Labeo rohita (rohu): 127179471
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Entry
127179471 CDS
T09007
Name
(RefSeq) transcriptional-regulating factor 1 isoform X1
KO
K26583
transcriptional-regulating factor 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127179471
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
MiDAC complex
127179471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ELM2
zf-C2H2_6
zf-C2H2_4
Myb_DNA-binding
zf-C2H2
zf-C2H2_2
Myb_DNA-bind_7
zf-C2HE
Myb_DNA-bind_6
zf-met
Motif
Other DBs
NCBI-GeneID:
127179471
NCBI-ProteinID:
XP_050988964
LinkDB
All DBs
Position
17:4097325..4116762
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AA seq
1020 aa
AA seq
DB search
MTENLYETSQFTNHTNGTYLFQHSPSALGGPHYGVPNVSSIQSSPMSPRLNHEQLTSPGT
PGHELSPMLEMPNSGGTWEYNQFGRTSSWGSSSHEELPETSRIYPFNITSQNNTSLSCKD
NGSASHHQMLDSFSKAFPTKNIQLHFGDSNRTDDKHSESHISGVLHLPQSLSDGSDRQAL
ESPVYNPMVIQGQCDQAGFHPSESQNPLHSLYQNNQQFHYGYHQHKPKVNNMEQVNRSLQ
KPQSSWHSYQSHPMSYPMTLNQQQRGIFAHKTHLDSHEPVQSPTYDHRQDFKVPEQQIFH
YQDQQHLRSLSQPGNPYLAQDHVQTIPAKHNNVFSDAHHSAPNTPVFSSPKDDQSGFNFP
HRSEDLCSPLYQNKSSGVCKTLPQMTLRGDIFHHLTTHASQWSQAPSPDIQDEAISPHFR
AEPGLSREDGSHPKMRCTVCHREFKSLPALNGHMRSHGGLRTQPTSLKTRDGHINLSESA
QTNPIILPVSVPVKDYPNKLTISLLCHQKDDEQSGLIKSGTQSPLPSVRNHPSCVKRSIL
DGECVPKQVKKRYRHCLVPLMIPPPSAGQESRGAVLFRSQLRTPSSMGDDVPYTPPPMLS
PVRPGSGLFSAISGRGKSSRIESVADGAGDMDDCGETAREKAVNVTPHINVGEDFQAKIP
DIKGQTLTEEDTHNAVLLWSPSKDLDTPDNQQNVDDLLKMACSSVLPGGGANTEYVLHCL
FECRGDIMNTLEKLLLQTLPRNTSSPKTDYHYAGSDRWTLQEKRQLNKALLMHNKDFYLV
QKMVKTKSVSQCVEYYYTWKKRLRLGTRVSTALSTPVQDQRGDWPIINTAEPNKEADSKI
REAEISENSSTMFVNCEVSNSQMSEETWTQNNLRLLCSSPAENRASSLTLPLGSASVRSS
PSNSTTSGDTDSAVVFPCTECGKVFLKVKSRNAHMKTHRQQEDIQLWHFPRASEQGHAMM
TPECPVTPLKQPISLHSLTCGRTGEVKASINDMCSESVQEIDCPLKTLPVLQSPLDYITS
NT seq
3063 nt
NT seq
+upstream
nt +downstream
nt
atgacggaaaacctatacgagaccagtcagtttaccaaccacaccaacgggacttatttg
ttccagcacagcccaagcgcactgggtggacctcactatggtgtaccaaacgtgagctcg
atccaatcatctccaatgtctcctcgactcaaccacgagcagctaacatctcctggcact
ccaggacatgaactttctccaatgcttgagatgccaaacagcggcgggacttgggaatat
aatcagtttggacggacatcatcatggggatcttcttctcacgaagaactgcctgaaacc
tctcgaatctatccgttcaatatcacgtctcaaaacaacacttcactgagttgcaaggac
aacggcagtgcttctcatcatcaaatgctggactcgttctcaaaggcctttcctacgaaa
aacatccaacttcattttggcgatagcaacaggactgatgataaacattcagaaagtcac
atttcaggggttttgcacttgcctcagagtctttcagatggatcagacaggcaggctttg
gagtctccagtttataacccaatggtcattcaaggtcaatgcgatcaggctggattccat
ccatcggaaagccaaaacccactccacagcctttaccaaaacaaccaacagtttcactat
ggataccaccaacacaaaccgaaagtgaacaacatggagcaggtaaacaggagtctccag
aagccacagagctcttggcacagctatcaaagtcatccgatgtcatacccaatgactttg
aatcaacaacaacgagggatttttgcacataaaactcatctggactctcatgaacctgtt
caatcgccaacctacgaccaccgtcaagacttcaaagtcccggagcagcagatcttccat
taccaagaccaacaacatcttcgttcgctttcccaacctggcaatccttacctcgcgcaa
gatcacgtgcaaacgatccccgcaaagcacaacaacgtgtttagtgacgctcatcactcg
gcacccaacacaccagtgttctcgagtcccaaagacgatcaatctggtttcaacttccca
caccgaagtgaagacctctgcagtccgctttaccaaaacaaaagctcaggggtctgtaaa
actcttccacagatgactttgaggggggatatttttcatcatctcaccacacatgcgtct
cagtggtcacaggcaccttcaccagatattcaagatgaggccatttcacctcatttcaga
gcagaacctgggttgtcgagagaagacggatctcatccaaagatgcgatgtaccgtttgt
cacagagagttcaaaagtcttccagctctgaacggtcacatgcgctcacatggaggactg
cggacacaacccacatctctcaaaacgagagatgggcacattaatctgtctgagtctgct
caaaccaaccccatcatcttacctgtgtcagtacctgtcaaggactacccaaacaaactc
acgatcagccttctgtgccaccagaaagacgatgaacaaagcggtttaattaagtccggt
acacagtcacccctgccgtctgtacgaaaccacccttcctgtgtcaagagatccatcttg
gatggagaatgtgtaccgaagcaggtgaaaaagaggtaccgtcactgtctggtcccactg
atgattcctccgcccagcgccggtcaggaatccagaggtgctgtactcttccgcagtcag
ctgaggacgccgagcagcatgggggacgacgtgccgtacacccctccgcccatgctcagc
cccgtacgcccgggatcaggcctcttcagtgccatcagtggaagaggcaagagcagcagg
attgaatctgttgcagatggggctggtgatatggatgactgtggtgagactgcaagagag
aaagcagttaatgttacacctcatattaacgttggtgaggattttcaagcaaagatccca
gacattaagggtcaaaccctcacagaggaagatacccataatgctgttcttctgtggtca
ccctccaaagacctggatacccctgataaccagcagaacgtggacgatcttctgaaaatg
gcatgctctagtgtgctaccaggtggtggagcaaacacagaatatgtcctgcactgtctt
ttcgagtgcagaggagatattatgaacacccttgaaaagcttctcctgcaaacattgccg
agaaacacatccagccccaaaacagactatcattacgcaggatcagacagatggacgctt
caggaaaaacggcagctgaacaaagcacttttaatgcataacaaagacttctatcttgtc
cagaaaatggtcaaaacaaagtcagtttctcagtgtgtcgagtactattacacatggaaa
aagcgtttgcgcttgggtacgagagtcagtacggctctgtctacacctgttcaagaccag
cggggcgactggccgataatcaacacagcagaaccaaacaaagaagccgacagcaaaatc
agggaagctgaaatatcagaaaactccagcaccatgtttgtcaattgtgaagtttcaaac
tctcagatgagcgaagaaacatggacccagaacaacctccggctgctttgtagctctccg
gccgaaaacagagcatcctcgctgaccctgcctttgggttcggcttctgtgagaagttct
ccctccaacagcacaaccagtggagatactgattcagccgtcgtctttccctgcacagag
tgtggaaaggtgtttttaaaggtgaaaagtcgaaatgcccacatgaagacacaccgacag
caggaggacatacaattgtggcattttcccagggcttctgagcaaggtcatgcaatgatg
acacctgaatgtcctgttacaccattaaaacaacccataagccttcattctttaacatgt
ggcagaaccggggaggtgaaagcatcgataaatgacatgtgcagtgagtcagtacaggaa
atcgactgccctctgaagacacttcctgtcctacagagtccactggactatattacaagt
tag
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