Labeo rohita (rohu): 127179381
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Entry
127179381 CDS
T09007
Symbol
pax1a
Name
(RefSeq) paired box protein Pax-1a
KO
K09382
paired box protein 1/9
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127179381 (pax1a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
127179381 (pax1a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PAX
HTH_23
HTH_32
HTH_28
HTH_29
Motif
Other DBs
NCBI-GeneID:
127179381
NCBI-ProteinID:
XP_050988712
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Position
17:32739225..32743531
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AA seq
356 aa
AA seq
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MEQTYGEVNQLGGVFVNGRPLPNAIRLRIVELAQLGIRPCDISRQLRVSHGCVSKILARY
NETGSILPGAIGGSKPRVTTPNVVKNIREYKQGDPGIFAWEIRDRLLADGVCDKYNVPSV
SSISRILRNKIGNLSQPNQYENGKQAPPQSSLSYNHIYPYSYPNAMSPSGTKMSNPPGVP
VTGGHVSISRGWPSAHTVSNILGIRAFMDPSAIASAEGYAPKMEDWGSVNRATFPSAHGV
NGIDKSAIDADIKYPQPSSTLSSYVPACAYSPSNQYGVYSGPAGSYVSPGHHWQAQGTSL
PHPSGGVAMHPSDIHSSMAFKHALRDGDRKPPSPLSKQQHEALSNIHGLSLSTSSS
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atggagcaaacctacggggaggtgaaccagctggggggagtttttgtcaatggacgtcct
ttgcccaatgcaataagattacgaatagtggagttagcccagcttggcatcagaccctgt
gacataagcagacagcttcgggtctcccacggctgtgtgagtaaaatccttgcgagatac
aacgaaactgggtccattttgccaggcgcaatcggtggcagcaaaccacgagttacgacg
ccaaatgtagtaaaaaacatacgggagtacaaacaaggagacccgggaatttttgcatgg
gagatccgggaccgtcttctcgcggacggagtatgtgacaagtacaacgttccctcggtc
agctccatcagccggatattaaggaacaagattggaaacctctcccagccgaaccaatat
gaaaacggcaagcaagcacctccgcagtccagcctctcctacaaccatatatacccgtat
tcataccccaatgcaatgtctccttccgggaccaaaatgagtaatcctcccggtgtccct
gtcacgggtgggcatgtaagcatttctcgaggttggccttcagcgcacacggtcagcaat
atactgggtattcgggctttcatggatccttcagctattgctagcgctgaaggatacgca
ccaaaaatggaggactggggtagtgtgaatagagcgacatttccctctgctcatggagtc
aatggaatagacaaatcagctattgatgcagacataaaataccctcagccttcgtcgact
ttgtctagttatgtcccagcatgcgcatactctccctccaaccagtatggcgtgtacagt
ggtccagcaggcagttatgtgagcccagggcatcactggcaggcccagggcaccagcctc
ccccaccctagcggtggcgtagcgatgcacccgagtgacatccattcttctatggcgttc
aaacatgcactgcgagatggagacagaaaaccaccgagtcccctaagcaagcagcagcac
gaagccttgagcaatatacacggactcagcctttctacctcatcctcgtaa
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