Labeo rohita (rohu): 127179113
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Entry
127179113 CDS
T09007
Symbol
prpf3
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp3
KO
K12843
U4/U6 small nuclear ribonucleoprotein PRP3
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127179113 (prpf3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127179113 (prpf3)
Spliceosome [BR:
lroh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127179113 (prpf3)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP3
Prp3_C
PWI
ATP-synt_10
TPX2
Motif
Other DBs
NCBI-GeneID:
127179113
NCBI-ProteinID:
XP_050988365
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Position
16:complement(30229647..30246057)
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AA seq
701 aa
AA seq
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MSLPKREVDELRPWVERTVKKVLGFSEPTVVTAALHCVGKGLDKRKTTDQLRPFLDDSAS
SFVERLFEALEESRNTRGNKGAGEKNRKRELKEVFGDEVEGVKDGDGVESVVKKKRVPRF
EEVEEPAVLPGPPTESPGMLTKMQIKQMMEAATRQIEERKKQLSLVSPVPIVQPRLIPSQ
TDSSVPHPTLPAVGATQSIAPSQAANFMNDAIEKARKAAELQAKIQSTLAMKPGILGALG
NTGPHNLVALANLHAMGIAPPKVEPREVTKPTPLILDELGRTVDASGKEVELTHRMPTLK
ANIRAVKREQFRQQLKEKPSDDLESTSYFDPRVAINAAQRAKRGFRFHEQGRFEKIAQRI
RTKAQLEKLQMEIAQAAKKTGIQASTKLALIAPKKELGEGEIPYIEWWDSYILPSHIELS
AHTNFDEVEMHGVTTLVEHPIQMAPPVDTDKPVTLGVYLTKKEQKKLRRQTRREGQKELQ
EKVRLGLMPPPEPKVRISNLMRVLGTEAVQDPTKVEAHVRAQMAKRQKAHEEANAARKLT
AEQRKEKKVKKLKEDLSHGVYIAVYRIRNLHNPAKKFKVEANANQLYLTGTVVLHKDVNI
VVVEGGPKAQKKFKRLMLNRIKWDEPNSKREEPQDSDDEGFRKNNKCTLVWEGTAKERSY
GEVKFKQCPTESMAREHFKKHGTEHYWDLALSQSVLETTDD
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgtctctgcccaagcgagaggttgatgagctgaggccatgggtggaacgcacagtaaag
aaggtccttggcttttctgaacccactgtggtcacagcagctttacactgtgtaggaaaa
ggcctggacaaaagaaaaaccacagaccagctaaggccgtttcttgatgattcagcaagc
agctttgttgagcgtctgtttgaagctcttgaggaaagcagaaacacccgtggcaataaa
ggagctggagagaagaaccgcaaaagagagctaaaggaagtgtttggagatgaggtggaa
ggagtgaaggatggagacggtgtggaatctgtggtaaagaagaagagggtgcctcgcttt
gaggaggtggaggaaccagctgttttacctggaccccctacagagagtcctggcatgctc
accaagatgcagatcaagcaaatgatggaagcagccacacggcagattgaggagagaaag
aaacagctaagtcttgtgtctcctgtccctatcgtgcagcctagattaattccctctcag
acagactctagtgttccacatcccacccttccagcagtgggtgcgacccagtccatcgct
ccctcccaggctgctaatttcatgaatgacgctatagagaaagcccgcaaggcagctgag
ctgcaggccaagatccaatccacactggctatgaaacccgggattctgggtgctttggga
aacacagggccacataacctggtagccttggctaacctgcacgccatgggcatcgcacca
cctaaagtggaaccacgtgaggtcacaaagccaacacctctcattttggatgagcttggg
cgaacggttgatgccagtggaaaagaagttgagctcacacatcgtatgcccactctaaaa
gccaacatcagagcggtgaagagggaacagtttcggcagcagttaaaggaaaaacccagt
gatgacctggaatccacgtcttactttgacccacgtgtggccatcaatgctgcacagaga
gccaagagagggtttaggttccatgaacagggacgctttgagaagatcgcccagcgcata
cgcacaaaagctcagttggagaaactacagatggagattgctcaggctgccaagaagaca
ggcatacaggcatccactaaactggctcttattgcccccaaaaaggagttgggagagggg
gagattccttatatagagtggtgggactcctacattctgccttcccacatagaactatct
gcacatacaaattttgatgaggtggagatgcatggagtcaccaccctagttgaacaccca
attcagatggcccctccagtggatacagataagccagtgactttgggtgtgtatttgact
aagaaggaacaaaagaagttgaggagacaaactcgcagagaaggccagaaagagttgcag
gaaaaggtccgattgggtcttatgcctccacctgaacctaaagtgcggatctctaatctg
atgagggttttggggacggaagctgtgcaggaccccactaaagtggaggctcacgttaga
gcacaaatggcaaagagacagaaagcccacgaggaggcaaatgcagcacgcaaacttacg
gcagaacaaaggaaagagaagaaagtgaagaaacttaaggaagatttgagtcatggagtt
tacattgctgtttacagaatccgaaatctgcataacccagccaaaaagtttaaggtggag
gccaatgcaaaccaactgtacctcactggcactgtggtacttcacaaagatgtcaacatc
gttgtagtggagggaggccccaaagcacagaagaaatttaaacgacttatgttgaataga
atcaaatgggatgagccgaattcaaagagagaggagcctcaagattcagatgatgagggt
ttcaggaagaataataaatgcacattggtttgggagggtacagccaaggaacgtagctat
ggggaagttaagtttaaacagtgtccaacagaaagtatggctagggaacattttaagaag
catggcactgagcactactgggacttggctctgagtcagagtgttctggagacaactgat
gactga
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