Labeo rohita (rohu): 127178977
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Entry
127178977 CDS
T09007
Symbol
ptprub
Name
(RefSeq) receptor-type tyrosine-protein phosphatase U isoform X1
KO
K16662
receptor-type tyrosine-protein phosphatase U [EC:
3.1.3.48
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127178977 (ptprub)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lroh04515
]
127178977 (ptprub)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
127178977 (ptprub)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
127178977 (ptprub)
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
Type II RPTP family
127178977 (ptprub)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
Fn3_PTPRU
MAM
fn3
PTP-SAK
DSPc
Ig_DSCAM-DSCAML_C
Tc-R-P
Pur_ac_phosph_N
Ig_2
Ig_3
PTPlike_phytase
Y_phosphatase3
I-set
ig
Spore_III_AB
Motif
Other DBs
NCBI-GeneID:
127178977
NCBI-ProteinID:
XP_050988146
LinkDB
All DBs
Position
16:12147951..12436174
Genome browser
AA seq
1450 aa
AA seq
DB search
MNTCAFLLILAVQIHADSVEGPTAGCTFDEDSDPSLCEFSQGEEDDFDWQLFRAHASPHS
TSDLLRGSYMMVNSSQHAAGQRAQLLLQTLSENDTHCVQFSYFLYSRDGHSPGALRVYVR
VNGGPLGIPVWNVSGSRGRQWHQVELAVSTFWPNEYQILLEATVDRKGYIAVDDILLLNY
PCYKAPHFSRLGDVEVNAGQNATFQCVAAGRPNEAEKFLLERHNGEVSSGGSVKHLGRNR
FSVSFQLEDVQKPEQDLYRCVTQSSRGSGVSNYAELIVKVPPSPIAPPQLLRAGSTYLII
QLNTNSILGDGPIIRREIEYRASQAPWSEILGVNMVTYKLWHLDPDTEYHISVLLTRPGE
GGTGPPGPPLISRTKCAEPMRALRGLRASEIQSRQLTLQWETPAFNLTRCHTYSVSLCYR
YTTAGGGGGHNTTVRECLAVEHNTSRFTLRDLPPFHTIQIRLALANTEGKKEGKEVMFQT
EEDIPGGIAPESLTFTPLEDMIFLKWEEPVEPNGLITQYEISYQSIESSDPGINVPGPRR
TVSKLRNETYHMFSNLHPGTTYLISVRARTAKGFGQTALTEITTNISAPTFDYGDMPSPL
SETESTITVLLRPAQGRGAPVSTYQVIVEEEAGRKVKRELGVQDCFPIPTSHGEAQARGA
PHYYTAELPPSSLPEATPFTVGDNHTYNGYWNSPLDPRKNYLIYSQAMSNFRGETRINCI
RIARKAACKDHQRALEVTQRSEEMGLILGVCAGGLVVLILLLGAIIIIIKKGRDYYSYSY
YPRKPVNMNKTPITYRQEKSNMMGSMERSFTDQSTLQEDERMALSFMDTHTCSTRSDPRS
SMNESSSLLGGSPRRQCGRKGSPYHTGQLHPAVRVADLLQHINQMKTAEGYGFKQEYESF
FDGWDINKKKDKTKGRHDTLMGYDRHRVKLHPLLGDPNSDYINANYIDIRINREGYHRSN
HFIATQGPKQETVYDFWRMVWQENCFSIVMITKLVEVGRVKCCKYWPDESEMYGDIKITL
LKTETLAEYTVRTFALERRGYSAKHEVCQFHFTSWPEHGVPYHATGLLAFIRRVKSSTPL
DAGPVVVHCSVGAGRTGCYIVLDVMLDMAECEGVVDIYNCVKTLCSRRINMIQTEEQYIF
IHDAILEACLCGETAIPVNEFALAYKEMLRVDSQSNSSQLREEFQTLNSVTPHLDVEECS
IALLPRNREKNRSMDVLPPDRALAFLVTTEGESNNYINAALMDSFHRPAAFIVTPHPLPG
TTSDFWRLVFDYGCTSVVMLNQLNQSNSAWPCVQYWPEPGLQQYGPMQVEFLSMSADEDI
ITRLFRVKNVTRLQEGQLVVCQFQFLRWSAYRDVPDSKKAFLNLLASVQKWQRECGEGRT
VVHCLNGGGRSGTYCASNILMEMIQYQNMVDVFYAVKTLRNAKPNMVETLEQYRFCYELV
LEYLDCLEVR
NT seq
4353 nt
NT seq
+upstream
nt +downstream
nt
atgaatacctgcgcatttctcctgatcctggctgttcagattcacgccgacagcgttgag
ggaccaacagcgggctgcacgtttgatgaggactccgaccccagcctgtgcgagtttagc
caaggggaggaggatgactttgattggcagctgttccgcgctcatgcctcgccacactcc
acctctgatctcctgcgcggctcctacatgatggtcaactcctcccagcatgcagcgggg
cagagggctcagcttctgctgcagacgctaagtgaaaacgacacgcactgcgtgcagttc
agctacttcctgtacagcagagacggccacagcccgggggcgctgcgggtttatgtgcgg
gtcaatggtgggccgcttggcattcccgtgtggaacgtttctggctcgcgaggacgacag
tggcaccaggtggaactggcagtcagcactttctggccaaatgagtaccagatactgcta
gaggcgactgtggaccgcaaaggctacattgcagtcgatgacatcctcctattgaactac
ccctgttataaagcccctcatttttcccgtctgggggatgtggaggtcaacgctggacaa
aatgccactttccagtgtgtggcagctggacgtcccaatgaagcagagaagttcctgctg
gagcggcacaatggtgaagtgtcttcaggtggttctgtcaagcacttgggccgcaaccgc
ttctcagtgtcctttcaactggaggacgtccagaagccagagcaggacctctatcgctgc
gtcacgcagtcctccagaggctccggcgtctccaactacgctgaactcattgtcaaagtt
cccccatctcccattgctccaccccaactgttgagagcgggctcaacgtatttgatcatt
caactaaacacaaattccatattgggcgatggccccatcatacgtcgggaaatcgaatat
cgggccagccaggcaccttggtcggagatcctcggagttaacatggttacctataagctc
tggcacttggatccagatacagagtaccatatcagcgtgctgctcacccggccaggcgag
ggtgggacggggccacccggaccacccctcatcagcagaaccaaatgtgcagagcccatg
cgggcactgcgtggtcttagagcctcggagatccagtcccggcagctgaccttgcagtgg
gagacgccggccttcaacctgacccgctgccacacgtattcggtctccttgtgctaccgc
tacacaaccgcagggggcggcggcggtcacaacaccacggtgagagaatgtctggctgtg
gagcacaacacttcacgcttcaccctcagagatctgcctccttttcacaccatccaaata
cgcctggcgctcgccaacaccgagggcaagaaggaagggaaggaggtcatgtttcagact
gaggaggacattcccggaggcattgctcccgagtctcttaccttcacgccactggaagat
atgatctttctaaagtgggaggagccggtagaacccaacggcctcatcacgcagtacgag
atcagctaccagagcattgaatcatcagaccccgggatcaacgttccaggcccgaggcgc
acagtatccaaactgaggaacgagacgtaccatatgttctccaacctgcatcctggcacc
acctacctgatctctgttcgggcgcgcaccgccaaaggcttcggccaaacagctctcact
gagatcaccaccaacatctctgcacctacgttcgattatggagacatgccgtcccctctg
agtgagacagaaagcaccatcacagtccttctgcgtccagcacaagggcgaggagctccg
gtcagcacgtatcaagtgattgtagaggaggaagctggtaggaaggtgaagagagaacta
ggtgttcaagactgcttcccaattcccacatctcacggagaggctcaggcccgtggtgct
ccacactactacacagccgaacttcctccaagcagcctgcctgaggctacaccctttact
gtgggggacaaccacacctacaacggctactggaacagccctctggatcccaggaagaac
tacctcatctattcccaggccatgagcaactttagaggcgaaacaaggataaactgcatc
cgcatcgcccgtaaagccgcctgtaaagaccatcagcgagctcttgaggtcacgcagcgc
tcggaggagatggggctcatcctaggagtgtgcgctggtgggctagtggtcctgatactg
ctactgggggccattatcataatcattaaaaaaggaagggattactactcatactcttat
tatcctaggaagccggtgaacatgaataagacccccattacgtacaggcaggagaagagt
aatatgatgggctccatggagcgcagtttcactgatcagagcactctccaggaggacgag
aggatggccttgtcatttatggacacccatacgtgcagcactcgaagtgacccacggagc
tctatgaatgagtccagcagtctgctgggcggatcgcctagacgtcagtgtggccgtaaa
ggatcgccctatcacacgggtcagcttcacccagcagtgcgcgtggctgacctcctacaa
cacatcaaccagatgaaaacagcagaaggttacggctttaaacaggagtatgagagcttc
tttgatggctgggatatcaataagaagaaggataaaactaagggaaggcacgatacccta
atgggttacgaccgtcacagggtgaaactgcacccgctgctcggtgatcccaactctgac
tatatcaacgccaattacatcgatattcggataaacagggaaggttaccatcgatccaac
cacttcatcgccactcaggggcccaagcaggagacagtgtatgatttttggaggatggtt
tggcaagagaactgctttagcatcgtcatgatcaccaagctagtggaggtgggcagggtg
aaatgctgtaagtattggccagatgagtcagagatgtacggagacattaagatcacactg
ctgaagaccgaaactctggcggagtacacagtgcgaacttttgccctggagcggagagga
tactccgccaaacacgaagtgtgtcagtttcactttacatcatggcctgagcatggagtc
ccataccatgccacgggtctgctagccttcattcggcgggtcaaatcctccacaccactc
gatgcagggcctgtggtggtccactgcagtgtgggagcaggcaggaccggctgctatatc
gtgctggatgtaatgctggacatggcggagtgtgaaggagtggtggacatctacaactgt
gtgaagaccctctgctctcgccgcatcaacatgattcaaacagaggagcagtacatattc
attcacgatgccatcctggaggcgtgcctgtgtggggagaccgccatcccagtaaacgag
ttcgccctggcttacaaagagatgctgagggtggattctcagagcaactcttcacagcta
cgagaggagttccagacgctaaactctgtgactcctcatctggacgtcgaggagtgcagc
atcgccctgttaccgcgaaaccgcgagaagaaccgcagcatggacgttctcccacccgac
agggccctcgccttcctggtgaccaccgagggggagagtaacaactacattaacgcggca
ctgatggatagtttccaccggcctgctgccttcatcgtaacccctcacccgctgcccggc
acgacctctgacttttggaggctggtgtttgactacggctgcacctctgtggtcatgctg
aatcagctgaaccaatcgaactcagcctggccttgtgtgcagtactggcctgaaccaggt
cttcagcagtatggtcctatgcaagtggagtttctgtccatgtctgcagatgaggacatc
atcacccggcttttccgggtcaaaaacgtgacaagactgcaggagggtcagctggtcgtg
tgccagttccagttcctccgctggtctgcatatcgtgacgtgcctgattctaaaaaggcc
tttctcaacctgctggccagcgtgcagaagtggcagagggagtgtggggaaggccgtaca
gtagtccactgcctgaacggtggtggccgcagcggaacgtactgtgccagcaacatcctg
atggagatgatccagtaccagaacatggtggacgtcttctatgccgtcaagacccttcgt
aatgctaagcccaacatggtggagacactggagcagtatcgtttctgttatgagctggtt
ctggagtatttggactgcttggaggtcagatag
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integrated database retrieval system
