Labeo rohita (rohu): 127179512
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Entry
127179512 CDS
T09007
Name
(RefSeq) F-box only protein 33
KO
K10310
F-box protein 33
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127179512
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
127179512
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
F-box-like
F-box
LRR_8
LRR_4
LRR_14
Motif
Other DBs
NCBI-GeneID:
127179512
NCBI-ProteinID:
XP_050989029
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Position
17:7901396..7912792
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AA seq
484 aa
AA seq
DB search
MALCSSVGALALPSELIVHIFSFLSDRDKLRASAVCSRWRECLFYPALWTELKLRVGGGS
NGGGSGSEQTPRLEFLMRKFGSFVRELQLEFAPLDGYLSPLQHGMEAVESDPQFAKDAMV
TYLDQVLCVLGSLRNNRNLQKLSLYGDTCILQDDGILDSSYLSQVDQGGKKMKEIQQLFE
EILSNSRQLKWLSSAFMLGVVTPCSLASLSNPSTSSLEHLSLIDNQLPSLISTVELERLT
NLRSLSLDFCDFTSDTCRLLAGGDRAPLHRLSLLLNGAALDVKPLDGTATEDDWKALVRR
STNLRVYIMAMDVCSQDLLRVLKPSVPLERIHLDSYSTLVTDGVVELISQQYHKTLSHFI
LMRDDAGFPDLSVNRNEDPLVLLAWRCVHLAVLIIHGYTVWSHNLVAISRLRGSNLKVLE
VSEESIDFDPDQSVYMEGDPVHNLVKEVSLGLGRVWHPSMDNSVVLNEPTQHFHREMQSF
SAGM
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtgcagtagcgtcggagccttggcgttacccagcgagcttatcgttcacatc
ttctccttcctgtcagaccgagacaagctccgggcctcggccgtatgctctcgctggagg
gagtgtctcttctaccctgcgctgtggacggagctcaagctgcgcgtcggtggcggatcc
aacggcggcggatctggatcagaacaaaccccgcggttagagttcctcatgcgcaagttc
ggctccttcgtgcgggagctgcagctggagttcgccccgctggacggctacttaagcccg
ctgcagcacggaatggaagccgtcgagagcgacccgcagttcgcgaaggatgcgatggtg
acatatttggatcaggtgttgtgtgtgctcggcagtctgcgtaataacagaaacctccag
aagctgagtctctatggggacacatgcattcttcaggatgatgggattttagatagctct
tacctcagccaagtcgaccaagggggcaagaaaatgaaagagattcagcagctctttgaa
gagatcctgtccaatagcaggcagttgaagtggttgtcgtctgcgttcatgctaggtgtg
gtgactccctgctctctggcctcgctttccaaccccagcaccagctctctcgagcacctc
agtctgatcgacaaccagctgcccagcctgatttccaccgtcgaactggagaggctcact
aacctgcggtctctgtcgctagacttctgcgatttcacctcagacacgtgccgtctcctc
gccggcggtgaccgagcgcccctccaccgcctctccctcttgctcaacggcgctgctttg
gacgtcaagcctttggatggtaccgcaaccgaggatgattggaaagccctggtccgtcgc
agcaccaacctgcgtgtctacatcatggcgatggatgtgtgtagccaggatcttctgcgt
gtgctgaagcctagcgtgccactggagcggatccatctggacagctacagcacactggtg
acggatggggtcgtggagctcatctcgcagcagtaccacaaaaccctcagccacttcatc
ttgatgagagacgacgctggattcccagacctcagcgtcaaccgcaacgaggacccgctg
gttctccttgcctggcggtgtgtgcacctcgctgtcttgatcatccatggctacactgtg
tggtcgcacaacctggtggccatctctcgcctgcgtgggtccaacctcaaagtcctggag
gtgtccgaagagagcattgactttgacccagaccagtcggtgtacatggagggcgacccc
gtccacaatctagtcaaggaggtgtccctgggcttgggccgcgtctggcatccctccatg
gacaacagtgtggtcctgaacgaacccactcagcacttccaccgcgagatgcagagtttc
agcgcgggcatgtag
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