Labeo rohita (rohu): 127179401
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Entry
127179401 CDS
T09007
Name
(RefSeq) neuronal PAS domain-containing protein 3 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127179401
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
127179401
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS
PAS_11
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
127179401
NCBI-ProteinID:
XP_050988745
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All DBs
Position
17:5855919..6245932
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AA seq
977 aa
AA seq
DB search
MIRIFPDFSVQVTAAAAAGAGAGGGMPAASRVPGATNGNPQNVQGLTSYQQSEPYWERSA
NASSCSATRPKTLHLGGQQHTSSPWLQALRKEKSRDAARSRRGKENFEFYELAKMLPLPG
AITSQLDKASIIRLTISYLKMRDFANQGDPPWNLRIEGPPPNTSVKAIGSQRRRSPSAVA
TEIFEPHLGSHILQSLDGFVFALNKEGRFLYISETVSIYLGLSQVELTGSSVFDYVHPGD
HVEMAEQLGMKLPPGRGLLSQGGGAEDGASSASSSSHSETPEPVESNSPTLLSPDNTLER
SFFIRMKSTLTKRGVHIKSSGYKVIHITGRLRIRMALTHSRSVPNQIMGMVVVAHALPPP
TINEVRIDCQMFVTRVNMDLNIVYCENRISDYMDLTPVDIVGKRCYHFIHAEDVEGIRQS
HLDLMNKGQCVTKYYRWIQKNGGYIWIQSSATIAINAKNANEKNIIWVNYVLSNPEYKDT
PMDIAQLPNLPEKASESSETSDSESDSKENSEDNENSKSDGKGNQSSENSEDPESDSKKQ
TGRPPEQEMRRQEEGDSSSNPESQDSDDSLEPSDCETDHKEGRLGGLHIKVERYGDGEVE
ELQDSPSSCSSEEEEDEVEDIVKDCNSGGELSGPAMSKHQKRKKRRKKQKWDGSRQRLRL
SPSAAATPSPGSLDPTLGDQPPLLLPPSPTSSSVLKIKTEMSEPINFDNDSSIWNYPPNR
EISRNESPYSMTKPHDTFPSPPPAGLQVSIPDSVLTPPGAEGGGGSRKPNFNGNSSSGNN
NSAPTSVSGATPGSLVPPSSSATADPLSPPLSASPRDKQQGTPTSSGSLLYTSDLEALQR
LQAGNVVLPLVHRVTGTLAATSTASPRVYTTGTIRYAPADVSLAMQGNLLPNAHTAVNFV
DGPGFGIDPKTPMEMLYHHVHRLNMSTPFGGAVSGAGLTQMPAANVFTTAEGLFSTLPFP
VYSNGIHNTQTLERKED
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atgatcaggatcttcccggatttcagtgttcaggtgacggcggcggcggctgcaggtgcg
ggagccggtggagggatgccggctgcgtccagagtcccgggagctactaacgggaacccg
caaaacgtccaaggcttgacgtcttaccaacaaagcgagccatactgggagaggtctgct
aatgcaagctcctgctccgccactaggcccaagacactccaccttggagggcaacaacat
acctcatcaccatggttgcaggctctaaggaaggagaagtcacgtgacgccgctcgctcg
cgccgggggaaggaaaacttcgagttttacgagctggcaaagatgcttccgctccccggc
gccatcaccagccagctggacaaggcctccatcatccgtctcaccatcagctaccttaag
atgagggactttgccaaccagggagacccgccgtggaacctgcgcatcgaaggaccgccg
cccaacacctcagtcaaagctatcgggtcccagcggaggcggagccccagcgctgttgcc
acggagatctttgagcctcaccttggcagccacatcctgcagtccctggatggatttgta
tttgcactaaacaaggaggggaggtttttgtacatctcagagacggtgtccatatacctg
gggctttcacaggtagagctgacgggcagcagcgtgttcgattacgttcatccgggcgat
catgtggagatggccgagcagctgggtatgaagcttccgccgggcagagggctgctgtct
cagggcggcggggccgaggacggggccagctctgcctcctcttcctctcactctgagaca
cctgagccagtggagtcgaacagccctacacttctgtcgccggataacactctagaacgt
tccttcttcatccgtatgaagtccacgctcaccaagagaggcgtccacatcaagtcctct
ggatacaaggttatccacattaccggcaggctgcggataagaatggcattaacgcacagt
cgttcggtacccaatcaaatcatgggcatggttgtggtggcacacgcacttcctccgcca
accatcaatgaggttcggatcgactgccagatgtttgtcacacgggtcaacatggatctc
aacatcgtctactgtgaaaacagaatcagcgactacatggacctgacacctgtcgacatc
gtagggaagagatgttatcacttcattcacgcagaggacgtggaaggcattcggcaaagc
catttagacctaatgaataaaggtcagtgtgtgacaaagtattaccgctggattcagaag
aatggaggttacatctggatccagtccagtgccactattgcaatcaacgccaagaacgcc
aatgaaaaaaacatcatctgggtcaactatgtactcagtaatccagagtacaaagacaca
ccaatggatatcgcacagctgcctaacctgccagagaaagcgtcagagtcctcagaaacg
tctgattctgaatccgactccaaggagaactctgaagacaatgaaaactccaagtcagat
ggaaaggggaatcagtcttccgagaacagcgaagatccagagtcggacagtaagaaacag
acaggccggccgccagagcaagagatgagaagacaagaagaaggagacagttctagcaat
ccagaaagtcaagacagtgatgatagcctggaaccttctgactgtgaaactgaccacaag
gagggtcgcctgggtggtttacacataaaggtggagcgttacggcgacggtgaggtggag
gaactacaggactcgccctcctcttgctcctcagaagaagaagaggacgaggtggaagat
atcgtgaaggactgcaacagtggaggagagctgagcggaccagcaatgagtaaacaccag
aagagaaagaagaggagaaaaaagcagaaatgggatggtagtcggcagcgcctccgtctg
tctccctcggccgctgctacccccagtcctggcagcctggaccccacccttggggaccag
cctcccctcctgcttccaccctccccaaccagttcctctgtgctgaagatcaagactgag
atgtcagaacctataaacttcgacaacgacagcagcatctggaactacccacccaaccga
gagatttcccgcaacgagtccccctacagcatgacaaaaccccacgacactttcccttct
cccccgcctgccggcctgcaggtgtccattcccgactctgtcctcactccgcccggtgcc
gagggtggaggaggcagcagaaagcccaacttcaatggcaacagtagcagcggcaacaat
aacagcgcccccacttctgtgtccggcgcaactccgggcagcttggttcctccttccagt
tcagccaccgctgacccgctctccccacctctctcggcctcgccacgggacaagcagcag
ggtacgcccacctcctccggttccctgctctacaccagtgatctggaagccctgcagagg
ttacaagcggggaacgtggtacttccattggtgcaccgagtcacaggcacgctcgctgcc
accagcacggcttccccgcgagtctacaccactggaacgatccgatacgccccagcagac
gtcagcctggccatgcagggcaacctcctgcctaatgcccacacggctgtgaactttgtg
gacggacccggcttcggcatagaccccaagacgcccatggagatgctgtatcatcacgtg
caccggctcaacatgtccacccccttcgggggtgcggtcagcggagccgggctcacgcag
atgcccgctgctaacgtcttcaccacggcagagggacttttctccacgcttccgtttccc
gtctacagcaacggcatccacaacacacagactctggagcgcaaggaggattga
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