Labeo rohita (rohu): 127179423
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Entry
127179423 CDS
T09007
Symbol
nrxn3a
Name
(RefSeq) LOW QUALITY PROTEIN: neurexin 3a
KO
K07377
neurexin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127179423 (nrxn3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127179423 (nrxn3a)
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
127179423 (nrxn3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
127179423
NCBI-ProteinID:
XP_050988820
LinkDB
All DBs
Position
17:complement(10216001..10566535)
Genome browser
AA seq
1492 aa
AA seq
DB search
MNFFRFPVQLQLLISTVLGPCLGLEFTGSQGQWARYLRWDASTRSDLSFQFKTDVSTALI
LYFDDGGFCDFLQLMVVEGKLQLQFSIDCAETTVVSDKRVNDSSWHSATLSRYNLRTVLG
LDGASKSGEVRPQRQYMKIVSDLFLGGVPQDIRISVLTLPTVKDLPPFKGIIRELKYSNK
EPILLSSQRVRMDIEGICMENPCENGGTCSVVDGEPLCDCSKTEYVGRFCNEEANSIPGF
AHMMMADQAKGKAREENVATFRGSEYFCYDLSQNPIQSSSDEITLSFKTWQRNGLILHTG
KSADYVNLALKDGAVSLVINLGSGAFEAIVEPVNGKFNDNAWHDVKVTRNLRQHSGIGHA
MVNKLHCLVTISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCL
KEVVYKNNDIRLELSRLARIVDPKMKIQGDVVFKCENVATLDPISFETPEAYISLPKWNT
KRMGSISFDFHTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGSLYLLLDMGS
GTIKVKATQNKVNDGAWYHVDIQRDGRSGTISVNSRRTPFTASGENEILDLEGDMYLGGL
PDNRAGLILPTELWTAMLNYGYVGCIRDLFIDGRSKDIRQIAEAQNGAGIKPSCNKMSGK
QCDSYPCKNKGVCKEGWNRFICDCTGTGYWSRTCEREASILSYDGSMYMKVVMPNVMHTE
AEDVSLRFMSQRAYGLLMATTSRDSADTLRLELDGSRVKLTVNLDCIRINCNSSKGPETL
YAGQKLNDNEWHTVRVIRRGKSYKLTVDDDVAEGQMVGDHTRLEFHNIETGVMTERRFIS
MIPSSFIGHLQSLKFNGMLYIDLCKNGDIDYCELNARFGMRSIIADPVTFKSKSSYLSLA
TLQAYTSMHLFFQFKTTSPDGFILFNSGDGSDFIAVELVKGYIHYVFDLGNGPNVIKGNS
DRALHDNQWHNVVITRDNSNVHTLKVDAKAVSQVVNGAKNLDLKGDLYIAGLGPNMYNNL
PKLVASRDGFKGCLASVDLNGRLPDLINDALFRSGQIERGCEASKSELGFTKADLQGPST
TCQEDSCANMGICIQQWENYTCDCSMTSYTGTQCNDPGTTYIFGKGGGLITFNWPANERP
STRTDRLTVGFSTSLKDGILIRIDSAPGLGDYLMLHIEQGKIGVTFNIGTSDITVQESST
AVNDGKYHVVRFTRNGGNATLQVDNWAINEYFPSGNSDNERIQMANKKIPFKYARPVEEW
LQEKGRQLTIFNTQATITIGGSDRKRPFQGQLSGLYYNGLKVLNMAAQGNPNIKINGSVR
LVGEVPSAGSARTTALPPEMSTTFIETTTTMSTTTMRKHPPTIQTTDDMVSSAECSSDDE
DFAECEGHAGGLAIPTEPGIRRVPGASEVVRESSSTTGMVVGIVAAAALCILILLYAMYK
YRNRDEGSYQVDETRNYITNSAQSNGAVMKDKQQSAKSGNKKQKNKDKEYYV
NT seq
4479 nt
NT seq
+upstream
nt +downstream
nt
atgaatttcttcagattcccagtccagttgcagctgctgatcagtactgtgcttgggccc
tgcttgggcctggagtttacagggtcacaaggccagtgggcacgctatctccgctgggac
gccagcaccagaagtgacctcagcttccagttcaaaacagacgtgtccaccgccttaatc
ctgtactttgacgatggcggcttctgcgacttcctgcaactcatggtggtcgaagggaag
ctccagttgcagttcagcatcgactgcgccgagaccacagtcgtatcggacaagcgagtc
aatgacagcagctggcattctgccaccctgagcaggtacaacctgagaactgtgctgggg
ctggacggagcgagcaaatcgggcgaggtgcggccacaaaggcagtacatgaagatcgtt
agtgatctcttcctgggcggagtccctcaagatattcgcatctctgtgctcactctcccg
acagtgaaggatcttccgccgtttaagggaattatcagggaactgaagtacagtaacaag
gaacctattctactaagcagccagagggtccgcatggacatagagggcatctgcatggag
aacccatgcgagaacggaggaacgtgctccgttgtggatggggaaccgctttgtgattgt
tctaagacggaatatgttggccgattctgcaacgaagaggccaacagcatcccaggattt
gcacacatgatgatggctgatcaagccaaaggcaaagcacgagaagagaacgttgccact
ttcagaggttctgagtacttctgctacgacttgtctcagaatcccatccagagcagcagc
gatgagattacattgtccttcaagacctggcaaagaaatggccttatccttcacacgggc
aagtcagcagactacgtcaacctggccctgaaagatggggccgtttcactggtcatcaac
ttgggttccggagccttcgaggccattgtcgagcctgtcaatggaaaattcaacgacaac
gcctggcatgacgtgaaagtcacacgcaacctcagacagcattcaggtattggacacgct
atggtaaacaaactacattgtctggtgacaatatctgtggacggcatcctgaccacaaca
ggctatacgcaggaggactacacaatgctgggatcagatgatttcttctacgtcggagga
agtccaagcacagcagacttgcctgggtcgcccgtcagcaacaactttatgggttgcctg
aaagaggttgtttacaaaaacaatgacatccggctggaactctcccggctcgctcgtatc
gtggatcccaaaatgaagatccagggagatgtggtgttcaagtgtgagaatgtggccacc
ctggaccccatctcatttgagacgcccgaggcctacatcagcctacccaagtggaacacc
aaacgcatgggctccatctccttcgattttcataccaccgaaccaaacggccttattctc
ttcacccacgggaagccgcaggaaagaaaggatgcccgtagccaaaagaacacaaaagtg
gacttttttgcagttgagcttctggatggaagtttgtacctgctgctggacatgggctct
gggacgattaaagtgaaggccacacagaacaaggtgaacgacggggcctggtatcatgtg
gacatccaacgagatggaagatcaggcaccatatctgttaacagccgtcgcactccgttc
accgccagtggtgaaaatgagatcctggacctagagggtgacatgtacctgggcggcctc
cccgataaccgggccggccttatccttcccaccgaactatggaccgccatgctaaactac
ggctacgtgggatgcattcgggacctgttcattgacggtcgcagtaaggacatcaggcaa
atcgctgaggcccagaacggtgcaggcatcaaaccttcctgcaacaagatgtcaggcaaa
cagtgcgacagctatccgtgcaagaacaaaggcgtgtgcaaagaaggatggaatcgcttt
atctgtgactgcacaggcaccggatactggtcccgcacatgtgagagggaggcgtccatc
ttgagctacgacgggagcatgtacatgaaagtggtgatgcctaatgtgatgcacactgaa
gcggaggacgtgtcccttcgcttcatgtctcagcgggcgtacggcctgctcatggccacc
acctcacgcgactccgccgatactcttcggctagagctggacggcagtcgcgtcaaactc
acggtcaacttagactgtatcaggataaactgtaactccagcaaaggaccagagacactg
tatgccggacaaaaactcaatgataatgaatggcatactgtgcgcgtgatccggaggggc
aaaagctacaagctaacggttgacgatgacgtagcagaaggtcagatggtgggcgatcac
acccggttagagttccacaacatcgagacgggcgtaatgaccgagcgccgtttcatctcc
atgatcccctccagtttcatcggtcacctgcagagcctcaagttcaatggcatgctctac
atcgacctgtgcaagaacggtgatatcgactactgcgagctcaacgctcgctttggcatg
cgctccatcatcgcagaccccgtgacgttcaagtcaaagagcagttacctgagtctagcc
accttgcaggcttacacatccatgcaccttttcttccagttcaagacgacctctccagat
ggatttatcctcttcaacagcggggatggaagtgatttcatcgctgtagaactggtgaaa
gggtacatacattacgtgttcgatcttggcaacgggcccaatgtaatcaagggcaacagt
gaccgagctctccatgacaaccagtggcataacgttgtcatcactagagacaacagtaac
gtccacacgctcaaagtcgatgccaaggcagtgagtcaggtcgtcaatggcgctaaaaat
ctggaccttaaaggtgacctctacatcgctggattggggcccaacatgtataacaacctg
ccgaaacttgtggcctccagggatggttttaagggttgcctggcatctgtggacctgaac
ggacgcctgcctgacctcataaacgacgccttgttccgcagcggtcagatcgagcgagga
tgcgaagcatccaaaagtgaacttggtttcaccaaagcagatctacaaggtcctagcact
acatgccaagaagactcctgtgccaacatggggatctgcatccagcagtgggagaactac
acctgcgactgttcaatgacctcctacacagggacgcagtgtaatgaccctggaacaaca
tatatctttgggaaaggaggagggctcataacctttaactggccggccaacgagcgcccg
agcacccgtacagacaggctgacagtgggctttagcacctcgctcaaggatggcatcctg
atccgcatcgacagtgcccccggcctgggagactacctcatgctccacattgagcaaggc
aaaattggagtcacattcaacataggaacgtctgacatcactgttcaggagagcagcacc
gctgtaaatgacggcaagtaccatgtagtgcgcttcacccgaaatgggggcaatgctaca
cttcaggtggacaactgggccatcaatgagtacttcccctcaggtaacagcgataatgag
agaattcaaatggccaataagaaaattcctttcaaatatgcccggcccgtagaggaatgg
cttcaggagaaagggcggcagttaacgatattcaacacccaggccacgataacaattggt
ggttcagaccgcaagaggccatttcagggccagctctctggactctactacaacggcctc
aaagtgctcaacatggcggctcagggcaaccctaacatcaaaatcaatggcagcgtccgc
ctggtcggggaagttccctccgcaggttcagccagaaccacggctctccctccggagatg
tccaccacctttatcgagaccaccaccaccatgtccaccaccaccatgagaaaacaccca
cccacaatacagaccacggacgacatggtctcttcggccgaatgctccagtgacgacgag
gactttgctgagtgcgaaggacatgcaggtgggctagcaatccccacggagccgggcatc
aggcgggttccgggggcctccgaggtggtccgtgaatctagcagcaccaccggaatggtc
gtcgggatagttgccgctgctgctttgtgcatcctaattctgctgtacgccatgtataag
tacagaaacagggacgagggatcctaccaagtggacgagaccaggaattacataaccaac
tcggcgcagagcaatggagcagtcatgaaggacaagcagcagagcgcgaaaagcggcaac
aagaaacagaaaaacaaggacaaggagtactacgtgtga
DBGET
integrated database retrieval system
