Labeo rohita (rohu): 127179978
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Entry
127179978 CDS
T09007
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03272
Virion - Hepatitis viruses
lroh04382
Cornified envelope formation
lroh04514
Cell adhesion molecules
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
127179978
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127179978
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127179978
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
127179978
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
lroh03037
]
127179978
04147 Exosome [BR:
lroh04147
]
127179978
04515 Cell adhesion molecules [BR:
lroh04515
]
127179978
Cilium and associated proteins [BR:
lroh03037
]
Other cilia and associated proteins
Stereociliary proteins
127179978
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
127179978
Exosomal proteins of colorectal cancer cells
127179978
Cell adhesion molecules [BR:
lroh04515
]
Immunoglobulin superfamily
L1 family
127179978
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
TMEM_230_134
tRNA_NucTran2_2
Motif
Other DBs
NCBI-GeneID:
127179978
NCBI-ProteinID:
XP_050989806
LinkDB
All DBs
Position
17:complement(31338649..31348222)
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AA seq
243 aa
AA seq
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MASTGTQIFAFVLALLGILGATVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTG
MFSCTLKYSVLALPAYLQTARTTMVLSCVLAALGLCLASLGLKCTRWGGGRRAKRHAAMA
AGTCFLASGFLCLVPASWYTNEVIVSFLDANVPESNKFEPGGAVYVAFISSGFLFVGGSI
FCLSCSGKRHGPQDLILLPPDKLLLQQQQQLLQQQQQQDQLQHQYCSLSPLDNKTGYSLQ
DYV
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacgggcacgcagatctttgccttcgtgctggcattgctaggcatcctaggt
gccacggtggccacattactgcctaactggaaggtgagcgcggatgtcggttcgaacatc
atcactgccatctcgcagatgcaggggctgtggatggactgcacctggtacagcacaggc
atgttcagctgcacgctaaaatactctgtgctggcactgcccgcgtacctgcagacggca
cgcaccaccatggtgctttcctgcgtgttggcagcactgggattgtgtttggcctctttg
ggtttaaagtgcactcgctggggtggtggacggcgtgctaaacgtcacgctgccatggca
gccggcacctgctttctggcctctggctttctctgccttgttcctgcctcctggtacaca
aacgaggttatcgtcagtttcctagacgccaatgtgcccgaaagcaacaagtttgagccg
ggcggtgctgtctacgtagccttcatctcgtctggtttccttttcgtgggtggatccatt
ttctgtctttcctgctctggtaagcgacatggcccccaggatttgatacttctccctccc
gacaaactcctcttgcagcagcaacagcaactgctgcaacaacagcagcaacaggaccag
ctccagcaccagtactgttctctgtcaccactggacaacaaaactggctacagcctgcag
gactacgtatag
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integrated database retrieval system