Labeo rohita (rohu): 127179345
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Entry
127179345 CDS
T09007
Symbol
exo1
Name
(RefSeq) exonuclease 1 isoform X1
KO
K10746
exonuclease 1 [EC:3.1.-.-]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
127179345 (exo1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lroh03032
]
127179345 (exo1)
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127179345 (exo1)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Elongation Factors
Other elongation factors
127179345 (exo1)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
127179345 (exo1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
XPG_N
XPG_I
XPG_I_2
TPR_2
Motif
Other DBs
NCBI-GeneID:
127179345
NCBI-ProteinID:
XP_050988659
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Position
17:complement(14194747..14202536)
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AA seq
805 aa
AA seq
DB search
MGIQGLLQFIKEASEPISVKKYRGQTVAVDTYCWLHKGAFSCAEKLAKGEPTDQYVSYCM
KFVDMLLSFGVKPILVFDGRNLPSKQEVEKSRRERRQANLQKGKQLLREGKISEARECFT
RSVNITPSMAHDVIKTARMRGVDCVVAPYEADAQLAFLNKSGIAQAVITEDSDLLAFGCK
KVILKMDKQGNGLEIDQCHLGRCKSLGNIFTEEKFRYMCILSGCDYLPSLYGIGLGKACK
LLRMANNPDILKVIKKMGQYLKMDIAVPDEYIEGFTKANNTFLYQLVFDPLKRKVVPLNP
YPDHINPASLSYAGTNVGDEKGLEMALGNLDINTMQRIDDFNPDAPYTQPSKAPRSSSWN
DRRDKSGPFQISIWSRNYEPGSTQPKSPTTPKRPPPTRGKERIVNMQRIKLPQRESQVKR
PREDTSLSVDDLLGQYSAGVKRHCPETPPTTEPPTNNNIASKEKGCGSTVGQSRPRNRFA
TLLQWRNQSEEGTGEQITRSRFFCNGESSMPETQEDSLKQDSPQPVKSPEMSVSQSEGNT
LELCQDSETEQAEDEKSSPSASPSHSSRSASLGLGVFSWSGNTRELSKSSHPPTVTTDRH
SSTPSGLSTLQQFHRKKGSFSWAGSGLSLSSSPVESTEDAEKSPESPPSQDSAYFSQSSS
TSAGTENSLITEDNSDKEKERDSDGSNSLSSSPTDKLKPALNRTKVSGLSRKQPCGQGKG
GKIETSAPARPSGLRKKASGKKSTVNNENSPGLQATISGLWGAFSFKKDISKLSTCRKGE
PMSPVRENVMTELNEADQEILIIAE
NT seq
2418 nt
NT seq
+upstream
nt +downstream
nt
atgggaattcaaggtttgttgcaatttattaaagaagcatcggagcccatcagtgttaag
aagtataggggacagacagtggcggtggacacatactgctggctccataagggggcattt
tcatgtgcagagaaacttgcaaaaggagaacctacagatcagtatgtgtcctactgtatg
aagtttgtggatatgctgctttcttttggagttaagccgatcttggtgtttgatggacgt
aacttgccctccaaacaggaagtggagaaatcccggcgcgagcgtcgacaggcaaatctg
cagaaaggcaaacagctgctgcgggagggtaagatatcagaagcccgagaatgttttacc
cgcagtgttaatatcaccccgtccatggcacatgatgttattaagaccgccaggatgcgt
ggagtggactgtgttgttgctccgtatgaagcagatgcccagttagcttttctgaacaaa
tctggtattgctcaggcagtgatcacagaggactcagatctgctggcatttggctgcaaa
aaggtgattttaaagatggataaacaaggtaatggattggagattgatcagtgtcacctg
ggccgctgcaagtctctgggcaacatcttcacagaagagaagttccgctacatgtgcatc
ctctctggctgcgactatctgccatctctgtatggcatcggtctgggaaaggcatgcaag
ctgctcaggatggcaaataacccagatattctgaaggtgataaagaagatgggtcagtac
ctgaagatggacatcgctgtgccagatgagtacattgagggtttcacaaaagccaacaac
acatttctgtatcagctggtctttgaccccttgaagaggaaggtggttcctttgaaccct
tacccggatcacattaaccccgcttccctcagctatgctggaactaatgtaggagatgag
aaagggctagaaatggctcttgggaatctggacattaacacaatgcaaagaatagatgac
ttcaaccctgacgcaccttacactcagccctctaaagcccctcgcagtagttcttggaat
gacagacgtgacaaaagtggcccgttccagataagtatttggagcaggaactatgaaccc
ggtagcacccagccaaaaagtcctaccacccccaaaagaccccctcctacccggggcaaa
gagaggatcgttaacatgcagaggataaaattgccccaaagagagtcacaggtgaaaaga
ccccgtgaagacaccagcctctctgtggatgacctgttagggcagtattcagctggtgta
aagagacactgccctgaaactccgcccactactgagccgccaaccaacaacaacattgct
tccaaggagaaggggtgtggcagcacagttggacagtcccgtcctcgaaatcgctttgca
acactgctgcaatggaggaaccaatcagaagagggcaccggagagcagatcacacgcagc
cggttcttctgtaatggtgaatccagtatgccagagacacaggaagactcgctaaaacaa
gattcacctcagcctgtgaagtctccagagatgagtgtctcacaatctgaaggaaacaca
ctagaattgtgtcaggactcagagacagagcaggccgaagatgagaagtccagcccatct
gcatctccgtctcactcctccaggtctgcgagtttgggtctcggggtttttagttggtca
ggaaacaccagagaactgagtaaatcttcacatccacccaccgtcaccacagacagacat
tcctccacaccctcagggttatccaccctacagcagtttcacagaaagaagggcagcttc
tcctgggcagggtcagggctttcgctctcatcttctcctgtagagagcacagaggatgca
gagaaatctcccgagtctcctccgtctcaggacagtgcatatttctctcaatccagcagc
acctctgctggtactgagaactccctaatcacagaggacaactctgataaggaaaaggag
agagattcagatggctccaacagcctaagcagttctcccacagacaagctgaaacctgct
ctgaacagaacaaaggtttcagggttgtctcggaaacagccttgtgggcagggtaaaggc
ggtaaaatcgagacctccgctcctgctaggcctagcggtctaaggaagaaagcgagtggg
aaaaagagtaccgtcaacaatgagaacagcccaggcctgcaggccaccatcagcggcctc
tggggggccttcagcttcaagaaggacatttcgaagctgagcacctgcagaaaaggagag
ccgatgtctccagtcagagagaatgtgatgacagaactgaatgaagcagatcaagagatt
ctcatcattgcggagtga
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