Labeo rohita (rohu): 127179584
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Entry
127179584 CDS
T09007
Symbol
tbpl2
Name
(RefSeq) TATA box-binding protein-like 2 isoform X1
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127179584 (tbpl2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127179584 (tbpl2)
03021 Transcription machinery [BR:
lroh03021
]
127179584 (tbpl2)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
127179584 (tbpl2)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
127179584 (tbpl2)
RNA polymerase III system
TFIIIB
127179584 (tbpl2)
RNA polymerase I system
SL1/TIF-1B
127179584 (tbpl2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
Motif
Other DBs
NCBI-GeneID:
127179584
NCBI-ProteinID:
XP_050989164
LinkDB
All DBs
Position
17:6670008..6674352
Genome browser
AA seq
311 aa
AA seq
DB search
MDEEAALENYFDQTIAGSSDYIFEGDLGLQGPAPQLQDSSFLSSLTSQDKDLTEDLDLSF
LPDELSTQDEPSQAENVSRNEDSGIYTDCPPQESTEADTDTSNSAQNASQFNLPMTPMTP
MTPMTPVAESSGIIPQLQNIVSTVNLACPLDLKSIALQARNAEYNPKRFAAVIMRIREPR
TTALIFSSGKMVCTGAKSSEEQSRLAARKYARVVQKLGFPAKFLDFKIQNMVGSCDVCFP
IRLEGLVLTHQQFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKERSEIYEAFEN
IYPILKGFRKQ
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atggatgaggaggcagccctcgaaaattactttgaccagactattgctggttcatctgat
tacatctttgagggggatctgggcctacagggtccagctccacagctccaggattcctct
ttcctctcctctttaacgtctcaggacaaagatctcactgaagacttggacctgagcttc
ttacccgatgaactgagcactcaagatgagccgtcacaggctgagaatgtcagcaggaac
gaggacagcggcatttacaccgactgtcctccgcaagagtcgacggaggcagatactgac
accagtaattctgcccaaaacgcctcgcagttcaatctcccgatgactcccatgacccct
atgacccccatgaccccagtggcagagagttcaggcatcatcccacaattacagaatatt
gtgtcaacagtgaatcttgcttgccctctggatctcaaatccattgcacttcaagctcga
aatgctgaatacaacccaaagcgttttgctgccgttataatgaggatccgtgagccaaga
actactgctctcatattcagctctggaaaaatggtctgcactggggccaagagcagtgag
gagcaatctcgccttgctgcgcggaaatatgcacgggtggtacagaaacttggtttccct
gccaaattccttgactttaaaatccaaaacatggttggaagttgtgatgtctgctttcct
atacgcttagaaggcctagtcctcactcaccagcagttcagcagctatgagccagagttg
tttcctggattgatatatcgcatggtgaagccacgtattgtgctgctgatttttgtgtct
ggaaaagttgtgcttacaggtgcaaaagagcggtcagagatctatgaagcctttgaaaac
atttaccccatcctcaaaggattcagaaagcagtag
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