Labeo rohita (rohu): 127179986
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Entry
127179986 CDS
T09007
Symbol
scfd1
Name
(RefSeq) sec1 family domain-containing protein 1
KO
K19998
sec1 family domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127179986 (scfd1)
Membrane trafficking [BR:
lroh04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
127179986 (scfd1)
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
127179986 (scfd1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec1
DUF3882
PS_pyruv_trans
Motif
Other DBs
NCBI-GeneID:
127179986
NCBI-ProteinID:
XP_050989819
LinkDB
All DBs
Position
17:complement(18809361..18828032)
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AA seq
632 aa
AA seq
DB search
MAASVREKQTAALKRMLNFNAPPLKNTAAEPVWKVLIYDRFGQDIISPLLSVKELRDMGI
TLHLLLHSDRDPIPDVPAIYFVMPTEENIDRICQDLRNQLYESYYLNFISAISRSKLEDI
ASAALAANAVNQVTKVFDQYLNFITLEDDMFILCNQNKEHISYHAINKPDIMDTDMEGIM
DTIVDSLFCFFVTLGAVPIIRCPRGNAAEMVAVKLDKKLRENLRDARNSLFTGDTMGTGQ
FSFQRPLFVLADRNLDLATPLHHTWTYQALIHDVLDFHLNRVSVEESQGSEASPAGARPK
KKNKKSYDLTAADKFWQKHKGSPFPEVAEAVQEELDTYRAQEDEVKRLKSIMGLEGEDDG
AISMLSDNTAKLTSAVSSLPELLEKKRLIDLHTNVATAVLDHIKSRKLDVYFEYEEKLMS
KSTLDKSLLDIISDPDAGTAEDKMRLFLIYYITSQQPPSEADLEQYKKALVDAGCDLSPL
NYIKQWKAFTKMAATPANYGSSGVKPMGLFSRVMNTGSQFVMEGVKNLVLKQHNLPVTRI
LDNLMEMKSNPETDDYRYFDPKMLRGSESSIPRNKNPFQEAIVFVVGGGNYIEYQNLVDY
TKARQGKRILYGCSELFNAGQFMKQLSQLGQK
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atggcggcctccgtccgggaaaagcagacagctgctctgaagcgaatgctcaacttcaat
gccccacctttgaaaaacacagcagctgagccggtatggaaggttcttatttacgatcgc
tttggccaagacattatatctccccttctgtctgtgaaagagttacgggacatgggcatc
actctgcacctcttgctgcactcagatcgcgaccccattccagatgttcccgccatttac
tttgtaatgcccacagaggagaacattgacaggatatgtcaagatctcagaaaccaactg
tatgagtcctactatttgaacttcatctccgcaatttccagaagcaagttggaggacata
gcaagtgctgctctagcagctaatgctgtaaaccaggtgaccaaagtttttgatcaatat
ttgaacttcatcacacttgaagatgatatgttcattctctgcaatcaaaacaaagaacac
atctcctaccatgcaatcaataaaccagatatcatggacacagacatggagggtataatg
gatacaatagtggatagtctcttctgcttttttgtcactctgggtgctgtcccaataatc
cgatgtccaagagggaatgctgccgaaatggtagccgtgaaacttgacaagaaactgaga
gagaatctgcgagacgctcgtaacagcctgttcaccggagacaccatgggcactggccag
ttcagttttcagaggccactgtttgttcttgccgatcgtaacctggatctagcgactcct
cttcaccacacatggacgtatcaggctctcattcatgatgtgctggacttccacctgaac
cgggtcagtgtggaggagtctcaagggtcagaggccagcccagctggagcacgacccaaa
aagaaaaacaagaagagctatgatctcactgctgctgacaaattttggcaaaaacacaaa
ggaagtccatttcctgaggttgcagaagccgtgcaagaggagctagatacatatcgggcc
caagaggatgaggttaaacgcctcaagagtatcatgggcttggaaggggaggatgacgga
gccattagtatgttgtcagataacactgccaaacttacctcagccgtcagttctcttcct
gaactcctggaaaagaagagactgattgaccttcacaccaacgttgccacagcagttctg
gaccacatcaagagccgtaagcttgatgtgtacttcgagtatgaggagaaactcatgagc
aagtccacacttgataaatccctgctggacattatcagtgatcctgatgctggaacagca
gaagataagatgaggctgtttctgatctactacatcacttcccagcagcccccatctgag
gctgatctagaacagtacaagaaagctttggttgatgcaggctgcgacttatccccactt
aactacattaagcagtggaaagctttcaccaagatggctgcaacgccagccaattacggg
agcagtggagtgaaaccaatgggactattttcaagggtgatgaacactggctcccaattt
gtgatggagggggtaaaaaatctggtcctgaagcagcataacttgccggttactcgtatc
ttagacaacttgatggaaatgaagtcaaacccggagacggatgactacagatactttgat
cccaagatgcttcgcggaagtgaaagctccattccaaggaacaagaacccctttcaagag
gccatcgtctttgtcgttggtggtggcaattacatagagtatcaaaatcttgttgactac
acaaaggccaggcaagggaagcggattctttatggctgtagtgagcttttcaatgcaggc
cagttcatgaaacagctctcccagcttggtcagaaatag
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