Labeo rohita (rohu): 127179148
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Entry
127179148 CDS
T09007
Symbol
rbm8a
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03013
Nucleocytoplasmic transport
lroh03015
mRNA surveillance pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127179148 (rbm8a)
09122 Translation
03013 Nucleocytoplasmic transport
127179148 (rbm8a)
03015 mRNA surveillance pathway
127179148 (rbm8a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127179148 (rbm8a)
03041 Spliceosome [BR:
lroh03041
]
127179148 (rbm8a)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
127179148 (rbm8a)
Spliceosome [BR:
lroh03041
]
Complex C
Other components
EJC/TREX
127179148 (rbm8a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
127179148
NCBI-ProteinID:
XP_050988416
LinkDB
All DBs
Position
16:complement(5804655..5808501)
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AA seq
174 aa
AA seq
DB search
MADVLDLHEAGGEDFPMDEDGDESIHKLKEKAKKRKGRGFGSEEGARSRVREDYDTVEQD
GDEPGPQRSVEGWILFVTGVHEEATEEDVHDKFAEFGEIKNLHLNLDRRTGYLKGYALVE
YETYKEAQAAMEGLNGQELMGQPISVDWCFVRGPPKSKRRGGRRRSRSPDRRRR
NT seq
525 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtactggatcttcatgaagcgggaggtgaagactttcctatggacgaggat
ggcgacgagagcattcacaagttaaaagagaaagccaagaagaggaagggtcgtgggttt
ggatcagaggagggagcgaggtctagagtcagagaggactatgacacagtagaacaggat
ggagatgagcctggaccacagagatctgttgaaggatggattctttttgtgactggtgta
catgaggaagcgacggaagaggatgtccacgacaaatttgcagagtttggagaaatcaag
aacttgcatttaaatttggacagaagaactggttatcttaagggttatgcactggtggag
tacgagacctacaaagaagcccaggcagcaatggaagggctgaatggccaggaacttatg
gggcaaccaatcagcgtcgactggtgctttgtaagaggaccccctaagagcaagaggagg
ggtggaaggcgacgcagcaggagccctgacaggcggcgacgttga
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