KEGG   Labeo rohita (rohu): 127179978
Entry
127179978         CDS       T09007                                 
Name
(RefSeq) claudin-20
  KO
K06087  claudin
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03272  Virion - Hepatitis viruses
lroh04382  Cornified envelope formation
lroh04514  Cell adhesion molecules
lroh04530  Tight junction
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03272 Virion - Hepatitis viruses
    127179978
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127179978
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    127179978
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    127179978
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lroh03037]
    127179978
   04147 Exosome [BR:lroh04147]
    127179978
   04515 Cell adhesion molecules [BR:lroh04515]
    127179978
Cilium and associated proteins [BR:lroh03037]
 Other cilia and associated proteins
  Stereociliary proteins
   127179978
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of ovarian cancer cells
   127179978
  Exosomal proteins of colorectal cancer cells
   127179978
Cell adhesion molecules [BR:lroh04515]
 Immunoglobulin superfamily
  L1 family
   127179978
SSDB
Motif
Pfam: PMP22_Claudin Claudin_2 Clc-like TMEM_230_134 tRNA_NucTran2_2
Other DBs
NCBI-GeneID: 127179978
NCBI-ProteinID: XP_050989806
LinkDB
Position
17:complement(31338649..31348222)
AA seq 243 aa
MASTGTQIFAFVLALLGILGATVATLLPNWKVSADVGSNIITAISQMQGLWMDCTWYSTG
MFSCTLKYSVLALPAYLQTARTTMVLSCVLAALGLCLASLGLKCTRWGGGRRAKRHAAMA
AGTCFLASGFLCLVPASWYTNEVIVSFLDANVPESNKFEPGGAVYVAFISSGFLFVGGSI
FCLSCSGKRHGPQDLILLPPDKLLLQQQQQLLQQQQQQDQLQHQYCSLSPLDNKTGYSLQ
DYV
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcgtccacgggcacgcagatctttgccttcgtgctggcattgctaggcatcctaggt
gccacggtggccacattactgcctaactggaaggtgagcgcggatgtcggttcgaacatc
atcactgccatctcgcagatgcaggggctgtggatggactgcacctggtacagcacaggc
atgttcagctgcacgctaaaatactctgtgctggcactgcccgcgtacctgcagacggca
cgcaccaccatggtgctttcctgcgtgttggcagcactgggattgtgtttggcctctttg
ggtttaaagtgcactcgctggggtggtggacggcgtgctaaacgtcacgctgccatggca
gccggcacctgctttctggcctctggctttctctgccttgttcctgcctcctggtacaca
aacgaggttatcgtcagtttcctagacgccaatgtgcccgaaagcaacaagtttgagccg
ggcggtgctgtctacgtagccttcatctcgtctggtttccttttcgtgggtggatccatt
ttctgtctttcctgctctggtaagcgacatggcccccaggatttgatacttctccctccc
gacaaactcctcttgcagcagcaacagcaactgctgcaacaacagcagcaacaggaccag
ctccagcaccagtactgttctctgtcaccactggacaacaaaactggctacagcctgcag
gactacgtatag

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