Labeo rohita (rohu): 127179969
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Entry
127179969 CDS
T09007
Symbol
psmc1a
Name
(RefSeq) proteasome 26S subunit, ATPase 1a
KO
K03062
26S proteasome regulatory subunit T2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
127179969 (psmc1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
lroh03051
]
127179969 (psmc1a)
Proteasome [BR:
lroh03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
127179969 (psmc1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_22
AAA_2
DUF815
nSTAND3
AAA_16
AAA_5
RuvB_N
AAA_3
AAA_28
AAA_25
AAA_14
ATPase
RNA_helicase
NPHP3_N
TIP49
NB-ARC
AAA_33
IstB_IS21
NACHT
Prot_ATP_ID_OB_N
Mg_chelatase
ABC_tran
AAA_24
Parvo_NS1
SLFN-g3_helicase
Zeta_toxin
AAA_7
TsaE
Motif
Other DBs
NCBI-GeneID:
127179969
NCBI-ProteinID:
XP_050989786
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All DBs
Position
17:5630053..5635538
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AA seq
440 aa
AA seq
DB search
MGQSQSGGQGPGGGKKDDKDKKKKYEPPIPTRVGKKKKKVKGPDAASKLPLVTPHTQCRL
KLLKQERIKDYLLMEEEFIRNQEQMKPLEEKQEEERSKVDDLRGTPMSVGTLEEIIDDNH
AIVSTSVGSEHYVSILSFVDKDLLEPGCSVLLNHKVHAVIGVLMDDTDPLVTVMKVEKAP
QETYADIGGLDSQIQEIKESVELPLTHPEYYEEMGIKPPKGVILYGAPGTGKTLLAKAVA
NQTSATFLRVVGSELIQKYLGDGPKLVRELFRVAEEHAPSIVFIDEIDAIGTKRYDSNSG
GEREIQRTMLELLNQLDGFDSRGDVKVIMATNRIETLDPALIRPGRIDRKIEFPLPDEKT
KRRIFQIHTSRMTVADDVTLDDLILAKDDLSGADIKAICTEAGLMALRERRMKVTNEDFK
KSKENVLYKKQEGTPEGLYL
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgggtcaaagtcagagtggaggacaaggaccaggtggtgggaagaaagatgacaaggat
aagaaaaagaaatatgagcctcccattcccacaagagttgggaaaaagaagaagaaagtg
aagggaccagatgctgctagcaagctccctctggtcactccacacacacagtgcagactg
aaactcctcaaacaagagagaattaaagattatctgctgatggaggaggagttcatcagg
aaccaggagcagatgaaacccctggaggagaaacaggaagaggagagatctaaagtggat
gatcttagagggacgcccatgtctgtgggaactctggaagagatcatcgacgataatcac
gccattgtgtcgacatcagtgggctctgaacattacgtcagtattctgtcgtttgtagat
aaagaccttcttgagcccggctgctcagtgttgctgaaccacaaggttcatgcagtaatt
ggagtgctgatggatgacacagaccctctggtgactgtaatgaaagtagaaaaagcccca
caggagacatatgcagacatcggaggtctggacagccagattcaagagatcaaggagtct
gtggagcttcccctcacacatccagagtattatgaagagatgggaataaagccgcctaaa
ggggtcattctgtatggtgcaccgggaacaggcaagactcttctggcaaaggcggttgcg
aaccagacatctgccaccttcttgagggtggtgggctcagagcttattcagaaatacctg
ggcgatggtcccaaactggtgcgagagctcttcagagtggctgaggaacacgctccgtcc
attgtcttcatagacgagattgacgctattggcacaaagaggtatgactctaattcagga
ggcgagcgtgagatccagagaacaatgttggagctgttaaaccagttggatggatttgac
tcccgcggagatgttaaagtcatcatggctactaataggatagagacacttgacccagct
ctcattagaccaggtagaatcgatcgtaagattgagttccctctgccggatgagaagacc
aagcgcagaatctttcagatccacactagcaggatgacggtagcggatgacgtgactttg
gatgacctcatcctggctaaagatgacctctccggtgctgacatcaaggccatttgcaca
gaggcagggctgatggctctgagggaacggcgaatgaaagttactaatgaagacttcaag
aagtccaaagagaacgtcctgtacaagaagcaggaggggacaccggagggactctacctt
taa
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