Labeo rohita (rohu): 127180120
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Entry
127180120 CDS
T09007
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 3-like
KO
K22614
NLR family CARD domain-containing protein 3
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127180120
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127180120
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NACHT
FISNA
NLRC4_HD2
PRY
LRR_6
NOD2_WH
SPRY
LRR_1
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
127180120
NCBI-ProteinID:
XP_050990034
LinkDB
All DBs
Position
17:3204026..3223462
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AA seq
1141 aa
AA seq
DB search
MTLYKKKEEDDVYTHKVASPEPSCVSMKSDASMGLGPNLCDGAVTFDPDTACKISLSEQR
KEFSAQKRKAASPSTVFKKKCRSMHHLPEVSGGAVTFNPKNDVIRSLMPRLTCTNSDCQT
LIMQRVKDQHKASMKNKYESLFEGIKEQENQTLLNRIYTQLYIIDGESGGVNEEHEVLQM
EKIPRAQHSLQHTQICCNDIFKSLHQAEPEEQRKQKKDKIKTVLTKGIAGIGKTVSVQKF
ILDWSEGKANQDVDFMFVLPFRELNLIKDHQYSLHRLLLDFHPELQDLESKIYEECKVVF
IFDGLDESRITLFSYYEKVCDMTESSSVGVLMSNLIRGELLPSALIWITSRPAAANQIPS
QYIKRVTEIQGFSETQKEEYFRKKISDKHQASRIISHIRRSRSLHIMCHIPVFCWISATV
LENLLKQDDSPEIPQTLTEMYIHFLLTQINMKNQKYDERKPKKFLKYNRPVIVKLAELAF
KQLMKGNVMFYEEDLIESGINFTDAAVYSGICTEIFREESVVHHRKIYCFIHLSFQEFLA
AFYVFYLHLLGNKKSLKLFLNEGNMWKKSLYELLKASVDKSLKSKNGHLYLFLRFLLGIS
LRSNQRLLQDLLTHTTNSSETITQYIKDKIKGDEYLSADRCINLFLCLLEMKDQTLYREI
QEFVKSENHSVNQLSPSHCSTIAYMLQISEEVLDEFNLKKYNTSCEGRRRLIPAVVNCRK
ALLAGCNLTDQYCESLNSCLQSSNSSMRELDLSNNDLRDSGVKLLSNGLKSSHCQLNILR
LSICNLTGQCCGSLFSCLQSSNSLRELDLSHNNLQDSGAKLLSDGLKGSCCQLKLKLVGC
NLTDQCCKSLSLSLQSSNSLRELDLSHNNLQDSGVKLLSDGLKSSHCQLNILRLSGCMVT
EEGCCFLASALRSNPSHLRELDLSYNHPGQSLVKLLSDPNYRLDKLNVDHGGEIRIAAGL
KKYACDLTLDLNTANTHLSLSERNRKVSHVEEKQPYPDHPERFDECLQVLCKESLSGCCY
WETEMSGMVYISVAYQGIKRNGKSNECVFGSNGNSWTLNCFKNRFTVNHNKTTIIYGSSC
STRVGVFLNWSAGTLSFYSVSDTHTFTRLHTFKTTFTEPLYAGFGVEAGSSVSLLPLLSP
A
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atgactctctataagaagaaagaggaggatgatgtttacacacacaaagtagcatctcca
gagcccagctgtgtgtctatgaagagtgacgcatccatgggattagggcctaatctctgt
gatggagcagtgacctttgaccctgatactgcctgtaaaatcagtctgtctgagcagaga
aaggagttttctgctcaaaaacgtaaagcagcatctccatcaactgtgtttaaaaagaaa
tgcagatccatgcatcatctccctgaagtcagtggtggagcagtgacttttaaccctaaa
aatgatgtaatcagatcattgatgccccgtctcacctgcactaactctgactgtcagacc
ctcatcatgcagagagtgaaagaccagcacaaagccagcatgaagaacaagtatgagagc
ttatttgagggaatcaaagaacaagagaatcaaaccctcctgaacaggatctacacacag
ctctacatcatagatggagagagtggaggggtgaatgaagaacatgaggttttacagatg
gagaaaatacccagagcacaacactcactccaacacactcaaatctgctgcaatgacata
tttaaatccttacatcaagcagaacccgaggagcaaagaaaacagaagaaagacaaaatc
aagactgttcttactaaaggcatcgctggaattggaaaaactgtctctgtgcagaagttc
attctggactggagtgagggaaaagccaatcaggatgtagatttcatgtttgtgcttcca
tttcgagagctgaacttgattaaagatcaccagtacagtcttcacagacttctgctggac
tttcatcctgaacttcaagatctggaatcaaagatttatgaggagtgtaaagttgtattc
atctttgatggtctggatgaaagcagaattacactgttttcatattatgagaaagtttgt
gacatgactgagtcgtcttcagtgggtgtgttgatgtcaaacctcattagaggagagctg
cttccctctgctctcatctggatcacctccagaccagcagcagccaatcagatcccctca
caatacatcaaacgtgtgacagaaattcagggcttcagtgagactcagaaggaagaatat
ttcaggaagaaaatcagtgacaagcatcaagccagcagaatcatctcacacattagaaga
tcaagaagcctccacatcatgtgtcacatcccggtgttctgctggatctcagccactgtg
cttgaaaacctcctgaaacaagatgacagtccagaaatccctcaaactctgactgaaatg
tacatccacttcctgctgactcaaatcaacatgaaaaatcaaaaatatgatgagagaaaa
ccaaagaaattcctgaagtacaacagacctgtgattgtgaaacttgctgaactggctttc
aaacagctgatgaagggcaatgtgatgttctatgaggaggacctgattgagagcggcata
aacttcactgatgctgcggtttattctgggatttgcaccgagatctttagagaggaatct
gtggttcatcatagaaaaatctactgcttcattcatttaagctttcaggagtttttagct
gctttctatgtattttacttgcatttacttgggaacaaaaaatcactaaagttgtttctg
aatgagggcaatatgtggaaaaaatccctgtatgagctactaaaagcatcagttgataaa
tccttgaagagtaaaaatggacatctgtatcttttcctgcggtttctgctgggcatctca
ctgaggtccaatcagagacttttacaggatctactgacacataccacgaacagctcagag
acaatcacacagtacattaaagacaaaatcaaaggtgatgaatatctctcagctgacaga
tgcatcaatctgttcctctgtctgctggaaatgaaggatcagactttgtacagagagatt
caagagtttgtgaaatcagagaatcactcagtgaatcaactctctccgtctcactgctca
acaatcgcctacatgcttcagatatcagaggaggtgctggatgagtttaatttgaaaaaa
tacaacacatcatgtgagggtagaaggagattgataccagctgtggtgaactgcagaaaa
gctctactagctggttgtaatctcactgatcagtactgtgaaagtttgaattcatgtcta
caatcatccaactcttcaatgagagaactggacctgagtaacaatgacctgcgggattca
ggagtgaagcttctatctaatggactgaagagttcacattgtcaactcaacatactgagg
ttgtctatctgtaatctcactggtcagtgctgtggaagtttgttttcatgtctacaatca
tcaaactcactgagagagctggacctgagtcacaataacctgcaggattcaggagcgaag
cttctgtctgatggactgaagggttcatgctgtcaactcaaactgaaacttgttggctgt
aatctcactgatcagtgctgtaaaagtttgtctttatctcttcaatcatcaaactcactg
agagagctggacctgagtcacaataacctgcaggattcaggagtgaagcttctgtctgat
ggactgaagagttcacactgtcagctcaacattctgagattgtctggctgtatggttaca
gaggaaggctgttgttttctggcttcagctctgagatcaaacccctcacacctgagagag
ttggatctgagctacaatcacccaggacaatcattagtcaaactgctctctgatccaaac
tacagactggacaaactcaatgtggatcatggaggagagatcagaattgcagcaggacta
aagaaatatgcatgtgatctcacactggatttaaacaccgcaaacactcatctgtctcta
tctgagaggaacagaaaggtgtcacatgtggaagagaagcagccgtatcctgatcatccc
gagaggtttgatgagtgtctacaggttctgtgtaaagagagtctgtctggatgctgttac
tgggagactgaaatgagcggaatggtttatatatcagtggcatatcaaggaatcaaaagg
aatggaaagagtaatgagtgtgtgtttggatccaatggaaattcctggactctgaactgt
tttaagaacagatttactgtcaatcataacaagaccacaatcatatatggctcttcttgc
tctaccagagtaggagtgtttctgaactggtcggccggcactctgtccttctacagtgtc
tctgacacacacacattcacacgcttacacacatttaaaaccacattcactgaacccctc
tatgctggatttggggtagaagctggtagttctgtgtctctgttaccccttttatcacct
gcatga
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