Labeo rohita (rohu): 127179977
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Entry
127179977 CDS
T09007
Symbol
vav3b
Name
(RefSeq) guanine nucleotide exchange factor VAV3b isoform X1
KO
K05730
guanine nucleotide exchange factor VAV
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04510
Focal adhesion
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127179977 (vav3b)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127179977 (vav3b)
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
CAMSAP_CH
SH3_2
CH
SH3_1
SH2
SH3_9
SOS1_NGEF_PH
PH
C1_1
RHG20_PH
CDC24
LZ3wCH
SH2_1
Filamin
Dip
Prok-RING_1
Motif
Other DBs
NCBI-GeneID:
127179977
NCBI-ProteinID:
XP_050989810
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Position
2:13383437..13451068
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AA seq
853 aa
AA seq
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MEYWRQCSLWLINCKVLPRNHRVTADSAQVFDLAQTLRDGVLLCQLLNNLKPDTINLKEI
NLRPQMSQFLCLKNIRTFLSACCEAFGMKKSELFEAFDLFDVRDFGKVIDTLSKLSHTPF
AQQKGIRSFPTEESTENEDIYIHLADLIDEELEEDIYDPVYGDVEGGEVYEDLMRTEAAA
SQAKQAEVDIRSCCLLEIKQTEAKYTETLETIEKYFMIPLIKFISAIDIDKIFSNIPDLV
KVHKGLLAEIQDSVQNKNAENLHQIFITYKDRLLLYGKYCSHVESAISLLDFICKEKEGV
RLKLEECSKRANNGKFTLRDLLVVPMQRVLKYPLLLQELVKYTSDKEKSNLRLALDAMRD
LAQYVNEVKRDVETLREIDQYQRSIENLNQCLLSYGRPKGDGEVRLVSNMDKRRQDRHIF
LFDVAVIVCKRRGDNYEMKEVIDLNNFKITNNPTTDKDCKKWCYGFYLTHQQGQTGFEFL
FKTKELKKKWLDQFEMAISNIRPENATFNSHHFRMHTFERATTCSSCHMLLRGIFNQGYL
CPKCGNGAHKGCLGKLGVCGRAGAAVQKAQRKTTPRKQEDSGLPKMLVIRDYFGVPSPPG
GPPLNAQTGDVIEVICADPHRSWWQGKILTTQETGFFPSDAVRPCPCVPRTVDYSAQPWF
AGPMERHHAESELMERENSTYLVRYRSRESREYALSIKYNNDVKHIKILTKEGCFYIAES
RTFKTVLELVEYYRQHSLKEGFRTLDTNLQVPYKELGSGLRPPAPVLCGLSILSPTSYSF
VPPSPSPFWSVLAPRVLGIALARCDFSSRDTRELSLQVGDLVKIYIKCTNGWWKGEVNGQ
VGWFPSTYVEEEE
NT seq
2562 nt
NT seq
+upstream
nt +downstream
nt
atggagtactggaggcagtgcagcttgtggctgatcaattgcaaagttttgcctcggaat
catcgggtcacagcggattcggcgcaggtttttgatttggcccaaactcttcgggatggg
gtgcttctgtgccagctgctgaacaatctcaaacccgacaccattaacctgaaagagatt
aatctcagaccacagatgtcacagttcctctgcctgaagaatattcgtacgttcttgtct
gcatgctgtgaagcatttgggatgaagaaaagtgaattgtttgaagccttcgatctcttc
gatgtccgtgattttggaaaggtcattgacaccctgtcaaaactctctcatacgcctttt
gcacaacagaaaggcatcaggtcatttcccacagaggaaagcactgaaaatgaagacata
tatatccatttggcagatcttattgacgaggagctggaggaagatatttatgaccccgta
tacggagatgtagagggaggagaggtgtatgaggatctgatgaggacagaagctgctgcg
tctcaagcgaaacaggccgaggtggacatcagaagctgctgtcttttagagatcaaacag
acagaagccaaatacactgagaccctggagacaatagagaagtactttatgattccgctg
ataaaattcatctcggcaatagacattgacaagattttcagcaatataccagacctggtt
aaagttcacaaaggcctgttggctgagattcaagactctgttcaaaataaaaatgcagaa
aacctccaccaaatcttcattacttacaaagacaggcttctgctctatggaaaatactgc
agtcatgtagaatcagccatttctttgttagacttcatctgtaaggaaaaagagggtgtt
cggctgaaactagaggaatgttcgaagagagccaacaatgggaaattcactttgagagac
ttacttgtggttcccatgcagcgagtactgaaatacccattactgcttcaggaattggtg
aaatatactagtgacaaagaaaagagcaacctacgattagcccttgatgccatgagagac
ctagcccagtatgtaaatgaggtgaaaagagatgttgagactctgagggagattgatcag
tatcagagatccattgagaatttgaaccagtgcttactttcttatggaagaccgaagggt
gacggtgaagtccgtttggtgtcaaatatggacaagcgcagacaggacagacatattttt
ttgttcgacgtcgctgtaatcgtctgcaagaggcggggggacaactatgagatgaaggaa
gtaatcgacctcaacaatttcaagatcaccaataaccccactactgataaggactgcaaa
aagtggtgctatgggttctaccttactcaccagcaggggcagactggatttgagttctta
ttcaagacaaaagagctgaagaagaaatggctggaccagtttgagatggccatatctaat
attcggcctgagaatgccacatttaactctcaccacttcaggatgcacactttcgagagg
gccaccacctgcagctcctgtcatatgcttctcaggggaatatttaaccaaggctacctt
tgtcctaaatgtggaaatggggctcataagggctgtctgggaaaactaggagtctgtgga
agggcaggtgctgctgttcaaaaagcacagagaaagacaacacctaggaaacaagaagac
tcaggtttgccaaaaatgctggtcatcagagactattttggggttcccagtcctccgggc
ggaccgcctctgaatgctcagactggtgatgtcatagaggtcatctgtgccgatcctcac
agatcctggtggcagggcaaaatcctgacaacgcaagagactggcttctttccaagtgat
gcagtcaggccctgcccatgtgtaccaaggacagttgactattcagctcaaccttggttc
gccgggcccatggagaggcaccacgcagagtctgagctcatggagagagagaacagcacc
tacctggtgcgatacaggagccgggagagcagagagtatgctctcagcatcaagtacaac
aacgatgtgaagcacattaagatcctcactaaggagggctgcttctacatagctgaaagc
aggacattcaagactgtattagaactggttgagtattacagacagcactctttgaaagag
ggtttccgtactctggacactaatctgcaggtgccctataaggagcttggtagtggactc
agacctcctgctccagtgctgtgtgggctttccattttgagtcccaccagctacagtttt
gttcctccctccccctcacccttctggtcagttttggccccacgagtgcttggcattgca
ctggcacgatgtgatttcagctccagagatacacgggaactctctctgcaggtgggtgac
ctggtgaagatctatatcaagtgtaccaacggatggtggaaaggtgaagtcaatggccag
gtgggatggttcccctcaacttacgtggaggaagaggaatga
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