Labeo rohita (rohu): 127179176
Help
Entry
127179176 CDS
T09007
Symbol
prpf31
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127179176 (prpf31)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127179176 (prpf31)
Spliceosome [BR:
lroh03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
127179176 (prpf31)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
127179176
NCBI-ProteinID:
XP_050988450
LinkDB
All DBs
Position
16:complement(14435809..14443878)
Genome browser
AA seq
509 aa
AA seq
DB search
MSLADELLADLEEAGEEEDGLYPGGEGGESDGEPGENQADGGLEDIPEEMEVDYSGTESV
TSIAKLRHSKPFAEIMDKIGHYVGNQRKNSEVSGPVEADPEYRLIVAANNLTVEIDNELN
IIHKFVRDKYSKRFPELESLVPNALDYIRTVKELGNSLEKCKNNETLQQILTNATIMVVS
VTASTTQGTMLGDDELQRLEEACDMALELNQSKHRIYEYVESRMSFIAPNLSIIVGASTA
AKIMGVAGGLTNLSKMPACNLMLLGAQRRTLSGFSSTSLLPHTGYIYHCDVVQSLPPDLR
RKAARLVAAKCTLASRVDSFHESADGKVGYDLKEEIERKFDKWQEPPPVKQVKPLPAPLD
GQRKKRGGRRYRKMKERLGLTEIRKHANRMTFAEIEDDAYQEDLGFSLGQLGKSGSGRVR
QAQVNDSTKARISKSLQRTLQKQSMTYGGKSTVRDRSSGTSSSVAFTPLQGLEIVNPQAA
EKKVAEANQKYFSNMAEFLKVKREKDDKV
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgcagacgaattgcttgccgacttggaggaggcaggagaggaagaggacggg
ctttatcccggtggagaagggggtgagagtgatggggaacccggggagaatcaagcagat
gggggtctggaggacataccggaggagatggaggtggattacagtgggacggagagcgtc
acatccatagcaaaactaagacacagcaagccatttgctgaaatcatggataaaattggt
cattatgttggaaatcaacgtaaaaattcagaagtgtctggacctgttgaagcggacccg
gagtacagactcattgttgccgccaacaatctcacagtggaaattgacaatgaacttaat
atcattcacaagtttgttcgtgacaagtactccaaaaggtttcctgaactcgagtctctg
gtgccaaatgcactagactacataagaactgttaaggagctgggcaacagtctagagaaa
tgcaaaaataatgagaccctccagcagatcctgactaatgctactatcatggtggtcagc
gtcaccgcttcaaccacacaaggaacaatgcttggtgatgatgagctccagcgactggaa
gaggcgtgtgacatggcccttgagctcaaccaatcaaaacacaggatttatgaatatgtg
gaatccaggatgtcatttattgctccaaatctttcaattattgttggagcttcaactgct
gccaagattatgggtgttgctggtgggctgactaacctgtccaagatgcctgcgtgtaat
ctgatgctgctgggagctcagcggaggacgctgtctggattcagcagcacatccctgctg
ccccacactggctacatctaccactgtgacgtagtgcagtctctgcctccagatctgagg
agaaaagcagctcgtttggttgcagctaaatgcacactggcttcccgtgtggacagtttt
cacgagagcgcggatggcaaggttggctatgacttaaaggaagagattgagcgaaagttt
gataaatggcaggagcctccaccagtcaagcaggtgaagcctcttccagctcccctagat
ggacagaggaagaagagaggaggaagaaggtatcgtaagatgaaagaaaggctgggtctg
acagaaatcaggaaacatgccaacagaatgacatttgcagagatcgaggacgatgcttat
caagaggatctgggcttcagtctcggtcagctgggcaagtctggcagcggcagggtcagg
caagctcaggtcaacgactccaccaaagccagaatatccaaatccttacagcggacactg
cagaagcagagcatgacgtacggtggcaaatccactgtcagagacagatcatctggaacc
agctccagcgtagccttcacgcctttacaggggctggagattgtgaacccacaggctgca
gagaagaaggtggctgaagccaatcagaaatatttctccaacatggccgagttcctcaag
gtcaagcgcgagaaggatgataaagtgtga
DBGET
integrated database retrieval system
