Labeo rohita (rohu): 127180090
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Entry
127180090 CDS
T09007
Symbol
cdan1
Name
(RefSeq) codanin-1
KO
K19531
codanin-1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127180090 (cdan1)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
127180090 (cdan1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Codanin-1_C
VGCC_beta4Aa_N
Motif
Other DBs
NCBI-GeneID:
127180090
NCBI-ProteinID:
XP_050989978
LinkDB
All DBs
Position
17:25178555..25199159
Genome browser
AA seq
1292 aa
AA seq
DB search
MAAILESLLLSKAELSEAVLWLKGQHVCESQNFPFKFSKEEFVPFLLNFLRDQSSQTLTH
GPTTPAKTPSTSRSVRTQDSSDRRGNKSTPVQGPRSASRVQLFSPSPSQLGGRSEQETPF
TGSQCLSGVSAFSSPSFSSVSSPAPRNTPSERRSAQRASLGDFMTSPPETQPSPSAQQHR
GRRRSGGFGGCASGRQTGTRGAASEDGGRWDGGGRKSRGVGRIEPVSPPTQVQLNFNNLE
DFPPVGASQSSPVATKPSRRINPTPVSAERPNSKPKSCFTSTPLSLPASPPTIPENTGAA
GSPLSLQEERELLRRERSKLAQQTSSPLKPTPICTPTKSTVHRQGSKVTPDPQSPCPDPN
KVTQKSELNLLAELYCTCISENLVPCVFLELFFVLQLLTSRGVSAEEGISVCEDSPDVLE
KAYLGNVHNCVYFSVRVLENQFELVSHLDKCTLRLLSENERVGTFSSSLRDRLAQAQDNC
TAKVIPSPPLFVHSVPFQPATDNRSNFSSDRAFHTFKKQRDVFYGLLREWEDSHKEPGWE
FEAALGSRVRMMVSQLTAAGSHSHFARLFQKQLIQMCKGPCVLGSSSDAPDADLLGMLGA
DSLGRLKRLQQRLVQPQGLIGPCPPPSFPGHQDFFKCFLQTASCCQLNQHLKDGLCQQLL
KLDEVSIFGPDASPARGEETGDGDMEQQDEKQRFSSVLLTARLLAKFLGFVSFLPYQTSE
LPSRDIQDAAITLRSKSSPVLDVCAVLRSSVLRRRTILTVPWMVEFLSMLDYVGPFLPCY
RTALCLLLQIYKRMVLGRGGELCYMNQLLMVAVLGWLFQIPIFPEDLFFSTDVKEEVKEL
ENIISSQGLDTLSLVDQQLLYTCCPYLGEFRKLLAAFVAGSTSKSGGLIRKITPTSAEPR
GPSTTRSQQKLQVDLEQAFFHNQPPSLRRTVEFVAERVGSNCVKHIKATLVLELVKGGEK
TLRDSLGLEGVNTAKLNDSICAQLCDAGMQTLEKATRFCSENAPGAVRVLLPLETSPSVL
TTAESITTRLAIEKACSWLSSNITTLLKREWKSAFERVMKSVPLSVTLDTEEGEGSGRSQ
QVQRSTSGLSAGSACVSDCTHKVPLGSEVMIEIKEVLSVAVGPRSDEEVFTVHQIECLLD
RVGQTLGCRKLLSPVVEQMLLRCTVQLACKIVSGELPLVSSDEGNRRPALLEMFLALWAW
TPSPPLHLLLSEPTLTAILSATDSERTDYLFLIRQLIERGLLGEEEVRTNWPKLSVLSWP
EESVEKFQQLSLATQFPLPSLPNHRDTLQVSQ
NT seq
3879 nt
NT seq
+upstream
nt +downstream
nt
atggcggctattttggaatcattactactcagtaaagcggagttaagcgaggccgtgctc
tggctcaaaggacaacacgtttgtgaatcccaaaactttccatttaagttcagcaaagaa
gagtttgtgcctttcctattgaatttcttgcgggatcagagcagtcagactttgacccat
ggccccaccacacctgccaagacccccagcacctccagatctgtcaggactcaggactct
tctgatcgtagaggcaacaaatccacaccagttcagggtccacgcagtgccagtcgagtc
cagctcttctctccttccccgtcccagttgggcgggaggagtgaacaggagaccccattt
acaggctcacaatgtttgagtggcgtcagtgccttcagtagcccttccttcagctctgtt
tcgagccctgctccccgcaacaccccatctgagcgccgctccgcccagcgggccagtctt
ggcgacttcatgacgtcacccccagagacccagcccagcccctccgcacagcagcacaga
ggccgcaggaggagtggggggtttggggggtgtgcgtccggccgtcagacgggaacacgc
ggtgctgcgtcagaggatggaggtcgctgggatggaggtgggaggaagagcagaggtgtg
gggaggattgaaccagtgtcacctccaacacaggtgcagctcaacttcaataatttggaa
gacttccctccagtgggtgcctcccagtcatcaccagtagctaccaagccttcaaggaga
atcaacccaactcctgtaagtgcagagcggcctaactccaaacctaagagctgcttcacg
tccaccccgcttagcctgcctgcgagccctcctacaataccagagaatactggggctgct
ggcagtcctctcagtttgcaggaagagagggaattgcttaggagagaaaggtctaaactt
gcccagcagaccagctccccactgaaacccacacccatctgtaccccaaccaaaagcaca
gtgcatagacagggatcaaaagtgacccctgacccccagtcaccttgccctgaccctaac
aaagtgacacagaaatcagagcttaatctattagccgaactgtattgtacatgcatttca
gagaacctggttccgtgtgtcttcctggagctgttctttgtgctgcagctccttacatct
cgtggcgtgtctgcggaggaaggaatcagtgtctgtgaagacagcccagatgtgctggag
aaagcttacctgggaaatgtccacaactgtgtgtatttttctgtgagggtgttggagaat
cagttcgagttggtgtcacacctggacaaatgcacgctacggcttctgtctgagaatgag
agagtcgggactttctcttcttcactcagagatcgcctggcacaagctcaggacaactgt
acagctaaagtgatccccagtccacccttgttcgttcattcagtcccatttcagcccgct
acagacaaccgctctaattttagcagtgacagggccttccacacgtttaaaaagcagagg
gatgtgttttatggacttctcagagaatgggaggactctcataaggaacctggctgggag
tttgaggctgcattaggcagtagagtcagaatgatggtcagtcagctcacagcagcagga
agccattctcactttgctagactcttccagaaacagctgatccagatgtgcaaaggcccc
tgtgtgctgggctcctccagtgatgcccctgatgccgacctgctgggcatgctgggagca
gacagcctgggtcgcctgaagcgtctgcagcagcgtctggtccagcctcaagggctcatt
ggcccctgccctccaccatcctttcctggccatcaggacttcttcaagtgcttccttcaa
acagccagctgctgtcagctaaaccagcacctgaaagatggtctatgtcagcagctgctg
aagctagatgaggtttccatcttcggtccagatgccagccctgcccggggagaggagaca
ggtgatggagacatggagcagcaggatgagaagcagcgtttctcctctgtgcttcttacg
gctcgacttctggccaagtttttgggcttcgtctctttcctgccttaccagacctctgag
ctgccatcaagagacatacaggatgctgcaatcactctgcggagcaagagttctccagta
ctggatgtttgtgcggtgttgaggagttcagttcttcggagacgcaccattctgacagtg
ccctggatggtggagttcctgtccatgctcgattacgtggggccatttcttccttgttac
aggactgctctgtgccttctgctccaaatctacaagaggatggtactgggtcgaggaggg
gagctgtgttacatgaatcagctgctcatggtggcagttttgggttggctgttccagatc
cctatcttccctgaagatctcttcttcagcacagatgtaaaggaagaagttaaggaactg
gagaatattataagctctcaagggctggacaccctctcattagtggaccaacagcttctc
tacacttgctgtccatatttaggggagtttcgtaaacttcttgctgcttttgtggccggt
agtacatctaagagcggaggcttaattcgcaagatcacccccacatctgcagaaccgagg
ggaccgtctaccacccgttcacagcagaaacttcaggttgacctggaacaggccttcttt
cacaaccagcccccatctctcagacgcactgtagagtttgttgctgaaagagtcggttcc
aattgcgtcaaacacatcaaggctacgcttgtgttggagcttgtgaagggtggagagaaa
actctcagagatagtttgggtttggagggtgtcaacacagccaagctaaacgattctatc
tgtgctcagctgtgtgatgcaggcatgcagactctagagaaagcaaccaggttctgcagt
gagaatgctcctggagctgtcagagtacttcttcctctggagacctctccttctgtcctg
accactgctgagagcatcaccactcgtttggctatagaaaaggcttgcagctggctctcc
tccaacatcacaacactgctaaagagggagtggaagagtgcgtttgagagggtgatgaag
agtgtgcctttatccgtcactttggacactgaagagggcgagggatcgggcaggagtcaa
caggtccagaggagtacctcagggctcagtgctgggtctgcttgtgtttcagactgtacc
cataaagttccactgggatcagaagtcatgattgaaataaaggaggttctgagtgttgct
gtaggacccagatctgatgaggaggttttcactgttcatcagattgagtgtctgctggac
agagtgggacaaacacttggatgcagaaagctcctctctcccgtggttgagcagatgttg
ttgcgttgtactgttcagctggcctgcaaaattgtatccggggagctgccacttgtgtct
tcagacgagggcaacaggagacctgctcttctggaaatgtttctagctctgtgggcttgg
actccctctccacctctgcaccttctccttagtgaacccactttgactgccattcttagt
gccacagatagtgagagaactgactacctgttcctgataagacagctaatagagaggggt
ctcttaggagaagaggaagtgaggaccaactggccaaagctgtcagtgttatcttggcca
gaggagtctgtagagaagtttcagcagctttctctggccacccagttcccattgccttca
ctgccaaaccacagggacacactgcaggtctctcaataa
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