Labeo rohita (rohu): 127179052
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Entry
127179052 CDS
T09007
Symbol
nop2
Name
(RefSeq) probable 28S rRNA (cytosine(4447)-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lroh03009
]
127179052 (nop2)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
127179052 (nop2)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
127179052 (nop2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
127179052
NCBI-ProteinID:
XP_050988260
LinkDB
All DBs
Position
16:complement(27330318..27341278)
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AA seq
716 aa
AA seq
DB search
MGRKLDSTTKVKRGPGRKARKQKGAETELAKFLVNDDEPKKLSSRAKKRAIKRAQVSKVP
KQEEKPKKGFSDENNKWLKPAQRKRKIEQSEEEEDSDSQWEEDDDDDEEGLVQQQMEEED
DDDEDMVDDYGAEEQDSDGEELLPIEKAARKQKKQTSLKPESDEEEDDDDDDEDDDEKGD
LDEDDDEEEEEDDTVQANIDETEQFKLPGAADRAKEGLLPMDLQTIHQRIKDNVDVLSHF
SEKREEGKERSEYISLLCSDLCTYYSYNEFLISKLMDLFPLSELVDFLEANEIQRPVTIR
TNTLKTRRRDLAQALINRGVNLDPLGKWTKVGLVIYDSSVPIGATPEYLAGQYMLQGASS
FLPVMALSPQEGESVLDMSAAPGGKTTYMAQLMRNTGMIVANDASADRLKSVVGNIHRLG
VTNAVICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPGVKTGKDEADILRSAHLQKE
LLLSAIDSVNADSPTGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVPTGLDFGKEGFTR
FKERRFHPTLKLSRRFYPHSHNMDGFFVAKLKKLSNTVPTTPKETENEAESTNMQTAASS
EQIQKPESKRQKPASTPEKSNMGKKQKLEKKKSDGPKKAKIAKLDGEASKKSEKPKKQKV
KELNGDSTKEVGKEKKKGSQSEKKNKNKTKKLVNKNKKRMGKNRFRKLKSMLGKAK
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atggggaggaagttggattccaccactaaggtgaaaagaggaccaggacgtaaggccaga
aaacagaagggagcagaaacagagctggccaagtttttggttaatgatgatgagccaaaa
aaactttcaagccgagcgaaaaaacgagctataaaaagagctcaagtgtccaaagtaccc
aaacaagaggaaaagcctaaaaagggattctcagatgagaataataaatggctaaaacca
gcacaaaggaagcgaaagattgaacaatctgaggaagaagaagacagtgacagccaatgg
gaagaagatgatgatgatgatgaagagggccttgttcaacagcaaatggaggaagaggat
gatgatgatgaagatatggttgatgactatggtgctgaagaacaagacagtgatggagaa
gagcttctgccaattgagaaagctgcaagaaaacagaaaaaacaaacaagcttgaaacca
gagagtgatgaggaggaagatgatgacgacgatgatgaggatgatgatgaaaagggtgat
ttagatgaagatgatgatgaggaggaggaggaagatgatactgtacaggcaaatattgac
gagactgaacaatttaaactccctggtgcagctgatagagcaaaggagggtcttttaccg
atggacctacagaccatccatcagaggatcaaagataatgtggatgtgctgtctcacttc
tctgagaagagagaagagggcaaggagaggtcggagtatatctctctgctgtgctctgac
ctctgcacctactacagctacaacgagttcctcattagtaaactcatggaccttttcccg
ctctctgagctggttgattttctggaggccaatgaaattcaaaggccagtcaccatcaga
accaacaccctgaaaaccaggaggagagacttggctcaggctctgattaacagaggagtg
aatctggatccattggggaaatggaccaaagtggggctggttatctacgactcttctgta
cccataggagcaactccagaatatttggcaggccagtacatgttgcaaggtgcatcatcg
tttctgcctgtaatggcgctttcgccccaggagggggagtccgtgctagacatgagtgcc
gctccaggaggcaagaccacatatatggctcagctaatgaggaacacaggcatgattgtg
gctaacgacgcaagtgcagacagactgaagagtgtggtgggaaacatccatcgtctcggt
gtcacaaacgctgtcatctgcaactatgacggcagacagttcccaaaggtgatgggaggt
ttcgatagagtgcttttagatgctccttgttcgggtacaggagttatctccaaagatcca
ggagtaaaaaccggcaaggatgaggctgatattcttcgctcagctcacctgcagaaggag
ctcctcctgtctgctattgactctgtcaatgctgattctccaactggcggataccttgtt
tactgcacatgctccattatggtagaggagaatgagtgggtggtggattatgctttgaag
aagagaaatgtaaagctggtccccactggactcgactttggcaaggagggattcaccaga
ttcaaagaaagacgttttcatcccactctcaaattgtctcgccgattctaccctcactcc
cacaacatggatggattttttgtggccaagctgaagaagctgtctaacaccgtccccacc
acaccaaaagaaacagaaaatgaagcagaatctacaaacatgcagaccgcagcctcgtcg
gagcaaatccaaaagccagaatccaagcgacagaagcccgcttcaactccagagaaaagc
aacatgggcaagaagcagaaattagaaaagaagaaatctgatggtcccaaaaaggccaaa
attgctaagttggatggtgaagcatccaaaaagagtgagaaacctaaaaagcagaaggtt
aaggaactgaatggagattcaacaaaagaagtaggcaaggagaagaaaaaggggagccag
tctgagaagaaaaacaaaaataaaacaaagaagctggtaaataagaacaaaaaaagaatg
gggaaaaacaggtttaggaagttaaaaagtatgcttgggaaagcaaagtag
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