Labeo rohita (rohu): 127179468
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Entry
127179468 CDS
T09007
Name
(RefSeq) 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase beta-4 isoform X1
KO
K05858
phosphatidylinositol phospholipase C, beta [EC:
3.1.4.11
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00562
Inositol phosphate metabolism
lroh01100
Metabolic pathways
lroh04020
Calcium signaling pathway
lroh04070
Phosphatidylinositol signaling system
lroh04081
Hormone signaling
lroh04082
Neuroactive ligand signaling
lroh04261
Adrenergic signaling in cardiomyocytes
lroh04270
Vascular smooth muscle contraction
lroh04310
Wnt signaling pathway
lroh04371
Apelin signaling pathway
lroh04540
Gap junction
lroh04621
NOD-like receptor signaling pathway
lroh04912
GnRH signaling pathway
lroh04916
Melanogenesis
Module
lroh_M00130
Inositol phosphate metabolism, PI=> PIP2 => Ins(1,4,5)P3 => Ins(1,3,4,5)P4
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00562 Inositol phosphate metabolism
127179468
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
127179468
04371 Apelin signaling pathway
127179468
04020 Calcium signaling pathway
127179468
04070 Phosphatidylinositol signaling system
127179468
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
127179468
04081 Hormone signaling
127179468
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
127179468
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127179468
09152 Endocrine system
04912 GnRH signaling pathway
127179468
04916 Melanogenesis
127179468
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
127179468
04270 Vascular smooth muscle contraction
127179468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127179468
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.11 phosphoinositide phospholipase C
127179468
Membrane trafficking [BR:
lroh04131
]
Exocytosis
Calcium ion-dependent exocytosis
Phospholipases
127179468
Endocytosis
Macropinocytosis
Phospholipase C
127179468
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PI-PLC-X
PI-PLC-Y
PH_14
PLCB1-4-like_EFh
EF-hand_like
PLC-beta_C
Motif
Other DBs
NCBI-GeneID:
127179468
NCBI-ProteinID:
XP_050988958
LinkDB
All DBs
Position
17:complement(2766333..2854370)
Genome browser
AA seq
1178 aa
AA seq
DB search
MAKPYEFNWLRPVPHFMQEGAYFDRFDEDPFVFESNCFFKVDAFGFFLTWKSEGKEGQVF
EFSLINSIRDTSVPKDPKILSALEAAGKCENNLEGRIICICSGTDLVNLSFMYVVTQNSS
TAKQWTDGLRSLIQNSRANNVCPMTCLRKHWMRLSFLTNVNGKIPVRSITRTFASGKTEK
GIFQALKDLGLPSGKNDEIEHEIFTFDKFYSLTQKICPRTDIEVLFKKLRDKSDYLGVDQ
LVHFLNENQRDPRLNEILFPFFDSKCAFQIIQRYEPDEKLRRKGLMSCDGFCRYLMSDEN
APVFLDRLEVYQEMDHPLSHYFINSSHNTYLTGRQFGGKSSVEIYRQVLLTGCRCVELDC
WDGKGEDQEPIITHGKAMCTDVLFKDVIQGIKETAFLTSEYPVILSFENHCTKHQQYKLA
RYCEDIFGDLLLKQPLDDFPMEAGCPLPSPNDLKGKILIKNRRLKPEVEKKQLEHFKKHM
EAGEPSISTNMSEDENEEEMATAELLNEAHPERIHGCLIAEEEIREEEALRPRKAGETNV
ADEQALIQSYTYVAATTNIHPYLSSIVNYAQAVKFTSFDEAEEKNIHHNMSSFNESVGLG
YLRTNAIEFVNYNKRQMSRIYPKGGRVDSSNYMPQIFWNAGCQMVALNFQTPDLAMQLNQ
GKFEYNGSCGFLLKPDFMRRPDRMFDPFSETPVDGVIAATCSVQVISGQFLSDKKIGTYV
EVDMYGLPTDTIRKEFRTRMVMNNGLNPVYSGEAFVFRKVILPDLAVLRVAVYDDNNKLI
GQRILPLDGLQSGYRHISLRNEYNKPLSLATVFCNIVLKTYVPDGFGAIADALSDPKKFL
SVCEKRTDQMRAMGIEMSDIADVPNDGWMGSKKRKVNSAAMLPQKDSERARAALGQNPFI
CSKEDTSVLAPQLTIDDLKQTKTYLKLVKKQQKDVNALKKKQAKAHAALQSSHSAQVDRT
VAQHDKEKQALEKQLQKSIRKVSDSYSLEMSRDVDRQIKTLTSNHKSKVKDMVAAHALEW
AEMIKWQSAEEHTVREQHVIQQCETLRKLLLMEQEQQTLQLTLLHERQSKEMRTNQAKTS
MESSKAISQDKSIKNKAERERRVRELNSTNTRKFLAERKRLAMKQSKESEQLQAAQREQL
EGLEKHNEELLNSCYAKSQCQGQRDSVHEDSREDRTDR
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaccgtatgagttcaactggctgcggcctgttcctcatttcatgcaggaagga
gcatattttgacagatttgatgaggatccgtttgtcttcgaatcaaactgttttttcaaa
gtggatgcttttggattcttcctgacgtggaaaagcgaaggaaaggaaggtcaggttttc
gagttttccctgatcaacagcatacgtgataccagtgtaccgaaggacccaaagatcctc
tcagcgttggaggccgcgggaaaatgtgagaataacctggagggcagaatcatatgcata
tgcagcggcacagacctggtgaacctcagcttcatgtacgtggtcacgcaaaacagcagc
accgccaagcaatggacagacggcttgcggtcactgattcagaactctcgagcgaataac
gtgtgtccgatgacctgcctgagaaaacattggatgcgattgtcatttttgaccaatgta
aatggaaaaatacccgtcagaagtatcacacgtacctttgcctcgggcaaaacggagaaa
ggtattttccaggcgctgaaggatctcggtttacccagtggaaagaatgatgaaatcgag
catgagatcttcacctttgacaaattctacagccttacgcagaagatttgtcccagaact
gatattgaagtgctgttcaagaaactgagagacaaaagtgattatttaggcgttgaccag
ttagttcactttttgaacgaaaatcagagagatccgcgtctgaatgaaatactcttcccg
ttcttcgactcgaaatgtgctttccagatcatacagcgatatgaacctgatgagaaactg
aggaggaaaggtctgatgtcatgtgacgggttctgtcggtatctgatgtctgatgaaaac
gctcccgtgtttctggaccggctggaggtttatcaggagatggatcatccactgtctcac
tacttcatcaactcgtctcacaacacctacctgaccggcagacagtttggagggaagtcg
tcagtggagatttacagacaggtgctgctgaccggatgcaggtgtgttgaattggactgc
tgggatggaaaaggtgaagatcaggaacccataatcacccatggcaaggccatgtgcacc
gacgtcctcttcaaggacgtcattcagggaattaaagaaacggccttcctgacatcagag
tatcctgtgattctgtccttcgaaaaccactgcacgaaacatcagcagtataaactggcg
cgatactgcgaggacatttttggagatttgctcctaaaacagccgttagacgatttcccg
atggaggccggatgtccgctgccgtccccaaatgaccttaaagggaaaatcctcattaag
aacagaagattaaaacctgaagttgaaaaaaaacagctggagcactttaagaagcatatg
gaagctggagagccgagcatctccacgaacatgtctgaagatgagaacgaggaggagatg
gccactgcagagctgctgaacgaagctcatcccgagcggattcacggatgtctgatcgct
gaggaagagattcgtgaggaagaggcgctccggcccagaaaggctggtgaaacgaatgtg
gctgatgaacaagcactgattcagtcgtacacgtatgtggcggccactactaacatccac
ccgtatctgtccagtatcgtcaactacgcacaggccgtcaagttcaccagctttgatgaa
gccgaagaaaaaaatattcatcacaacatgtcttccttcaacgaatctgtgggtttggga
tatttaaggacaaatgccattgaatttgtgaactacaacaaacggcagatgagtcgcatc
taccccaaaggaggacgagtggactccagtaattatatgccacagatcttctggaacgcc
ggctgccagatggtagcgctgaacttccagaccccagatttggcgatgcagctcaaccaa
ggcaaattcgaatacaacggctcatgcgggtttctgctgaagccggatttcatgcggcgg
cccgatcgcatgttcgaccccttctcagagacgcccgtggacggagtgatcgccgctacc
tgcagcgtccaggtgatttcaggccagtttctgtcggataagaagatcggcacctacgtg
gaggtggacatgtacggcctccccaccgacaccatccgcaaggagtttcggacgaggatg
gtgatgaacaacggcctgaatcccgtctacagcggagaagcgttcgtcttcaggaaggtg
atcctcccagacctcgccgtgctgcgtgtggccgtgtacgacgacaacaataagctgata
ggacagcgcattctcccgctggacggactgcagtcgggttacaggcacatttccctacga
aacgagtacaacaaacccctgtctctggccaccgtcttctgcaacatcgtcctcaaaaca
tacgtgcctgacggcttcggagcgattgcagatgccctgtctgatcccaagaagttctta
tcggtctgtgagaagagaacggaccaaatgagagccatgggcattgagatgtcagacatc
gccgatgtaccgaatgacggatggatggggagtaagaagcggaaggtgaattcagcagcg
atgctaccgcagaaagactctgagagagcgagagcagcgctgggacagaatccattcatc
tgctccaaagaggatacatcagtgctcgcacctcaactcaccatcgatgacctaaagcaa
accaagacctacttgaaactcgtcaagaagcagcagaaggacgtgaacgctttgaagaaa
aagcaggcgaaggcccacgccgcactgcagagctcccacagcgctcaagtggacaggact
gttgctcaacatgataaagagaaacaagcgctggagaagcagctccagaaaagcatccgg
aaagtgagtgacagttacagccttgaaatgagtagagacgtcgaccggcagatcaagact
ctaacgagcaatcacaaatcaaaggtgaaggacatggtcgccgctcacgcgctcgaatgg
gcagaaatgatcaaatggcagtcggctgaagaacacaccgtgagagagcagcacgtaatt
cagcagtgcgagacgctccgaaaactccttctgatggagcaggagcagcagacactgcag
ctcacgctcctccatgaaagacagagtaaagagatgcgaaccaaccaagcgaagacctcg
atggagagcagcaaagccatcagtcaagacaaaagcataaagaacaaggctgagagggaa
cggagagttcgtgagctcaacagcacaaacacaaggaagtttcttgcagaaagaaagagg
ctcgccatgaaacagtccaaagagagcgaacaactccaggcagctcagcgggaacaactg
gaggggctggagaaacacaatgaggagctgttgaactcgtgctatgcaaaatcacaatgc
caaggccagagagattcagtgcatgaagacagcagagaggacagaacagaccgctga
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integrated database retrieval system
