Labeo rohita (rohu): 127179915
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Entry
127179915 CDS
T09007
Symbol
snap23.1
Name
(RefSeq) synaptosome associated protein 23.1 isoform X1
KO
K08508
synaptosomal-associated protein 23
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127179915 (snap23.1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127179915 (snap23.1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127179915 (snap23.1)
Membrane trafficking [BR:
lroh04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
127179915 (snap23.1)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127179915 (snap23.1)
Exosomal proteins of other body fluids (saliva and urine)
127179915 (snap23.1)
Exosomal proteins of colorectal cancer cells
127179915 (snap23.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
V-SNARE_C
Use1
DUF4192
COG6_N
GlutR_dimer
Motif
Other DBs
NCBI-GeneID:
127179915
NCBI-ProteinID:
XP_050989696
LinkDB
All DBs
Position
17:22007669..22016030
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AA seq
237 aa
AA seq
DB search
MSKQPQSVELKATGGAANLDTSKMADMTVEDITLRANQVTDESLESTRRMLQMAEESRET
GVKTMTMLDEQGEQLRRVEQGMDQINQDMRQAEKNLTDLSKCCGLCVCPCDRVTSIEHDG
RYKKTWGTGGDSSSMEGKEGGVVSSQPSAVRNGQAVSSGSAGGSGPYIKRVTNDAREDEM
EENLDHVGSIIGNLKNLALDMGNEIDKQNKTIDRITDKADMNKARIDEANQRANKLL
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaacaaccccagagcgtagagcttaaagccacaggaggggcggcaaacttggac
accagcaagatggcagatatgacagtggaggacatcacactgagagccaaccaagttaca
gatgagtcacttgaaagcactaggcggatgctacaaatggcagaggagagccgggagaca
ggggtcaaaacaatgaccatgctggatgaacagggagagcaactgaggcgagtcgaacaa
ggaatggaccagatcaatcaggacatgaggcaggccgagaagaacttgactgatctgtcc
aaatgctgtggcctgtgtgtgtgcccatgtgacagagtgacttctattgagcatgatggg
agatataagaagacttggggcacaggtggtgacagctccagtatggagggaaaagagggt
ggtgttgtatccagccaacccagtgctgttcgtaacggacaggctgtttcgagtgggtca
gcaggtggatctggaccctacatcaagagagtaacgaatgatgcacgagaagatgagatg
gaggaaaatctggaccacgtgggcagcatcattggaaatctgaagaatttggccttggat
atgggcaatgagattgacaaacagaacaagaccattgaccgcatcactgataaggctgat
atgaataaagctcgcattgatgaagccaaccagcgagccaacaaacttctgtag
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