Labeo rohita (rohu): 127179835
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Entry
127179835 CDS
T09007
Symbol
ppp2r5ca
Name
(RefSeq) serine/threonine-protein phosphatase 2A 56 kDa regulatory subunit gamma isoform isoform X1
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03015
mRNA surveillance pathway
lroh04110
Cell cycle
lroh04114
Oocyte meiosis
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
127179835 (ppp2r5ca)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
127179835 (ppp2r5ca)
04114 Oocyte meiosis
127179835 (ppp2r5ca)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
127179835 (ppp2r5ca)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
lroh01009
]
127179835 (ppp2r5ca)
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127179835 (ppp2r5ca)
03036 Chromosome and associated proteins [BR:
lroh03036
]
127179835 (ppp2r5ca)
Protein phosphatases and associated proteins [BR:
lroh01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
127179835 (ppp2r5ca)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
127179835 (ppp2r5ca)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
127179835 (ppp2r5ca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
127179835
NCBI-ProteinID:
XP_050989547
LinkDB
All DBs
Position
17:144191..161398
Genome browser
AA seq
537 aa
AA seq
DB search
MPHKSKKDKSVRSSRRGSKQHEVDQDSETENKSGGSRKPPSTQLLRSKQPPGQSALKKHR
RLSASCFPISLNRELLPLDALTDVAPAEQEKLFIQKLRQCCVLFDFLSDPLSDLKWKEVK
RAALSEMVEYITHNRNVITEPIYPEVVHMFAVNMFRTLPPSSNPTGAEFDPEEDEPTLEA
AWPHLQLVYEFFLRFLESPDFQPNVAKKYIDQKFVMQLLELFDSEDPRERDFLKTTLHRI
YGKFLGLRAYIRKQINNIFYRFIYETEHHNGIAELLEILGSIINGFALPLKEEHKIFLLK
VLLPLHKVKSLSVYHPQLAYCVVQFLEKDSTLTEPVVMALLKYWPKTHSPKEVMFLNELE
EILDVIEPSEFVKVMEPLFRQLAKCVSSPHFQVAERALYYWNNEYIMSLISDNAAKILPI
MFPALYRNSKSHWNKTIHGLIYNALKLFMEMNQKLFDDCTQQFRAEKNKEKAKLKEREEA
WMKIESLAKSNPQMSREQRKERPLVRRKSDLPQDSYTTKALETHRRAEDMLTNHDGH
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgccgcacaagtcaaagaaagacaagtctgtcagatccagcaggaggggaagcaaacag
catgaagttgatcaggactctgaaactgagaataagagcggcggctccaggaaacctccc
agcacacagctgctgcgctccaagcagccgcccggccagagcgccctgaagaaacaccgc
cgactgagcgcctcgtgtttccccatcagcctcaacagagagctgctgccgctggacgcg
ctgacagatgtggctccggccgagcaggagaagctcttcatccaaaagctgcgtcagtgc
tgcgttctgttcgacttcctgtccgatccgctcagcgacctgaaatggaaggaagtgaag
cgggcggcgctgagcgagatggtggagtacatcacccacaatcgcaatgtcatcacggag
cccatttacccggaggtggtgcacatgtttgccgtgaacatgttcaggactctgccgcct
tcatccaacccgacgggagcagaattcgacccggaggaggatgaacccactcttgaagca
gcgtggcctcatctacagctggtgtacgagtttttcctgcggtttttagagtcgcctgac
tttcagccgaacgttgcaaagaaatacattgatcagaagtttgtgatgcagcttctggag
ttgtttgacagtgaagatccacgagagagagatttcctgaaaaccaccctgcaccggata
tatggaaagtttcttgggctgcgggcttacattagaaagcaaattaataacatattttac
aggtttatttatgagacggagcatcacaacggaatcgctgaattactggagatcctggga
agcatcatcaacggcttcgctttacctctgaaagaagagcacaagatcttcctgctgaag
gttttattgccgctgcacaaggtgaagtctctgagcgtctatcacccgcagctggcgtat
tgtgtggttcagttcctggagaaggacagcacgctcaccgaaccggtggtcatggctctt
ctcaagtactggcccaagactcacagtccgaaggaggtgatgttcctcaacgagctggag
gagatcctggacgtgatcgagccgtccgagttcgtgaaggtgatggagccgctcttccgt
cagctggccaagtgtgtgtccagtccgcactttcaggtggcggagagagcgctttattac
tggaataacgagtacatcatgagtctcatcagcgacaacgcagccaagatcttacccatc
atgttcccggcgctttaccgcaactccaagagccactggaacaagaccattcacggtttg
atctacaacgcactcaagctcttcatggagatgaaccagaagctgtttgacgactgcacg
caacagttcagagccgagaagaacaaagagaaggcgaagctgaaggagagagaagaggcc
tggatgaagatcgagagtctggccaagtcaaacccgcagatgtcgagggagcagaggaag
gagcgtccgctcgtccggcgtaaatctgatctgcctcaggactcgtacaccacgaaagcc
ttggagacgcaccggcgcgccgaagacatgctgaccaaccacgacggccactag
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