Labeo rohita (rohu): 127179901
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Entry
127179901 CDS
T09007
Symbol
rin3
Name
(RefSeq) ras and Rab interactor 3
KO
K23687
Ras and Rab interactor 2/3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127179901 (rin3)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
127179901 (rin3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RIN1
VPS9
RA
RA_3
RA_2
SH2
TUG-UBL1
Motif
Other DBs
NCBI-GeneID:
127179901
NCBI-ProteinID:
XP_050989672
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All DBs
Position
17:22029802..22051275
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AA seq
1067 aa
AA seq
DB search
MLSPGPSTAPSGLSKPSSPTISTRIQASFHPQTSSSLTSSPTFPLVDISDNPSPDPASHP
LSASPPISCVQPSSPQLNSKPSPPPQKPMSPQVPKPPLPAQLPSSLPKSSSTALPRPPPP
TVRPSSPPQPRPPPPVVQKPPVPTSPVSKTNKPIPPGISILEKLIKTCPVWLQLGMKQDK
AKNILSKEFPGIFLVRRDASQKTMILAVRLSDQLGEPHVKELPIKEEKSLLYLEGSVLVF
ENIFKLIAFYCVSRDILPFPLKLPQVIQKVAKYEDMEVISSLGSEFWNSALNSHEEMESI
AGSCGALDRQGQSSSCEIQISIGSDRLWYVNPIFIEECSNSLPTTSSAPVLRTQSLNTPV
QVPPKYKRPPPVRPRPPSAPDCSQNCALAKPSKGEFKTVLSSPPPSVQKGEGSDCERADR
EQERQGTPASSTERGKPAVLQPAQGKEGKQLSNTASHRVPPIPIRRRLSEKQPSEEATQQ
EVHTSTSTEAEDNILQVPVASLICLDDSMEERDKPMDPEPQQLQEVPVEESKVTNGAPTV
VAPQPKKPNAPVAPPRKKRLSQNLTGQVSNSTVNSLTPIPQESTVPLNSSSPSQIRHSLC
ISAGHPKVSDVSLYSPEGGAPPDHDSYSTSSTEEEADAIAATGTAIKRTPTIMLDRAKQR
LSMVSMANLSNVLTGFMNADRKLQKRIVEMSRDGNTYFGNLVKDYRAFTLDTMRKHTSST
EMLQEIRQMITQLKSYLIQSAELQNLQEAAGYSEEKLEIIIEAALCKSVLKPIREAVYNG
LKDIHSRSGNLKKLKENQQVVQGTTTTDLGVTTSVPEMTVMEKIQTKLGNLHQEYSPQKK
IDLLLKTCKIIYESMSVGCPGKAHGADDFLPVLMYVLARCNISALLLDVEYMMELMDPAL
QLGEGSYYLTTTYGALEHIKNFDKQAVTRQLSLEIQDSIHRWERRRTLNKARASRSSVQD
FINVSFLEAGSNTKTLGLRPNTTAQDLCNQCAEKFDVLDSESYCLSVLVDGHYKPLAPEE
FPLTIKSTLHHSEPRKEYYFVYRHGRWPEQESVDETPSTATPEESLI
NT seq
3204 nt
NT seq
+upstream
nt +downstream
nt
atgctctcccctggcccttccacagcgccttcaggcctctccaaaccctcttccccaacc
atatctacacgtattcaggcatccttccatccacaaacctcttcttccttgacttcttct
ccaaccttcccgttggttgatatctctgacaacccatcccctgaccccgcctcccatccg
ctttctgcttcacccccaatctcatgtgtacaaccttcctcacctcagcttaactccaaa
ccatcgccacctccccagaagcccatgtctcctcaagttccaaagccacccctcccagca
caactcccctcttctcttcctaagagctcctccacagccctgcctagaccacctccacct
accgttagaccctcatctccacctcaacccagaccacctccaccggtagtccaaaaacca
ccagtacccacatctccagtgagcaagaccaataaaccgattcctcctggtatcagcatc
ctggagaagctgataaagacttgtccagtgtggcttcaactgggaatgaagcaggacaaa
gccaagaatatactgagcaaggagtttcctgggatctttttagtcaggagggatgcaagt
caaaaaacgatgatacttgctgtacggctttccgaccagttgggggagccccatgtcaaa
gaactgcctataaaggaagaaaagtccttgctataccttgaagggtctgtgctggtgttt
gagaacatttttaaactcattgctttctactgtgttagccgggacatccttccttttcct
ctgaagttacctcaggtcattcaaaaggtagctaaatatgaggacatggaggtgatctct
tctctaggatcagagttctggaactcagctctgaatagtcatgaggaaatggaaagcatt
gctggtagctgtggtgctctggacaggcaggggcaaagcagctcctgtgaaatccagatt
tccatcggcagtgaccggctgtggtacgtcaacccaattttcattgaggaatgcagcaac
agcttgccaaccacctcttctgcccctgttttgaggacccagagtcttaacacaccagtc
caggttcctcccaaatacaaacggccaccacccgtacgtcctcgtccacccagtgcacct
gattgttctcaaaactgcgcattagccaagccttcaaaaggggagttcaagacagttctc
agttctcctcccccttcagtccagaaaggggaaggaagtgactgtgagcgtgcagacaga
gagcaagagagacagggaactcctgcctcaagcactgagcgtggaaagccagctgtctta
cagccagctcagggcaaagaaggaaaacagctttcaaatacagcttcacatcgagttcct
ccaataccaatccgacggaggctatctgaaaagcaaccttcagaggaagcaacgcagcag
gaagtccacaccagcacctccacagaagcagaggacaatattcttcaagtcccggtagca
tccctcatttgccttgatgacagtatggaagaaagggacaagcctatggatccagagcct
cagcaactacaagaagtgccagtggaagaatctaaggtaacaaatggagctccaacagtg
gtagcacctcaaccaaagaagcctaatgctccagtggcacctcccaggaagaaaagattg
tctcagaatctgaccggacaagtctcaaacagcactgtaaactcacttacgccaattcct
caagagtccactgttcctttaaattcaagcagccccagtcaaatccgccactcgctctgc
atcagtgctggtcatcccaaagtctcggatgtttctctatactctcctgagggtggagct
ccaccagaccatgactcctactcaaccagcagcacggaggaggaggcagatgccattgca
gcaacaggtactgccatcaagaggaccccaacaatcatgttagaccgtgcaaagcaacga
ctgtcaatggtgtctatggcaaacctctccaatgtgctcacgggctttatgaacgcagac
cgtaaattgcagaagcgcatcgtagaaatgtccagggatggaaacacatacttcgggaac
cttgttaaggattatcgagctttcactttggacaccatgcgaaaacacacctccagcaca
gagatgctccaagagatcaggcagatgataacccaactaaaaagctatctgatccagagc
gcagagctgcaaaatctacaggaagcagctggatactctgaggaaaaactggagatcatt
attgaagcagcactatgcaaaagtgtcctgaagcccatacgagaggctgtttataacgga
ctgaaggatatccactcccgttcaggaaatttgaagaagctaaaagaaaaccagcaagtg
gttcaggggacgaccaccacagacctaggggtcaccaccagtgttcccgaaatgaccgtt
atggagaaaattcaaacaaagctcggcaacctgcaccaagagtattcacctcagaagaag
atcgacctgctcctcaagacctgcaaaatcatctatgaatccatgtctgtgggctgtcca
ggaaaggctcacggggctgatgatttcctgcccgtgctgatgtacgtcttggctcgctgt
aacatcagcgctctgctgctggatgtggagtacatgatggagctaatggatccggcactg
cagctcggagagggttcgtattatctcaccaccacttatggagctctggagcacatcaaa
aattttgataaacaagctgtgaccagacagctgagtttggagatccaagactccatccat
cgttgggagcgccgccgcaccctaaacaaagcaagagcatcacgctcctctgtacaggac
ttcattaacgtgtccttcctggaggctggatccaacaccaagaccctgggattgcgtccc
aacactaccgctcaggacctgtgcaatcaatgtgcggagaagtttgatgtgttggattct
gagtcctattgcctaagcgtgctagtggatggtcattacaagcctttggcccccgaggag
tttcctctcaccatcaaatccaccttgcaccacagcgagccacgtaaggaatattatttc
gtctaccgccacggtcgctggccagaacaagagtctgtagatgagacgccatctacagca
acacctgaagagagtttgatatga
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