Labeo rohita (rohu): 127179551
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Entry
127179551 CDS
T09007
Symbol
u2surp
Name
(RefSeq) U2 snRNP-associated SURP motif-containing protein isoform X1
KO
K12842
U2-associated protein SR140
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127179551 (u2surp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127179551 (u2surp)
Spliceosome [BR:
lroh03041
]
Complex A
U2 snRNP components
U2 related factors
127179551 (u2surp)
Complex B
127179551 (u2surp)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Surp
RRM_1
cwf21
CID
CTK3
RRM_7
SET_assoc
Motif
Other DBs
NCBI-GeneID:
127179551
NCBI-ProteinID:
XP_050989106
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All DBs
Position
2:complement(18442372..18456853)
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AA seq
966 aa
AA seq
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MADKTPGGAQKANSKALLESKLKAFSIGKMAVAKRTLSKKEQDELKKKEDERAAAEIYEE
FLAAFEGGEGKVKTFVRGGIANATKEEAAADEKKGKLYKPKSRVLEAKSFLPLETPPQFL
ALDKRNASKKGDKEKKKSNLELFKEELKQIQEERDERHRLKGRVSRFEPLPTMEGRRSSD
GSSRRNRPSSVLDDSAPGSHDVGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIM
WPRTDEERARERNCGFVAFMTRRDAERALKHLNGKMIMNFEMKLGWGKGVPIPPHPIYIP
PSMMEHTLPPPPSGLPFNAQPKERLKNPNAPMPPPPKCKEEFEKTLSQAIVKVVIPTERN
LLSLIHRMIEFVVREGPMFEAMIMNREINNPLYRFLFENQSPAHVYYRWKLYTILQGDSP
TKWKTEDFRMFKNGSIWRPPPLNPYLHGTPEDEEHDDDDDEEISKKGALKDDERDKLEEL
LRGLTPRKSDIADAMFFCLTHADAAEEIVECIAESLSILKTPLPKKIARLYLVSDVLYNS
SAKVANASYYRKFFETKLCQIFSDLNATYKTIQGHLQSENFKQRVMSCFRAWEDWAVYPD
PFLIKLQNIFLGLVSLDPEKETPELLPEPPERSEDIDGAPIVEEELDGAPFDDVDGMPID
GAPIDGAPLDDLDGMPIRGTDDDLDGVPLDQKPGFKVAPSKWEEVDGSALEAQAVTTSKW
EIFDMPDESEKSKTSAKRETESKDSLKSSSAADHQSYSNPVREEYDLKSAKFSEMSEEKR
AKLREIELKVMKFQDELESGKRPKKSGQSIQEQVELYRDKLLQREKEKETEKDKEKEKER
KDKEKSDVFHKEKDKDDSTPGRKEKKRRHSPSPSPTRSSSSRRGRSPSPRSERSDRSYTK
DSSRSSYKDSPRDSNRKSSKRSPSPPRTPKRSRRSRSRTPKKSSKKSRSRSRSPHRSHKK
SKKSKH
NT seq
2901 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaaaacgccaggtggggcgcagaaagccaactctaaggctttattggaaagt
aagttaaaggctttcagtattggcaagatggcggttgcaaaaagaacactaagtaaaaaa
gagcaagatgaactcaagaaaaaggaggatgaaagggcagctgcagagatctatgaggaa
tttctcgccgcctttgagggaggtgaaggaaaagtgaagaccttcgtacgtggtgggatt
gctaatgctactaaagaggaagcggcagctgatgaaaagaaaggaaagctctacaaacca
aaatcaagggttttggaggcaaaaagttttttacctttggaaactcctccacagttttta
gcattagataaacgcaatgcatcaaagaagggagacaaagaaaagaaaaagagcaacctt
gaactcttcaaagaagaactgaaacagatacaggaggagcgtgatgaacggcaccggttg
aagggccgagtcagtcgttttgagcctcttcccacaatggaaggaaggcgatcctcggat
ggttcttcacgaagaaaccgtccgtccagtgttttggatgattctgctcctggctcacac
gatgttggagatccgacaactaccaatctctatttgggtaacataaatcctcagatgaat
gaggagatgctttgtcaggaatttggtcgctatggtccattagccagtgtgaaaattatg
tggcccaggactgatgaggaaagggccagagaaaggaactgtggttttgtagccttcatg
acgaggagagatgctgaacgtgcacttaaacatttaaatgggaaaatgataatgaatttt
gaaatgaaactgggatggggcaaaggtgtaccaattcctcctcaccccatatacattcca
ccttcaatgatggagcacaccctcccgcctccaccctctggactgcccttcaatgcccaa
cctaaagagaggctgaagaaccccaacgctcctatgcctccccctccgaagtgcaaagag
gagtttgagaagactctgtcgcaagccatagtcaaagtggttatcccaacagaaaggaat
ttgctctctctcatccatcgaatgatcgagtttgtggtgcgtgagggtccaatgtttgaa
gccatgatcatgaacagagagatcaacaatccgctctacaggtttttatttgaaaatcaa
agtcctgctcatgtttattaccggtggaagttgtacaccatattacagggggattctcca
acgaaatggaaaacggaagacttcagaatgtttaaaaacggctctatctggcgaccgcca
cctcttaacccatatttacatggcactcctgaagacgaggagcatgatgatgacgatgat
gaagaaatcagcaagaagggcgccttgaaagacgacgagagggataaattggaggagtta
ctccgaggtctcacgccgaggaagagcgacatagctgacgccatgtttttctgcctcacg
catgctgacgcagccgaggagattgtagaatgcatcgccgagtctctatccatacttaaa
acacctctgccaaagaagattgcaaggttatatttggtgtcggatgtgctgtataactca
tctgcgaaagttgctaatgcttcctattacagaaaattctttgaaacaaaactctgccag
atattttctgacctaaatgccacttataagacaatacagggccatttacaatctgagaat
ttcaagcaacgagtaatgtcctgtttccgtgcgtgggaagattgggcggtgtatcccgat
ccattcctgattaaacttcagaacatctttctgggactcgtcagccttgatcctgaaaag
gagactccagaactgttgccagagccgccggaaaggtcggaagacatcgatggcgctcct
attgtggaagaggagctggatggtgctccatttgatgatgttgacggcatgcccatagat
ggagcgccaatcgatggtgcaccacttgatgacctggatggaatgcccatcaggggaaca
gatgatgatctggatggtgttcctttggatcaaaaaccaggctttaaggtagccccatca
aaatgggaggaagtggatggttctgctttggaggcacaagctgtaaccacgtcaaaatgg
gaaatctttgatatgccagatgaatcagagaaaagtaaaacaagtgcaaaacgtgaaacc
gagagtaaagactctctcaagagctccagtgctgcagaccaccagtcctacagtaatcct
gttagagaagagtacgatttaaagtctgccaagttttctgagatgagcgaggagaaacgt
gccaaacttcgagaaatcgagcttaaagtcatgaagtttcaagatgagcttgaatctgga
aaacgacctaaaaaatctggacagagtattcaagaacaagtagagctttaccgggacaag
ttgttacagcgggagaaggagaaagagacagaaaaagacaaagagaaagaaaaagagaga
aaagacaaagagaaatctgacgtgttccacaaagagaaggacaaagatgactcaacacca
ggcagaaaagaaaaaaaacggaggcatagtccctcccccagtcccacccgaagtagcagc
agtaggcgcggcaggtcgccctcgccacgatccgagcgctccgatagatcctatacaaaa
gacagctctcgatcgtcttataaagactctccaagagacagtaaccgcaagtcatctaaa
aggtctccttcacccccaagaacacctaagaggtcgcggaggtccagatcaagaacgccc
aaaaaatcctcaaagaaatccagatctcggtcacgatcgcctcaccgctctcacaagaaa
tccaaaaaaagcaaacactga
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