KEGG   Labeo rohita (rohu): 127178896
Entry
127178896         CDS       T09007                                 
Symbol
itga10
Name
(RefSeq) integrin alpha-10
  KO
K06586  integrin alpha 10
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04510  Focal adhesion
lroh04512  ECM-receptor interaction
lroh04810  Regulation of actin cytoskeleton
lroh04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    127178896 (itga10)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    127178896 (itga10)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    127178896 (itga10)
   04810 Regulation of actin cytoskeleton
    127178896 (itga10)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:lroh04515]
    127178896 (itga10)
Cell adhesion molecules [BR:lroh04515]
 Integrins
  Integrin alpha subunits
   127178896 (itga10)
SSDB
Motif
Pfam: VWA FG-GAP Integrin_A_Ig_2 Integrin_A_Ig_1 Integrin_A_Ig_3 VWA_2 FG-GAP_3 ITGAX-like_Ig_3 FG-GAP_2 LapA_dom
Other DBs
NCBI-GeneID: 127178896
NCBI-ProteinID: XP_050988027
LinkDB
Position
16:complement(24162993..24219370)
AA seq 1171 aa
MEIHKYLLLLKITVLLKGLCECFNIDVKRPRIFSGPEDALFGFSVLQHENNGEKSILVGA
PWDGPQNNRKGDIYKCIVGDEINSNCSKVNLGENAFQNISRNLKNSHLGMTLTPAASDGF
LACAPLWSQECGTSLFSTGICASVTNDMEPKEVIAPTAQRCTTYMDIVIVLDGSNSIYPW
YEVQNFLSNILSKFHISPEQMQVGVLQYGEISVHEWSLRDYQTTQDVVEAAKNISRQEGR
ETRTAYAIQMACSEAFSPDRGAREGATKVMIVVTDGESHDGEDLPESLAECEKRNITRYA
IAVLGHYSRRQQDPETFINEIKYIASDPDEKYFFNVTDEAALNDIVDALGDRIFSLEGTL
GYNESAFLMEMSQIGFSTHILDDGILFGMVGAYDWEGGVLKESKEGQLKPSREAFEKEFP
LELKNHAAYLGYTVSSVVVGDWKRLYVAGAPRFKHKGKVILFDLTPEGDVLITQALNGEQ
IGSYFGSEVCVVDVDQDGITDILLIAAPMFLGAGNKETGKVYVYCLDGDGFAPNGTLHSQ
KKAQDARFGYAMAVAPDLNHDGYADLLVGAPLEDDHQGALYIYHGDEYYIIPQYKQRIPG
SSLSPGLQYFGRSLSALLDLDGDELVDLAVGAQGTAVLLKSRSIVQINVSLSFQPHSINV
IQKNCYRAGRDSACLNATVCFLALSRSPGSYGTYFDMQMGAMLDDRKILARALFDYSSQR
QTLMGVIVRVGETICYTLPFHVFDTADYIRPISFTLRFKINDTESGPVLDEGWPTTFKKS
IPFFKDCGEDDVCVTDLVLQAHMDISGTRQQPYVIRSPRRRLAVEVQLQNRLENAYNTSL
TLHYSKNLHFSSLSIREDAQFKIECTALGSNSHSCNVSYPVFRSQSKVNFMLEFEFSCTS
LISKVQMKLIASSDSVENEGTLSDNSVQLQSIVQYEPDLFITSDSNLNRYEVHPTRTISE
GTGPEFYTHFKVQNLGCYAVSNVDLSVSLPAVASGDRVFATVVDASFLNSSGVNCSIVSD
LSKLKSSQRDVRPLHPEDMKKTELLNCTSSWCVEVVCHIQQLLKGETALVRITRRIQDNF
FRQAKFKAVTIVGSYQLSARESSLISMGNAALVRETVLEVLKGRSIPISLWILIGSIIGG
LLLLALLVFFLWKLGFFTRKQRKDEDENDDN
NT seq 3516 nt   +upstreamnt  +downstreamnt
atggagattcacaagtacctgctgttgttgaagatcactgttcttctcaaagggctgtgt
gagtgttttaatattgatgtgaagaggccaaggatcttcagtgggcctgaagatgctctg
ttcggcttctctgtgttacagcatgagaacaatggagagaaatcaattctggttggtgct
ccatgggatggaccacaaaataacaggaagggggatatttacaagtgcattgtgggagat
gagataaattcaaattgctcaaaagtgaacctaggagaaaatgcatttcagaatatctct
cgaaatcttaaaaactctcatttggggatgacactgacccctgctgcttcagatggcttc
ctggcctgcgctccactatggtcccaggaatgtggtacatctctgttcagcacaggaatc
tgtgcgtctgtcaccaatgacatggagcccaaggaagtcattgcacccactgcccagaga
tgcacaacatacatggacatagtcattgttttagatggttctaatagtatctacccctgg
tatgaggtgcagaacttccttagcaacattctcagcaagttccacataagccctgagcaa
atgcaggtaggtgtcctgcagtacggggagatctcggtccatgagtggtctctcagggac
tatcagacaacacaggatgtggttgaagccgccaagaacattagtcgtcaagagggacgt
gagacccggaccgcgtacgccatccaaatggcctgctctgaggcttttagtccagataga
ggagcgagggaaggagccaccaaagtgatgatagttgtgacagatggagagtcccatgat
ggcgaagaccttcccgagtctcttgctgaatgtgagaaacgtaacatcaccagatacgcc
atcgctgtattaggtcactacagccgcagacagcaagacccagagacctttatcaatgag
attaagtacattgccagtgaccctgatgagaaatacttcttcaacgtgacggatgaggct
gctctaaatgacattgtagatgcattgggggatcgcatttttagtctagaggggaccctg
ggatacaatgaaagtgcctttctcatggagatgtctcagattggtttttcaacacacatt
ttggatgatggcatcttgtttggtatggtgggtgcatatgactgggagggaggtgtccta
aaggagagcaaagaagggcagcttaagccctcaagagaggcctttgagaaagagtttcca
ttggagctgaagaatcatgcagcctacctaggttacacagtgtcgtcagtggttgtgggt
gactggaagaggttgtatgttgctggtgcacctagattcaagcacaaaggaaaggtcatc
ctgtttgacctcacccctgaaggcgatgtcttgatcacacaggccctaaatggagaacag
attggctcatattttggcagcgaggtgtgcgtggtggatgtggatcaggatggaataaca
gatatcctgctcatagctgctcccatgttcctgggagcaggaaacaaagaaactggcaaa
gtctatgtctactgtctagatggggatggctttgcccctaacggtacgctacattctcag
aagaaagcacaggatgcacgctttggttatgctatggctgtagcccctgacctaaatcat
gacggatatgccgacctgctcgtgggagctccgctagaggatgaccaccagggagctctt
tatatctaccatggcgatgaatactacatcatacctcagtacaaacagcgtatcccaggc
tcctctctctctccagggctgcagtattttggccgtagcctgagcgctctgttggatctg
gatggggatgagttagtggatcttgctgtgggagcacagggcactgccgtcctactgaag
tcacgcagtatagtgcagatcaatgtcagcctgtccttccagccacactccataaatgtg
atacagaagaattgctaccgggctggccgagactccgcatgccttaacgccacagtttgc
tttctggccctgtctcgctctcctggctcttatggcacatattttgatatgcagatgggg
gccatgttggatgacagaaagatcttggctcgtgctctgtttgactacagctcccagcgg
cagaccctaatgggcgtcatagttcgtgtgggggagaccatatgctacacgctaccattt
catgtctttgatacggctgattacatccgaccaatcagcttcactttgcgcttcaaaatc
aatgacacagagagcggcccggtactagatgagggctggccaacaacatttaagaagtct
atcccattcttcaaagactgtggggaggatgatgtgtgtgtaactgatctggttttacag
gcccatatggacatttctggaacaaggcagcaaccgtatgttatacgcagtcctcggcga
cggcttgcagtagaagtgcagctacaaaaccgactagaaaatgcctataacactagtctc
actcttcattactccaaaaacttgcatttcagcagtctgagtatacgggaagacgcccag
tttaagattgaatgtacagctctaggctcaaacagtcactcctgtaatgtcagttaccca
gtgttccgctctcagtcaaaggtgaacttcatgttggaatttgagttcagttgtacgtct
ctcatcagtaaggtccagatgaagcttattgcttccagtgacagtgtggagaatgaaggc
acactttcggacaacagtgttcagttacagagcattgtacagtatgaaccagatctcttc
ataacaagtgactccaacctaaaccgctatgaggttcacccgaccaggaccatatcagaa
ggaacaggacccgagttttacacacatttcaaggtgcagaatctgggctgttacgctgtc
agtaatgtggacctgagtgtcagtttgcccgccgtggcttcaggagaccgagttttcgca
actgtggttgatgcttcctttctaaattcttcaggtgtgaactgcagtatagtcagtgat
ctttctaaattaaagtccagtcagagagatgtacgtccacttcatccagaagacatgaag
aaaactgaacttttgaattgcacttcctcttggtgtgtggaggtggtgtgtcacatccag
cagctactgaagggagagacagccttagtccgaatcactaggaggatacaagacaacttc
ttcagacaggccaagtttaaagcagtgacaattgtgggctcgtaccagctgtctgctcga
gagtccagtctgatttcaatgggaaatgctgccctcgtgagggagacggttttggaagtg
ctgaaggggcgttcgatcccaatctctctctggattctgattggcagcatcattggagga
ctcctgcttcttgcactcttagtattcttcctttggaagttggggtttttcacaaggaaa
cagaggaaggatgaggatgagaacgatgacaactga

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