KEGG   Labeo rohita (rohu): 127179345
Entry
127179345         CDS       T09007                                 
Symbol
exo1
Name
(RefSeq) exonuclease 1 isoform X1
  KO
K10746  exonuclease 1 [EC:3.1.-.-]
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    127179345 (exo1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lroh03032]
    127179345 (exo1)
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127179345 (exo1)
DNA replication proteins [BR:lroh03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    127179345 (exo1)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Other MMR factors
     127179345 (exo1)
SSDB
Motif
Pfam: XPG_N XPG_I XPG_I_2 TPR_2
Other DBs
NCBI-GeneID: 127179345
NCBI-ProteinID: XP_050988659
LinkDB
Position
17:complement(14194747..14202536)
AA seq 805 aa
MGIQGLLQFIKEASEPISVKKYRGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVSYCM
KFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQANLQKGKQLLREGKISEARECFT
RSVNITPSMAHDVIKTARMRGVDCVVAPYEADAQLAFLNKSGIAQAVITEDSDLLAFGCK
KVILKMDKQGNGLEIDQCHLGRCKSLGNIFTEEKFRYMCILSGCDYLPSLYGIGLGKACK
LLRMANNPDILKVIKKMGQYLKMDIAVPDEYIEGFTKANNTFLYQLVFDPLKRKVVPLNP
YPDHINPASLSYAGTNVGDEKGLEMALGNLDINTMQRIDDFNPDAPYTQPSKAPRSSSWN
DRRDKSGPFQISIWSRNYEPGSTQPKSPTTPKRPPPTRGKERIVNMQRIKLPQRESQVKR
PREDTSLSVDDLLGQYSAGVKRHCPETPPTTEPPTNNNIASKEKGCGSTVGQSRPRNRFA
TLLQWRNQSEEGTGEQITRSRFFCNGESSMPETQEDSLKQDSPQPVKSPEMSVSQSEGNT
LELCQDSETEQAEDEKSSPSASPSHSSRSASLGLGVFSWSGNTRELSKSSHPPTVTTDRH
SSTPSGLSTLQQFHRKKGSFSWAGSGLSLSSSPVESTEDAEKSPESPPSQDSAYFSQSSS
TSAGTENSLITEDNSDKEKERDSDGSNSLSSSPTDKLKPALNRTKVSGLSRKQPCGQGKG
GKIETSAPARPSGLRKKASGKKSTVNNENSPGLQATISGLWGAFSFKKDISKLSTCRKGE
PMSPVRENVMTELNEADQEILIIAE
NT seq 2418 nt   +upstreamnt  +downstreamnt
atgggaattcaaggtttgttgcaatttattaaagaagcatcggagcccatcagtgttaag
aagtataggggacagacagtggcggtggacacatactgctggctccataagggggcattt
tcatgtgcagagaaacttgcaaaaggagaacctacagatcagtatgtgtcctactgtatg
aagtttgtggatatgctgctttcttttggagttaagccgatcttggtgtttgatggacgt
aacttgccctccaaacaggaagtggagaaatcccggcgcgagcgtcgacaggcaaatctg
cagaaaggcaaacagctgctgcgggagggtaagatatcagaagcccgagaatgttttacc
cgcagtgttaatatcaccccgtccatggcacatgatgttattaagaccgccaggatgcgt
ggagtggactgtgttgttgctccgtatgaagcagatgcccagttagcttttctgaacaaa
tctggtattgctcaggcagtgatcacagaggactcagatctgctggcatttggctgcaaa
aaggtgattttaaagatggataaacaaggtaatggattggagattgatcagtgtcacctg
ggccgctgcaagtctctgggcaacatcttcacagaagagaagttccgctacatgtgcatc
ctctctggctgcgactatctgccatctctgtatggcatcggtctgggaaaggcatgcaag
ctgctcaggatggcaaataacccagatattctgaaggtgataaagaagatgggtcagtac
ctgaagatggacatcgctgtgccagatgagtacattgagggtttcacaaaagccaacaac
acatttctgtatcagctggtctttgaccccttgaagaggaaggtggttcctttgaaccct
tacccggatcacattaaccccgcttccctcagctatgctggaactaatgtaggagatgag
aaagggctagaaatggctcttgggaatctggacattaacacaatgcaaagaatagatgac
ttcaaccctgacgcaccttacactcagccctctaaagcccctcgcagtagttcttggaat
gacagacgtgacaaaagtggcccgttccagataagtatttggagcaggaactatgaaccc
ggtagcacccagccaaaaagtcctaccacccccaaaagaccccctcctacccggggcaaa
gagaggatcgttaacatgcagaggataaaattgccccaaagagagtcacaggtgaaaaga
ccccgtgaagacaccagcctctctgtggatgacctgttagggcagtattcagctggtgta
aagagacactgccctgaaactccgcccactactgagccgccaaccaacaacaacattgct
tccaaggagaaggggtgtggcagcacagttggacagtcccgtcctcgaaatcgctttgca
acactgctgcaatggaggaaccaatcagaagagggcaccggagagcagatcacacgcagc
cggttcttctgtaatggtgaatccagtatgccagagacacaggaagactcgctaaaacaa
gattcacctcagcctgtgaagtctccagagatgagtgtctcacaatctgaaggaaacaca
ctagaattgtgtcaggactcagagacagagcaggccgaagatgagaagtccagcccatct
gcatctccgtctcactcctccaggtctgcgagtttgggtctcggggtttttagttggtca
ggaaacaccagagaactgagtaaatcttcacatccacccaccgtcaccacagacagacat
tcctccacaccctcagggttatccaccctacagcagtttcacagaaagaagggcagcttc
tcctgggcagggtcagggctttcgctctcatcttctcctgtagagagcacagaggatgca
gagaaatctcccgagtctcctccgtctcaggacagtgcatatttctctcaatccagcagc
acctctgctggtactgagaactccctaatcacagaggacaactctgataaggaaaaggag
agagattcagatggctccaacagcctaagcagttctcccacagacaagctgaaacctgct
ctgaacagaacaaaggtttcagggttgtctcggaaacagccttgtgggcagggtaaaggc
ggtaaaatcgagacctccgctcctgctaggcctagcggtctaaggaagaaagcgagtggg
aaaaagagtaccgtcaacaatgagaacagcccaggcctgcaggccaccatcagcggcctc
tggggggccttcagcttcaagaaggacatttcgaagctgagcacctgcagaaaaggagag
ccgatgtctccagtcagagagaatgtgatgacagaactgaatgaagcagatcaagagatt
ctcatcattgcggagtga

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