Labeo rohita (rohu): 127179917
Help
Entry
127179917 CDS
T09007
Name
(RefSeq) synaptosomal-associated protein 23-like
KO
K08508
synaptosomal-associated protein 23
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
127179917
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127179917
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127179917
Membrane trafficking [BR:
lroh04131
]
SNARE
SNAP-25 (Qb,c)
SNAP-23
127179917
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127179917
Exosomal proteins of other body fluids (saliva and urine)
127179917
Exosomal proteins of colorectal cancer cells
127179917
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNAP-25
DUF5089
Laminin_II
OEP
COG6_N
Snapin_Pallidin
FlaC_arch
Sec20
Motif
Other DBs
NCBI-GeneID:
127179917
NCBI-ProteinID:
XP_050989700
LinkDB
All DBs
Position
17:22021184..22026614
Genome browser
AA seq
204 aa
AA seq
DB search
MADMSVEEMTIKANHITDESLESTRRMAQMTQESLDVGAKTLIMLDEQGEKLRKVDQEVE
LIKQDMKQARKNLNELSKCCGLCLFPFNRLKSTKRKKQVREPKDSKQNVVSSQLTAVRNG
QTVSAGSVAPTGPYFKRIINDDREDEMEENLDEVSNHLTTLKSMALDFHDKIEKQNQKIG
DIADKVSAVTTEVAATEKQARKHQ
NT seq
615 nt
NT seq
+upstream
nt +downstream
nt
atggcagacatgtcagtggaggagatgacaatcaaagccaaccatataacagatgagtcg
cttgaaagcactagacgaatggcacaaatgacacaggagagtttggacgttggggccaaa
actttgattatgctagatgagcagggagaaaaactaagaaaagtggatcaggaagtggag
ctgatcaagcaggacatgaaacaggcccgaaaaaatctgaatgaactgtcgaaatgctgc
ggcctgtgtttgttcccatttaacagactgaagtctaccaagagaaaaaaacaggtcagg
gaaccaaaggacagcaagcagaatgtggtatccagccaactgactgccgttcgcaatggg
cagactgtttctgctgggtcagtggcccccactggcccttactttaagagaataataaat
gatgatcgagaagatgagatggaagagaatctggatgaggtgagcaaccaccttacgact
ttaaagagcatggcactggacttccatgacaagattgaaaaacaaaaccaaaaaattggc
gacatcgctgataaggtttcagcagtcacaactgaagttgctgctacggaaaaacaagcc
agaaaacatcaataa
DBGET
integrated database retrieval system
