Labeo rohita (rohu): 127179571
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Entry
127179571 CDS
T09007
Symbol
rorcb
Name
(RefSeq) RAR-related orphan receptor C b
KO
K08533
RAR-related orphan receptor beta
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127179571 (rorcb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127179571 (rorcb)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127179571 (rorcb)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
127179571 (rorcb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127179571
NCBI-ProteinID:
XP_050989147
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Position
2:34377807..34396454
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AA seq
486 aa
AA seq
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MRAQIEVIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQNNAMYSCSRQRNCLIDRTNRN
RCQHCRLQKCLALGMSRDAVKFGRMSKKQRDSLYAEVQRHQQLSQECLAGLGGGLAPRDR
EETGDDSAHSRPYSSGGSSSNLSDLDDIATLPDGLLFDLPLTPEEAGEYCALEMLGGGGG
FGSAGSGSSSNQSSPEPSTVDLADVARVKHEYILPENSLLTHTLLGSLPDNCSLHDIDRI
TQNVVKSHLETCQYSTEELKKLTWNLYTPEETRCFQLKSAEWMWQQCALHITNAIQYVVE
FAKRISGFMDLCQNDQIILLKAGCLEILLIRMCRAYNSSNNTMFFDGKFASPQLFKALGC
DDLVNAVFELAKSLSRLQLSEEEMALFSAAVLLAPDRPWLTESQQVQKLQEKVYVALQHS
LHMNGATTEKLDKMVSKLPQMKSICNLHIDKLEFFRLVHPETAYSFPPLYREVFGSEINF
PDSTNS
NT seq
1461 nt
NT seq
+upstream
nt +downstream
nt
atgagagctcaaattgaggttataccttgtaagatctgtggcgacaaatcctctgggatc
cactatggcgttattacatgtgaaggatgcaagggctttttccgacgcagccagcagaac
aatgccatgtactcgtgttcgcggcagaggaactgcctgatcgaccgaaccaacaggaac
cgctgccaacactgtcgtctgcagaagtgcctggcgctcggcatgagccgtgatgcggtg
aaatttggccgaatgtcaaagaaacagagggacagcctgtacgcggaggtgcagcggcac
cagcagctgtctcaggagtgcctggcgggtttgggtggtggtctggcaccacgtgaccgt
gaagagacaggcgacgacagcgcacacagccggccgtacagcagtggaggatccagctcc
aatctcagcgacctggatgacattgccacgctacccgacggcttgctttttgacctaccg
ctcaccccagaggaggcgggcgagtactgcgctctagaaatgctcgggggcggcggaggg
ttcgggagtgccggaagcggtagctcatccaatcagagctctccagagcccagcactgta
gatttggcagatgtggcgagggtgaagcatgagtacatcctgcctgaaaacagccttctt
acgcacactctcctggggtctttaccagacaactgctctctacacgacatagaccgaatc
actcaaaatgttgtgaagtctcacctggagacgtgtcagtacagcacagaagagttgaag
aaactcacctggaacctctacacacctgaagaaacccgctgctttcagctcaagtcggca
gaatggatgtggcagcagtgcgccctacacattacaaacgccatccagtacgtggtagag
ttcgctaagcgcatctctggattcatggacctctgccagaacgaccagatcatcctgctc
aaagcaggatgtctggaaatcctgctgatccgaatgtgccgcgcttacaactcttcgaac
aacactatgttttttgacggcaagttcgccagccctcagctcttcaaagctctcgggtgt
gatgacctggtgaacgccgtctttgaattggctaaaagcctgagtcgacttcagctgagc
gaggaggaaatggctttattcagcgcagcggtcctgctggctccagatcggccgtggttg
acagagtctcagcaggtgcaaaagctccaggagaaggtttacgtggctcttcaacacagc
ctgcatatgaacggagccactactgagaaactggataagatggtgtccaaactaccgcag
atgaagtccatctgtaacctgcatattgacaagctggagttcttccgcctggttcacccg
gaaacagcctacagcttcccgcctctgtacagggaagtgttcggcagcgagatcaacttc
cctgactccaccaacagttag
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