Labeo rohita (rohu): 127178969
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Entry
127178969 CDS
T09007
Symbol
vars1
Name
(RefSeq) valine--tRNA ligase
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127178969 (vars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lroh01007
]
127178969 (vars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127178969 (vars1)
Enzymes [BR:
lroh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
127178969 (vars1)
Amino acid related enzymes [BR:
lroh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127178969 (vars1)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
127178969 (vars1)
Prokaryotic type
127178969 (vars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
GST_C
tRNA-synt_1_2
Val_tRNA-synt_C
GST_C_2
Arc1p_N_like
Jag_N
tRNA-synt_1e
GST_C_3
Motif
Other DBs
NCBI-GeneID:
127178969
NCBI-ProteinID:
XP_050988139
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All DBs
Position
16:21859860..21878220
Genome browser
AA seq
1273 aa
AA seq
DB search
MDTLYISSHPDDFRSLLPLIAAEFCRSPPRIVHEDPPAEVARSRPALVIAGAGGTVLTGA
SAVSWYLAKAGNRTGSDKQQESQVWQWLSFAENELMPVACAVTFPLLGIMGVDKKLQQSS
RAELLRVLKAVDETLAPRTFLVGESVTLADMAVAVAALLPFKYALEPADRKSLVNVTRWF
NTCVNQPQFLKVLGKISLCEKMVPVTPKPSAAVSATPTAASEAATPDGASANGPPKTEAQ
LKKEAKKREKMEKFQQKKEMEEKKKMQPQAEKKAKPEKKELGVITYNIPTSPGEKKDVLS
PLPDSYSPQYVEAAWYTWWEKQGFFKPEYGRKNVSEPNPRGMFMLCIPPPNVTGSLHLGH
ALTNAIQDCLTRWHRMRGETTLWNPGCDHAGIATQVVVEKKLMKERKLSRHDLGRENFIQ
EVWKWKNEKGDRIYHQLRKLGSSLDWDRACFTMDDKLSYAVQEAFIRMHEEGVIYRSKRL
VNWSCTLNSAISDIEVDKKELTGRTLLPVPGYKEKVEFGVLVSFSYKVEGSDEEVVVATT
RIETMLGDTAVAVHPNDSRYQHLKGKMVVHPFCDRKMPIVFDDFVDMNFGTGAVKITPAH
DHNDYEVGERHKLPFVNILDENGLLINVPPPFLGMKRFEARKAVLQALKDLGQFKEVKDN
PMVVPVCSRSKDIVEPLMKPQWYVDCREMGKQAADVVRNGELKIIPDHHLKTWFNWMDNI
RDWCISRQLWWGHRIPAYFVTVNDPSVKPGEDMDGHYWVSGRSVEEAREKAAKRFNVTAD
KISLRQDEDVLDTWFSSGIFPFSIFGWPNESEDLRVFYPGTLLETGHDILFFWVARMVMM
GLKLTGKLPFKEVYLHAVVRDAHGRKMSKSLGNVIDPLDVITGITLEGLHAQLADSNLDP
LEVEKAKQGQKSDYPSGIPECGTDALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNA
VKFAMRTLGEGFVPWEKAQLCGSESVSDRWILSRLSAAVALCDGGFQAYDFPTITTAIYN
FWLYELCDVYLESVKPVLSKTDSEGQKQADICRQTLYTCLEVGLRLLSPLMPFVTEELFQ
RLPRRRAQDSPPSICVTPYPETSEFCWHSEDIDRQMEFVMSVVKTIRSLRADYNLTKTRA
DCYLQCIDADTAALVQTYSLQIQTLSYSQAIYPVVGGDSTIPQGCAVAIASDKCTVHLML
KGLIDLEKEVTKLTAKKGELEKQMEKMKEKMAKNDYKEKVPVKVQEADAEKLRQNETELQ
KVKEAIENFRKMM
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggacactctatacatctcttcccaccctgatgacttcaggagtttgttgcccttgatc
gctgctgaattctgtcgatctcctccacgaatcgttcatgaggatcctccggctgaggtg
gccagatctcgtcctgccctggtcatagctggtgcggggggcaccgtgctcacaggtgcc
agtgctgtgagctggtacctggcaaaagcgggcaaccggacaggcagtgacaaacagcaa
gagagtcaggtgtggcaatggctgagcttcgctgagaacgagctgatgccggtggcctgt
gctgtgacattccctctactggggatcatgggggttgataagaagctgcagcagagttcc
agagcagagctgctgcgtgttctcaaagctgtagatgagacactagcgccgcggacattc
ctcgtaggagagagtgtgactttggcggatatggctgttgctgtggcagcactcctgcca
ttcaaatatgcgttggagcctgcagacaggaagtcactggtgaatgtgaccagatggttt
aatacctgcgtgaaccagccacagttcctgaaggtgttgggtaaaatctcactgtgtgag
aaaatggtgcctgtgacacccaaacctagtgctgctgtcagtgccacaccaactgctgct
tctgaagcagctacaccagatggcgcatctgctaacggtcctcctaaaacggaggctcag
ctgaagaaagaggccaagaagcgagaaaagatggaaaagtttcaacagaagaaagagatg
gaagagaagaagaagatgcagcctcaggctgagaaaaaggccaaaccagagaagaaagaa
ctgggtgtgatcacctacaacatccccacgtcgcctggagagaaaaaagatgtcctgagt
cctctgcctgattcttatagtccacagtatgtagaagcggcctggtacacctggtgggag
aaacagggttttttcaagcctgaatatgggaggaagaatgtaagtgagccaaacccacgt
ggaatgttcatgttgtgtattcctccgcctaatgtgaccggatctcttcaccttggtcac
gccttgaccaatgctattcaggactgcctgacacgatggcacaggatgagaggagagacc
acactgtggaatcccggctgcgatcacgctggtatcgccacacaggttgtggtggagaag
aaactgatgaaagagcgaaagctgagcagacatgatctggggagagagaacttcatccag
gaggtctggaagtggaagaacgaaaagggagatcgcatctatcatcaactgaggaagctg
ggctcttctctggactgggacagagcttgttttaccatggatgataaactatcgtatgcg
gtccaggaggcgtttatacgtatgcatgaggagggtgtgatctacaggagcaagagactc
gtcaactggtcctgcaccctcaactctgccatctctgacatagaagtcgataaaaaggag
ctgacggggcgaactcttcttcctgtgcctggttacaaagagaaggttgagtttggagtc
ctggtgtccttctcttacaaggtcgaaggatcagatgaggaggttgtagtggccaccaca
cgtattgagacgatgcttggagacacagctgttgccgtccatcctaatgactccagatat
cagcatctcaaaggaaagatggttgttcacccattctgtgacagaaagatgcccatcgtg
tttgatgactttgtggatatgaactttggaacaggtgctgtgaagatcactcctgctcat
gatcataatgattatgaggtgggagagaggcacaaacttcccttcgtcaacatcctagat
gaaaacggcctcctcatcaacgttcctcctccattcctgggaatgaagcgctttgaggcg
aggaaagctgtgcttcaggctctgaaagacttaggccagtttaaggaggtcaaagacaat
cccatggtggtgcccgtctgcagccgttctaaagacatagtggagcctctcatgaagcct
cagtggtacgtggactgcagagagatgggaaagcaggccgcagatgtcgtcagaaacgga
gaactcaagatcatccccgaccaccacctcaaaacctggttcaactggatggacaacatc
agggactggtgcatttctcgccagttgtggtggggtcacaggataccagcgtactttgtg
actgtgaatgatccgtctgtcaaaccaggcgaggatatggacggacattattgggtcagc
gggagatcagtggaagaagccagagaaaaagctgccaaacgcttcaatgtcactgcagac
aaaatctctctgcgccaggatgaggatgtgttggacacttggttctcctcagggatcttc
cccttctccatctttggctggcccaatgagtcagaggatctgagagtcttctacccaggc
acactgttagagacgggccatgatatcctgttcttttgggtggctcgtatggtcatgatg
ggcctcaaactcactggaaaactacctttcaaagaggtgtatctgcatgcagtggtacgg
gatgcccatggcaggaaaatgagcaagtctctcggtaacgtcatcgaccctctggatgtc
atcactggcattacactggagggtcttcatgctcagctagcggacagcaatctagaccct
ctggaggttgagaaggccaaacagggacagaaatccgattatcccagcggaattccagaa
tgcgggacagatgcgcttagatttgctctgtgtgcttataccagtcaaggccgagacata
aatctggatgtgaacaggattctgggatacaggcatttctgtaacaagctgtggaacgca
gtgaagtttgccatgaggactctgggagagggatttgtgccctgggagaaagctcagctg
tgcggcagtgaaagtgtgtctgaccgctggattctgtcccgtctgagtgcagcagtagcg
ctgtgtgatggcggatttcaggcctacgattttccgacaatcaccacagccatctacaac
ttctggctgtacgagctctgcgatgtctatctggagagtgtgaagccagtgttgagcaag
acagactcagagggacaaaagcaggcggacatctgcagacagactctctacacctgtttg
gaagtgggactccgtctcctgtctcctctcatgccttttgtgactgaagagctgttccag
cggttgccaagaagacgtgctcaggacagccctcccagcatctgtgtcacaccttatcca
gaaacatcagagttctgttggcacagcgaggacatcgaccggcagatggagtttgtcatg
tctgtggtcaaaaccatccgttcactcagggctgattataacctcaccaagacccgtgct
gattgctatctgcagtgcatagacgctgatactgctgctctggtccagacatacagtctt
caaatccagacactctcttactctcaggctatttacccagtggtagggggcgacagcacc
atcccacaaggctgtgcggtggccatcgcctcagataaatgcactgttcacctcatgctg
aagggtttgatcgacttggaaaaggaggtcactaaactgacagcaaagaaaggtgagctg
gagaagcagatggaaaagatgaaggaaaagatggccaagaacgactacaaggagaaagtt
cctgttaaagtgcaggaggcagatgctgagaagctgaggcagaatgaaacagaactgcag
aaagtgaaggaagccatcgagaacttccgaaaaatgatgtaa
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integrated database retrieval system
