Labeo rohita (rohu): 127178908
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Entry
127178908 CDS
T09007
Symbol
kcnn3
Name
(RefSeq) small conductance calcium-activated potassium channel protein 2 isoform X1
KO
K04944
potassium intermediate/small conductance calcium-activated channel subfamily N member 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127178908 (kcnn3)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Potassium channel, calcium- and sodium-activated (KCa/KNa)
127178908 (kcnn3)
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Gene cluster
GFIT
Motif
Pfam:
SK_channel
CaMBD
Ion_trans_2
Ion_trans
DUF6775
DUF7310
Motif
Other DBs
NCBI-GeneID:
127178908
NCBI-ProteinID:
XP_050988044
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Position
16:complement(19995691..20081413)
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AA seq
775 aa
AA seq
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MDPPPSLSLALLSGSEDEEQRLPLPLGGLSHASLSGNYPGTNHSNHTGGNSSLERLNGTP
SPTTPNLPPASLPKLPLSTTPQLSTPIPNALHPTSTPLSSCLGSQHSLSGETSPVYNALF
YSSHSPSTERERERERERGCKHRQASPLVHRRDSNPFTEIAMSSCKYSGGVMKPLSRLSA
SRRNLIESDSGSDTKEGGASASQATAASSQHSQSQSQNPPEIVISSKEDPPYGHAYELEA
SANQMSIYHQNHALSESRGVLGGVAGGGTNGRRGGAVVGGPGRTASKAPKRKNQNIGYKL
GHRRALFEKRKRLSDYALIFGMFGIVVMVIETELSWGVYSKSSMYSLALKCLISLSTVIL
LGLIIAYHAREVQLFVIDNGADDWRIAMTMERVLLIALELIVSAVHPVPGDFKFMWRARL
AFSYAPSQAEADLDMVLSVPMFLRLYLIARVMLLHSKLFTDASSRSIGALNKVHFNTRFV
MKTLMTICPGTVLLVFSISLWIIAAWTVRVCERYHDAQDVTSNFLGAMWLISITFLSIGY
GDMVPHTYCGKGVCLLTGIMGAGCTALVVAVVARKLELTKAEKHVHNFMMDTQLTKRIKN
AAANVLRETWLIYKHTKLMKKIDHSRVRKHQRKFLQAIHQLRSVKMEQRKLSDQANTLVD
LSKMQSVMYELMSELNDRSEDLERQMLSLEQRVEQLTAGFNALPAHLSATLSAQHAALVQ
LLRERDAKVLSPTVPSALSPTAASLPLANPPSGSGSAPVPTQPTEDSPNTSSSSC
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggatccccctccctctctgagtctggcccttctcagtgggagtgaagacgaagagcaa
cgtctgcccctccccctcggtggtctctcccatgcctccctttcaggcaactaccctggg
accaaccactcgaatcacacgggaggcaacagcagcctggagcgtctcaatggcactccg
tcgcccaccacgccgaaccttcccccggcatcgctgcccaagttgcccctgtccacgacg
ccccagctgtccacgccaatccccaacgcgctccaccccaccagcacgccgctctcctcc
tgcctgggcagccaacatagcctgagcggggagacgtcgcccgtctacaacgcgttgttc
tactcctctcattcgccttccaccgagcgcgagcgggagagggagcgcgagaggggatgt
aagcaccggcaggccagtcccctggtgcacaggcgggacagtaacccctttaccgagatc
gccatgagctcgtgcaagtacagcggcggcgtgatgaagccgctcagccgcctcagcgcc
tcccgccggaacctcatcgagtctgacagcggaagtgacaccaaagagggcggggcgagc
gcgagccaggcgaccgcggcctcctctcaacacagtcagtcccaatcccagaacccccca
gagatcgttatctcctcgaaagaggatccgccttacggacacgcttacgaactcgaggcc
tcggccaatcaaatgtccatctaccaccagaaccacgccctctctgagagcaggggtgtg
ctggggggcgtggcagggggcgggactaatggacggaggggcggtgctgtcgtgggaggg
ccggggaggaccgcttccaaggcccctaaacgtaagaatcagaacattggctacaaacta
ggccacaggagggcgctgttcgaaaagaggaagagacttagtgactatgcgctcatattc
ggcatgtttggcattgttgtcatggtgattgagaccgagctgtcctggggtgtctacagt
aagagctccatgtattcactggcattgaagtgtcttatcagcctttccaccgtcattctt
cttggactaatcatcgcttaccatgctcgagaggtgcagctcttcgtcattgacaacggt
gcggacgactggcggatcgccatgaccatggagcgagtgctgcttatcgctctggagctg
atcgtttcggcggttcacccggtgccgggggacttcaagttcatgtggcgggcgcggctg
gccttctcctacgctccctcgcaggcggaggcagatctagacatggtgctgtctgtaccc
atgtttcttagactctacctcatcgcccgagtcatgctgctacatagcaagctcttcacc
gacgcctcctcccgcagcataggggcactcaacaaggtgcactttaacacacggtttgtg
atgaagaccctgatgaccatatgcccaggcacggtgctgctggttttcagtatctccctg
tggatcatcgctgcctggaccgtaagagtgtgtgagaggtaccacgatgctcaggatgtg
accagcaattttttgggtgcaatgtggctcatctctatcaccttcctctccattggatac
ggagacatggtgcctcacacctactgtggcaagggagtgtgtctgctcacaggaattatg
ggagcaggatgcactgcattggttgttgccgtggtagccagaaagcttgaattgacaaag
gcggagaagcatgtgcacaacttcatgatggacacacagctcaccaaacggataaagaac
gcagcggcgaatgttctacgagagacttggctgatatacaagcacaccaaactgatgaag
aaaattgaccattcccgcgtacgcaagcatcagaggaagttcctccaagccattcaccaa
ctgcgaagtgttaaaatggagcagagaaaactcagtgatcaagccaacactctggtggac
ttatcaaagatgcagagcgtcatgtatgagctgatgtctgagctgaacgaccgcagtgag
gatctggagaggcagatgttaagtctggagcagcgggtggagcagctgacggccggcttt
aacgctctgcccgctcatttgtcggccacgctcagcgcccagcacgccgcgctcgttcaa
ctgctgcgcgagcgtgatgccaaggtcctgagccccactgtgccctctgcgctctcaccc
accgctgccagcctgcctctagccaaccccccctccggctccggctccgcacccgtcccg
actcagcccaccgaggacagtcccaacaccagcagctccagctgctga
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