatgacagaaagatcttggctcgtgctctgtttgactacagctcccagcgg
cagaccctaatgggcgtcatagttcgtgtgggggagaccatatgctacacgctaccattt
catgtctttgatacggctgattacatccgaccaatcagcttcactttgcgcttcaaaatc
aatgacacagagagcggcccggtactagatgagggctggccaacaacatttaagaagtct
atcccattcttcaaagactgtggggaggatgatgtgtgtgtaactgatctggttttacag
gcccatatggacatttctggaacaaggcagcaaccgtatgttatacgcagtcctcggcga
cggcttgcagtagaagtgcagctacaaaaccgactagaaaatgcctataacactagtctc
actcttcattactccaaaaacttgcatttcagcagtctgagtatacgggaagacgcccag
tttaagattgaatgtacagctctaggctcaaacagtcactcctgtaatgtcagttaccca
gtgttccgctctcagtcaaaggtgaacttcatgttggaatttgagttcagttgtacgtct
ctcatcagtaaggtccagatgaagcttattgcttccagtgacagtgtggagaatgaaggc
acactttcggacaacagtgttcagttacagagcattgtacagtatgaaccagatctcttc
ataacaagtgactccaacctaaaccgctatgaggttcacccgaccaggaccatatcagaa
ggaacaggacccgagttttacacacatttcaaggtgcagaatctgggctgttacgctgtc
agtaatgtggacctgagtgtcagtttgcccgccgtggcttcaggagaccgagttttcgca
actgtggttgatgcttcctttctaaattcttcaggtgtgaactgcagtatagtcagtgat
ctttctaaattaaagtccagtcagagagatgtacgtccacttcatccagaagacatgaag
aaaactgaacttttgaattgcacttcctcttggtgtgtggaggtggtgtgtcacatccag
cagctactgaagggagagacagccttagtccgaatcactaggaggatacaagacaacttc
ttcagacaggccaagtttaaagcagtgacaattgtgggctcgtaccagctgtctgctcga
gagtccagtctgatttcaatgggaaatgctgccctcgtgagggagacggttttggaagtg
ctgaaggggcgttcgatcccaatctctctctggattctgattggcagcatcattggagga
ctcctgcttcttgcactcttagtattcttcctttggaagttggggtttttcacaaggaaa
cagaggaaggatgaggatgagaacgatgacaactga
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integrated database retrieval system