Labeo rohita (rohu): 127179107
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Entry
127179107 CDS
T09007
Symbol
sall3a
Name
(RefSeq) sal-like protein 3
KO
K19871
sal-like protein
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127179107 (sall3a)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127179107 (sall3a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127179107 (sall3a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
127179107 (sall3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2
zf-C2H2_4
zf-H2C2_2
zf-C2H2_jaz
zf-met
zf-C2H2_15
zf-C2H2_6
TDBD
IZUMO
UBZ_FAAP20
zf-H2C2_5
Motif
Other DBs
NCBI-GeneID:
127179107
NCBI-ProteinID:
XP_050988351
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All DBs
Position
16:32625333..32648932
Genome browser
AA seq
1317 aa
AA seq
DB search
MSRRKQAKPQQLRSDEDPSLLELLPEHVSGEGLDDSDSGNESRSGSEETHVCEKCCAEFF
KWSDFCEHLKTCTKNPLVLIISDNEVTSDQAQDYLPEPSPMPSCSSEPADSDDAVEESHM
HADSVEGAEMMLDPDAVLEKEHEPMEVELSPEKPINSDEQVTLAEPDISLPQHEDHKQSS
GAGYTIPSTNVTLETLHGTRVAVAQFSQDAREALAGEVSTMAIPMILDQLMALQQQQLHQ
LQLIEQIRSQVALINKQASTQTAVNHQVDHSMNAALEVTSSSNTPTIPGQLHLRSFITTP
GHQLPIKGPSNLNGQVSASLSSALEVACASVPQTGGQLASSGIKNNITINSLYPTTSNVV
PSQMPPCSASIGNSSCTSSNTGTGGEISCGISLSKNTSSPLTLTHGRLLTSPSNLPLVPH
SSSSSVIFPNPLASIAATTNALDPLSALMKHRKGKPPNVSVFDTKPSSEDPFFKHKCRFC
AKVFGSDSALQIHLRSHTGERPFKCNICGNRFSTKGNLKVHFQRHKEKYPHIQMNPYPVP
EYLDNVPTSSGIPYGMSLPPEKPVTTWLDSKPVLSTIPTSIALQLPPTVPSIIGSYGDST
SFTPLSRSPPSSECTSMSPNHLIAETSITQISSSPQHSVASDTPPVLKLEAFHLLPTSTT
KPGETSILTTSIPQVNSTTTVTTTTSTRTKITDSANTPSAVSHSSLRMVSGQFKPKFPFG
GLLDSMQTSETSKLQQLVENIDKKMTDPNQCVICHRVLSCQSALKMHYRIHTGERPFKCK
ICGRAFTTKGNLKTHFGVHRSKPPLRVQHSCPICQKKFTNAVVLQQHIRMHMGGQIPNTP
QPESFQDMDTDLSFDEKSLDTMSNYDDELIDEMDHLIEDETGLKEGNVDPHKKHLYTETS
PSTSPPASFISNIVSLENEMKLFDSVKTTNSITLKPPENAVEIDGENEDMFKNDSSSTVG
DLENHSVESPAQSESSGSMQALSPTYSQSESHRSKSPTQSNNSKDDALHLPSVNATVKSE
QSPSPSPASENTGALDLTAAQHTRSFVKDENHFSLLFLGQDRGLNTPSIMSSEPSTVKFE
NGHSKPPAMCEGPHLPAGPQVPTTTPQTTISPNLTPMLAPPPPRRTPKQHNCTSCGKNFS
SASALQIHERTHTGEKPFGCSICGRAFTTKGNLKVHMGTHMWNNAPARRGRRLSVDNPLA
LLGGDAIKFSEMFQKDLAARAVNVDPGFWNQYAVAITNGLAMKNNEISVIQNGGIPSVPI
SLSGGGIPAVGGMSGGMERSRTGSSPPLTGLEKTNLEMGTGHPFSRFREEDNEIEIN
NT seq
3954 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgtcggaagcaagcaaaaccgcagcagctgagatcggacgaggacccttcactt
ctggagctgctacctgaacacgtctcaggtgaaggattggatgattcagacagtggaaat
gagagccgcagtgggagtgaagagacccatgtgtgtgaaaagtgttgtgctgagttcttt
aagtggtctgatttctgtgaacatctgaagacctgtaccaagaatccacttgtgttaatt
atcagtgataatgaagtgacttcggaccaagcacaggactacctacctgagccatcaccc
atgcccagctgcagcagtgagccggcagacagcgatgatgcagtagaggaaagccacatg
cacgccgatagtgttgaaggagcagagatgatgctggacccggatgctgtcctggagaaa
gaacacgagcccatggaagtggaactgtctcctgagaaacccataaattctgatgaacag
gttacactggcagagccagacataagcctacctcaacatgaagatcataagcagtcttct
ggggcaggatacactatacccagcactaatgtcacactggaaacactgcatggaacccgt
gtggctgtggctcagttctctcaggatgcccgggaagcactagctggtgaagtgtcaact
atggccatccctatgatccttgaccagctcatggccttgcagcaacaacagcttcaccaa
cttcaactgatagagcagattcggagccaggtggcgctaataaacaaacaggcctccaca
cagacagctgtcaaccatcaagtagaccacagcatgaatgctgccttagaagtaacctca
tcttccaacacacccacaatacctgggcagcttcatctacgtagcttcattacaacccct
gggcatcagcttcccatcaaagggccctctaatttaaatggacaggtatcagcctcatta
tcttcagctctggaggtagcctgtgccagtgttcctcagacaggtggccaactggccagt
tctgggataaaaaataatatcacaattaattccttatatccaacaaccagtaatgtggtt
ccttctcagatgccaccatgctcagcatcaattggcaacagtagctgcaccagtagtaac
acaggaactgggggggaaataagttgtggtatttcactttcaaaaaacacatctagtcct
ctaacactgactcatggaagattgctaacatccccctccaaccttcctcttgtacctcac
agctcatccagcagtgttatcttccctaatcctctagccagtattgcagccacaacaaat
gctcttgatcctctttctgccttaatgaagcaccgcaaaggaaagcccccaaatgtctct
gtgtttgacaccaaacccagttcagaagatcccttcttcaaacacaagtgcagattttgt
gccaaggtgtttgggagtgacagtgccctgcaaattcatcttcgttcccatactggtgaa
aggcctttcaaatgcaacatttgtggtaatcgcttctccacaaaaggtaacttgaaggtt
cattttcagagacacaaagaaaagtatcctcacatccaaatgaacccctatccagtgcct
gagtatctggacaatgttccaactagctcaggtataccatatgggatgtcattaccccca
gaaaaacctgttaccacatggctggacagcaaacctgttttgtctacaatcccaacatca
atagcactgcaactccctccaacagtgcccagtattataggaagctatggggattcaact
agttttacccctttaagtagatcaccaccatcaagtgagtgtacatctatgtcccctaat
cacctcattgctgagaccagtattacacaaatttccagttcaccacagcatagtgtggcg
agtgacacacctccagttcttaaacttgaagcctttcatctactacccacctccaccact
aagcctggagaaaccagcatattgactacttccatacctcaagtgaattctacaaccaca
gttacaactacaactagcaccagaacaaagatcacagactcagcaaatactccctctgct
gtctcccattcatccctacgaatggtttccggtcagtttaagcccaagtttccttttggt
ggcctcctggactctatgcaaacatcagagacctcaaaactacagcagttggtggaaaat
attgataaaaagatgacagatcccaatcaatgtgtcatctgtcatcgtgtgcttagttgt
cagagtgctttgaagatgcattatcgcatccatacaggagaaagaccctttaaatgtaaa
atatgtggccgtgctttcacaactaagggtaatttgaaaactcactttggggttcacaga
tcaaagccccctctccgggtacagcactcttgtcccatatgccagaaaaagtttactaat
gcagtagttctgcagcaacacatccgtatgcatatgggtggacagattcccaacacaccc
cagcctgagagttttcaggacatggacacagatctgtcatttgatgaaaagagcttagat
accatgagcaactatgacgatgagctaattgatgagatggaccatttaatagaagatgaa
acaggtcttaaagaagggaatgtggacccacacaaaaaacatttatacacagagacatct
ccaagcacttcacccccagcctcttttatatctaacattgtttctttagagaatgaaatg
aagctatttgactcagttaaaacaaccaattccatcaccctgaagcctccagaaaatgcg
gttgaaattgatggggaaaatgaagacatgtttaagaatgactcatcttccactgtagga
gacttggagaaccacagtgttgagagtccggcacagtctgaatcatctggctcaatgcag
gctctgtctccaacttacagtcagtctgagagtcatcgctccaagtcccctactcagtca
aataacagcaaggatgatgctttgcatctaccttcagtgaatgcaacagtaaagtctgaa
cagtctccttctccttctcctgcatcagaaaacacaggcgcattagatctcactgctgca
cagcacactaggtcatttgtcaaagacgagaatcacttcagtctgctgttcctgggacaa
gacagaggtttaaacactcccagtattatgagctcagaaccaagcacagtcaaatttgag
aacggacacagtaaaccaccagccatgtgtgagggaccccacttaccagctggcccccag
gtacctaccacaacccctcagacaacaataagccccaaccttacaccaatgctggcacct
cctccacctcggcggacccccaaacaacataactgcacctcttgtgggaagaatttttca
tcagccagtgctcttcagattcatgagcgcactcacacaggagaaaaaccatttggctgt
tctatctgtggcagagccttcaccacaaagggaaatctgaaggtccacatgggaacccac
atgtggaacaatgccccagccaggcggggaagacgactgtcagtggacaatccattggct
cttctaggtggagatgccataaaattcagtgaaatgtttcagaaggatcttgcagcacga
gcagtaaacgtagacccaggcttttggaatcagtatgccgtagccattaccaatggacta
gcaatgaaaaacaatgagatctctgtcattcagaatggaggcattccatccgttcccatt
agtctaagtggtggtggcattcctgctgtaggaggaatgtcaggagggatggagaggtct
cgtactggaagcagccctccactcactggacttgagaagactaacctggaaatgggaact
ggacatcccttctccagattcagggaagaggacaatgaaatcgagattaattga
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integrated database retrieval system
