Labeo rohita (rohu): 127180117
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Entry
127180117 CDS
T09007
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3 isoform X1
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127180117
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127180117
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
FISNA
PRY
NOD2_WH
LRR_6
SPRY
LRR_4
Motif
Other DBs
NCBI-GeneID:
127180117
NCBI-ProteinID:
XP_050990023
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All DBs
Position
17:3263477..3287114
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AA seq
1175 aa
AA seq
DB search
MSLNDPSEEGVSVQKCKAASPEHSCVSMKSDTSMNPPPKLSDGVVTSDSDSSVCSMSLYE
WRKEGVPVQKHKAESPEPSCLSMKSDTSMNPPPKLSDGVVTSDPDSSACSMSLYERRKEG
VPVQKHKAESPEPSCLSMKSDTSMNPPPKLSDGVVTSDPDSSACSMSLYERRKEGVTVQK
HKVESPEASCVSMKRYRSMNDPPELSDGAVTSDPELKRFKDQHKTNMKNKYERLFEGIIQ
QGNQTLLNRIYTQLYIIEGESERVNEEHEVLQMEKRPRTQDIPIYCNDIFKPLHQPGCEE
KDKIKTVLTKGIAGIGKTVSVQKFILDWTEGKANQDVDFMFVLPFRELNLIKDQQYSLHR
LLLDFHPELHDLDLKIYEECKVVFIFDGLDESRITLMFSDRQKVCNVNKSSSVGVLMSNL
IRGELLPSALIWITSRPAAANQIPSEYINRVTEIQGFNEPQKEEYFRKRISCKHQADRII
SHIRRSRSLHIMCHIPVFCWISATVLQNLLKQNYSAEIPQTLTEMYIHFLLTQINMKKQK
YDEKRTEKPLKSSRDVIIKLAKLAYKQLMKGNVMFYEEDLIESGIDVTDAAVYSGICTEI
FKEESVIHQRKVYCFIHLSFQEFLAAFYEFYTYIVKKIKLQKSFQDNQYRLYSREFSLYE
PVETAVNNSVQSQNGHLDLFLRFLLGISQESSQRLLQDLLTHTVNSSEAIKKITQYIKDK
IKGNSGLSADRCINLFLCLLEMKDQTLYREIQMFVKSETRSVNRLSPGHCSTIAYMLQIS
EDVLDEFDLKKYNTSDEGRRRLIPAVVNCRKALFACCNLTGQCCRSLSSSLQSSNLLREL
DLSNNDLQDLGVKFLSDGLKSSHCQLNILRLTSCNLTDQCCESLSSCLQLSNSLRELDLS
NNDLQDSGVKLLCDGLKSSHCQLNILRLSGCMVTEEGCCFLASALSSNPSHLRELDLSYN
HPGQSLVKLLADPNYRLDKLNVDHGGEIRITTGPQKYACDLTLDLNTANTRLILSERNRK
ASYVREKQPYPDHPERFDECLQVLCRESLIGRSYWEAEGSGNVCMSVTYSGISRKEWRSD
CRFGYSEKSWSLNCSKDSFFVIHNNKRTDISAPSRRSNKVGVYLDWSAGTLSFYSVSDTH
TLTHLHTFNSTFTEPLYAGFGFDYGSSCVRLKIFL
NT seq
3528 nt
NT seq
+upstream
nt +downstream
nt
atgagtcttaatgatccaagcgaggagggggtttctgttcagaaatgtaaagcagcatct
ccagaacacagctgtgtgtctatgaagagtgacacatccatgaaccctccccctaaactt
agtgatggagtagtgacctctgactctgatagttctgtctgtagtatgagtctctatgag
tggagaaaggagggggttcctgttcagaaacataaagcagaatctccagaacccagctgt
ttgtctatgaagagtgacacatccatgaaccctccccctaaacttagtgatggagtagtg
acctctgaccctgatagttctgcctgtagtatgagtctctatgagcggagaaaggagggg
gttcctgttcagaaacataaagcagaatctccagaacccagctgtttgtctatgaagagt
gacacatccatgaaccctccccctaaacttagtgatggagtagtgacttctgaccctgat
agttctgcctgtagtatgagtctctatgagcggagaaaggagggggttactgttcagaaa
cataaagtagaatctccagaagccagctgtgtgtctatgaagagatacagatccatgaat
gaccctcctgaactcagtgatggagcagtgacctctgaccctgaattgaaaagattcaaa
gaccagcacaaaaccaacatgaagaacaagtatgaaagattatttgagggaatcatacaa
caagggaatcaaaccctcctgaacaggatctacacacaactctacatcatagagggagag
agtgaacgagtgaatgaagaacatgaggttttacagatggagaaaagacccagaacacaa
gacattccaatctactgcaatgacatctttaaacccttacatcaaccaggatgtgaagag
aaagacaaaatcaagactgttcttactaaaggcatcgctggaattggaaaaaccgtctct
gtgcagaagttcattctggattggactgagggaaaagccaatcaggatgtagatttcatg
tttgtgcttccatttcgagagctgaacttgattaaagatcagcagtacagtcttcacaga
ctcctgctggactttcaccctgaacttcatgatctggacttaaagatttacgaggagtgc
aaggttgtgtttatctttgatggtctggatgaaagcagaattacactgatgttttcagac
agacaaaaagtttgtaatgtgaataaatcttcatcagtgggtgtgttgatgtcaaacctc
atcagaggagagctgcttccctctgctctcatctggatcacctccagaccagcagcagcc
aatcagatcccctcagaatatatcaaccgtgtgacagaaattcagggatttaatgagccg
cagaaggaggaatatttcaggaagagaatcagttgcaagcatcaagctgacagaatcatc
tcacacattagaagatcaagaagtctccacatcatgtgtcacatccccgtcttctgctgg
atctcagccactgtgcttcaaaacctcctaaaacaaaattacagtgcagaaatccctcaa
actctgactgaaatgtacatccacttcctgctgactcagattaacatgaagaagcaaaag
tatgatgaaaaaagaacagagaaacccctgaagtccagcagagacgtgattataaaactt
gctaaactggcttacaaacagctgatgaagggcaatgtgatgttctatgaggaggacctg
attgagagcggcatagacgtcactgatgctgcagtgtattctgggatttgcactgagatc
tttaaggaggaatctgtgattcatcagaggaaagtctactgcttcattcatctgagcttt
caggagtttctagcagctttctatgagttttatacctacatagtcaagaagattaaatta
cagaagtcgtttcaggataatcagtatcgcttgtacagtcgggaattctctttgtatgag
ccagtagaaacagcagttaataactccgtacagagtcaaaatggacacctggatcttttc
ctgcggttcctgctgggcatctcacaggagtctagtcagagactcttacaggatctgctg
acacacacagtgaacagctcagaagccatcaagaaaatcacacagtacattaaggacaaa
atcaagggtaattcaggtctctcagctgacagatgcatcaatctgtttctctgtctgctg
gaaatgaaggatcagactctgtacagagagattcagatgtttgtgaaatcagagactcgc
tcagttaatcgactttctcctgggcactgctcaacaattgcctacatgctgcagatatct
gaggatgtgctggatgagtttgatcttaagaaatacaacacatcagatgagggtagaagg
agactgataccagctgtggtgaactgcagaaaagctctatttgcttgctgtaatctcact
ggtcagtgctgtagaagtttgtcttcatctctgcaatcatcaaacttactgagagagctg
gacctgagtaacaatgacctgcaggatttaggtgtgaagtttctgtctgatggactgaag
agttcacactgtcaactcaacatactgagattgaccagctgtaatctcactgatcagtgt
tgtgaaagtttgtcttcatgtctacaattatcaaactcactgagagagctggacctgagt
aataatgacctgcaggattcaggagttaagcttctgtgtgatggactaaagagttcacac
tgtcaactcaacatactgagattatctggctgtatggtgacagaggaaggctgttgtttt
ctggcttcagctctgagttcaaacccctcacacctgagagagctggatctgagctacaat
cacccaggacaatcgttagtcaagctgctcgctgatccaaactacagacttgacaaactc
aatgtggatcacggaggagagataaggattacaacaggaccacagaaatatgcatgtgac
ctcacactggatttaaacacagcaaacactcgtctcattctgtctgagaggaacagaaag
gcatcgtatgtgagggagaagcagccgtatcctgatcatccagagagatttgatgagtgt
cttcaggttctgtgtagagagagtctgattggacgtagttactgggaggctgaagggagt
gggaatgtttgtatgtcagtgacgtattcaggaatcagcaggaaagaatggaggagtgac
tgtaggtttggatacagtgaaaagtcctggagtctgaactgttctaaagacagtttcttt
gtcatacacaataataagcgcacagacatatctgccccttcacgtcgctctaacaaagta
ggagtgtatctggactggtcggccggcactctgtccttttacagtgtctctgacacacac
acactcacacacttacacacattcaacagcacatttactgaaccactctatgctggattt
ggatttgattatggttcctcatgtgtgagattaaaaatctttctgtaa
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