Labeo rohita (rohu): 127180262
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Entry
127180262 CDS
T09007
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1 isoform X1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lroh03019
]
127180262 (exd1)
Messenger RNA biogenesis [BR:
lroh03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
127180262 (exd1)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
DUF2529
Motif
Other DBs
NCBI-GeneID:
127180262
NCBI-ProteinID:
XP_050990233
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Position
17:complement(35415595..35425353)
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AA seq
371 aa
AA seq
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MATSSEECRFLDDLKRKRVKITLFDTQITGVIKRITQKKTVILEDVSEVKSGRKFPGVKI
IFGHEIRKVEFTHSANQDTLGNEEYKSEIHSFKKTGLDDVHEDCVNYVVIDELHEKFGPA
VMHIQAQKVIGVGADVFGQTAQERLCWLQVATKKVVYLFDVLLLGGQAFKNGLSMIMENP
HVLKVVHDCRCVARCLKAEFRVNLTNVFDTQVADLMLFYNETGGFLPDRVSSLQEVLRLH
LKLPTTDLLPLWTKELHRKECPEVWYVRPSTPALMNVMAASVCHLLPLRLVLLDALMSDY
TILVDAFMSSYHNQSVHMEQGEWTLPEEAEELLSVRQERMDWAARRYSMTDAGLLKRSSF
DTQADSAFDMA
NT seq
1116 nt
NT seq
+upstream
nt +downstream
nt
atggcgacatcttcagaggagtgcaggtttctggatgatttgaagagaaaacgtgttaaa
ataactctgttcgatactcaaatcaccggcgtcatcaagcgcatcactcagaagaagacc
gtgattttagaggacgtgtctgaagtgaaaagcggacggaaatttccaggcgtcaaaatc
attttcggacacgaaattcgtaaagtggagtttacccattcagccaatcaggacacgctt
ggtaatgaagagtacaaatccgaaatccactcgttcaagaagacgggactagatgatgta
catgaggactgtgtcaattatgtggtgattgatgagcttcatgagaagttcggcccagca
gttatgcacatccaagcacaaaaagtcatcggggtcggcgctgatgtttttggacagact
gcacaagagagactgtgctggctgcaggtggccactaagaaggtagtgtacctgtttgat
gtcctcctgctcggtggacaagcttttaaaaacggcctgtccatgataatggagaatccc
cacgtcctgaaggtggttcacgactgccgctgcgttgcccgatgcctgaaagcagagttc
agggtcaacctcaccaacgtctttgacactcaggtcgctgatctcatgctcttctacaac
gagaccggaggtttcctcccggaccgggtcagctccctccaggaggtgctcagacttcac
ctcaaactccccacgactgacctgttacctctgtggaccaaagaactccaccgcaaggag
tgtcctgaggtgtggtacgtccgcccgtccactcctgccctgatgaacgtcatggccgcc
tctgtctgtcatcttctccctctgcgcctcgtgcttctcgatgccctgatgtcagattac
accattctggtcgatgccttcatgagcagctaccacaaccagtctgttcatatggagcag
ggtgaatggacgctccctgaggaagcggaggagctgctgtcagtgcggcaggagcggatg
gactgggccgctcgacgatactctatgaccgacgccggccttctgaaacgctccagcttc
gacactcaggccgactctgcgtttgacatggcatga
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