Labeo rohita (rohu): 127180254
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Entry
127180254 CDS
T09007
Symbol
capn3a
Name
(RefSeq) LOW QUALITY PROTEIN: calpain-3
KO
K08573
calpain-3 [EC:
3.4.22.54
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
127180254 (capn3a)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127180254 (capn3a)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.54 calpain-3
127180254 (capn3a)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C2: calpain family
127180254 (capn3a)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_6
EF-hand_1
EF-hand_7
CAPN13-like_C_EFh
EF-hand_8
EF-hand_5
Motif
Other DBs
NCBI-GeneID:
127180254
NCBI-ProteinID:
XP_050990227
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All DBs
Position
17:complement(26984342..27005599)
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AA seq
725 aa
AA seq
DB search
MPYTPSGFFCDRLIRERERRDGEGSLSKPIRFSGQDYNTLKQEYLQKKALFEDESFPATV
DSLGFKELGHKSNKVKNIVWKRPKEICDNPQFIVGGASRTDICQGDLGDCWLLAAIACLT
LNDKLLYRIVPQEQSFTEGYAGIFHFQFWHYGDWVDVVVDDRIPTFNNQLVFTKSAERNE
FWSALLEKAYAKLHGSYEALKGGNTAEAMEDFTGGVTEFYEMKEAPKELYKIMKKALERG
SLMGCSIDSLVPARFETRTTTGLVKGHAYSVTAVEECKQSQQKESKVRLVRLRNPWGQVE
WNGPWSDNSKEWETLSKGEKDKLQQQNAEDGEFWMSFEDFKKNYTKIEICNLTPDALEDD
KLHKWTVSVNEGRWVRGCSAGGCRNYPDTFWTNPQYRLRLLEEDDDPEDDEVACTFVVAL
MQKNRRRERKLGANLFTIGFSIYEVPKEMHGNKQHMQKDFFMSNTSKARSRAYINLREVT
QRFRLSPGEYVIIPSTYEPHQEGEFILRVFSEKRNTSEEIENRIEADHPVPDPASTGEES
EEDQQFLSIFQQIAGDVSTGEPLSARGSQMEISANELKDVLNKVVSKYKDIHTEGFSRES
CRSMIALMDMDGKGRLNLQEFRHLWNKIKQWQGIFKRYDFDHTGTISSYEMRNAINDAGF
RLNNQLYDIITMRYANENMNVDFDSFVSCLVRLEGMFRAFQAFDQGGDGTIRLNVLEWLQ
LTMYA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgccctatacgccgtctggtttcttttgcgaccggttaatccgcgaaagagagagaagg
gatggcgaaggatccctgagcaaacccatccgtttcagtggccaggactacaacactctc
aagcaggagtatctccagaagaaggccctctttgaggatgaatccttccccgccactgtg
gactcccttggcttcaaagagctgggccataagtccaacaaagtcaagaacattgtctgg
aagcgtcccaaggagatatgtgataacccacagttcattgttggaggcgctagcaggacc
gatatctgccagggagacctgggagactgctggctgcttgcagccattgcgtgcttgact
ctgaacgacaagctgctgtatcgtattgtacctcaagagcagagtttcactgaaggctac
gctggaattttccatttccagttctggcattatggcgactgggtggatgtcgttgttgat
gaccgcattcccaccttcaacaaccagctggtgttcaccaagtcagctgaaaggaatgaa
ttctggagcgctctgctggaaaaagcttacgctaagcttcatggttcctatgaggctctc
aaaggtggaaacactgctgaagcgatggaggacttcaccggtggagtgactgaattctat
gagatgaaggaggcgcctaaagagctgtataagatcatgaagaaagctctggagagaggc
tccctcatgggctgctccattgattccctggttcctgcgcgctttgaaactcgtactaca
acaggacttgtgaagggtcatgcctactctgttactgctgtagaggagtgtaaacagtcc
cagcagaaggagtctaaagttcgtctggtgcgtctgcgtaacccctggggtcaggtagaa
tggaatggaccttggagcgataattcaaaagaatgggagaccctttctaaaggggaaaaa
gataaacttcagcaacagaatgctgaagatggagaattttggatgtcatttgaagatttt
aagaaaaattacaccaaaattgagatttgcaacctgacccctgatgctctagaggacgat
aagttacacaaatggacagtgtctgttaatgagggacgctgggtaagaggatgctctgct
ggaggatgcaggaattatccagacacattctggacaaatccacaataccgcctgcgtctc
ctggaggaagatgatgacccggaggatgatgaagtggcttgcactttcgttgttgctcta
atgcagaaaaacaggcgtagagaacgcaagttgggtgcaaatctcttcactattggattt
tccatctatgaggttccaaaggagatgcacggaaacaaacagcacatgcagaaggatttc
ttcatgtctaacacctctaaggctcgctccagggcctacattaacctgcgcgaggtgacc
cagcgtttccgtctgagtcctggggagtacgtcatcattccctccacctacgagccccac
caggaaggcgagttcatcctccgcgtcttctctgaaaagagaaatacctctgaggagata
gagaacaggattgaagctgatcatccagtgccggatccggcttcgactggggaagagagc
gaggaggaccagcagttcctgtccattttccagcagatcgcgggggacgtgagtactggg
gagccactgagcgctagggggagtcaaatggagatctcagccaatgaactcaaagatgtc
ttgaacaaggtggtgtctaaatacaaggacatacacactgagggcttcagtcgagagagc
tgtagaagtatgattgccctcatggacatggacggaaaaggaaggctgaacctgcaagag
tttagacacttgtggaacaaaatcaaacagtggcagggaatcttcaagcgctatgacttt
gatcatactggcactatcagcagctacgagatgagaaatgccatcaatgatgcagggttc
cggctgaataaccagctctatgacatcatcaccatgcgctacgccaatgaaaacatgaat
gtcgactttgacagtttcgtcagctgccttgtgcgactggaggggatgttcagagcattc
caggcctttgatcagggtggagacggcaccattagacttaatgtactggagtggcttcag
ctaaccatgtacgcatag
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