KEGG   Labeo rohita (rohu): 127180341
Entry
127180341         CDS       T09007                                 
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
  KO
K14549  U3 small nucleolar RNA-associated protein 15
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    127180341 (utp15)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:lroh03009]
    127180341 (utp15)
Ribosome biogenesis [BR:lroh03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    127180341 (utp15)
SSDB
Motif
Pfam: UTP15_C WD40_CDC20-Fz WD40 WD40_Prp19 WD40_WDHD1_1st WDR55 Beta-prop_EML_2 Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_IFT122_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP WD40_MABP1-WDR62_1st ANAPC4_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_2nd NBCH_WD40 WD40_RFWD3 Beta-prop_WDR19_1st BBS2_Mid Beta-prop_SPT8 WDR90_beta-prop_4th Beta-prop_WDR75_1st Beta-prop_EIPR1 VPS11_N PEP5_VPS11_N Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_DCAF12 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_IFT140_2nd Tnp_22_dsRBD
Other DBs
NCBI-GeneID: 127180341
NCBI-ProteinID: XP_050990276
LinkDB
Position
18:complement(4775200..4782409)
AA seq 518 aa
MASFKPTKVQFLPKLGEKVTEDTLYWRNYKHPVQIKEFGAVTKIDFSPLPPHNYAVTAST
RVHIYGPHSQEPIQTFTRFRDTAYGGSFRGDGKLLVAGSEEGLIRLFDVSGRVALRQFKG
HTKAVHMTSFLSDGLRVVSGSDDLSCRIWDVPSGAELSSIIEHTDYIRALAPSKLNPDLF
VTGSYDHTVKVFDVRSGSSVMTMQHGHPVECVLLYPSEALLVSTGGRYVKIWDLLKGGQE
LVSLKNHHKTVTCACLSSVDNKLLTGSLDRHIKVYNSSYKVVHNFDCDASILSMAIAPED
EVVAVGMTNGVLSIRHRRHKKDKETLTSRRRRGPSYRVFVKGKNFVPRQDDFLVSKPVKQ
YLQKYDKQLKSFEVSKALDTALQMWTRTNKPEVTVAVIIEINRRGTLKNALAGRNEESLT
KILNFLLKHIFDPRFSRPLLMVGDIVLDLYREVIPQSPVVERLLQRLMEVLGREAELQQE
LLQVLGILDTLFASLTPRKEVAALAAPPVDQGSQLQAA
NT seq 1557 nt   +upstreamnt  +downstreamnt
atggcttcatttaaacccaccaaagttcagttccttcccaaactaggagagaaagtaaca
gaggatacgctctactggagaaattacaagcatcctgtgcaaattaaagagtttggtgct
gtaacaaagatcgacttttctcctcttccacctcacaattatgccgttacagcctccacc
agagtccacatatatggacctcactctcaagagcccattcagacgttcacgcgttttcgg
gatacagcgtatggagggagcttcagaggcgacgggaagcttttagtggcaggaagtgaa
gaaggactcatccggctgtttgacgtcagcggccgagtggctcttagacagttcaaggga
cacaccaaggcggtacacatgacctcgttcctgtctgacgggttacgtgtggtgtcgggg
tccgatgacttgtcgtgccgcatatgggacgttcccagtggtgctgagctcagctcgata
attgaacacacagactatatcagagctctcgcccccagcaaactcaacccagatctgttt
gtcacaggttcgtatgaccacacagtgaaagtgtttgacgtgcggtcagggagcagtgtg
atgaccatgcaacacggccatcctgtggagtgtgtgctgttgtacccgtcagaagccctg
ctggtgtccacaggagggcgctatgtgaaaatttgggacctgttgaaaggtggacaggaa
cttgtttctcttaagaatcatcacaaaacagttacgtgtgcatgtctgagttctgtagac
aacaaactgctaacaggatccctggacaggcacatcaaagtgtataactcctcttataag
gttgtgcataatttcgactgtgatgcgtccatccttagtatggctattgcgcctgaagat
gaagtggttgctgtggggatgaccaatggtgtgttgagtatcaggcacaggagacacaaa
aaagacaaagagacgttaactagtcgaaggcgaaggggtccgtcataccgggtctttgtc
aaggggaagaactttgtgcccagacaggatgacttcttggtcagtaaaccagtgaagcag
tatctgcagaaatatgacaaacagctgaaaagctttgaggtttccaaagctctggacaca
gctctgcagatgtggacacgcaccaataaaccagaggtgaccgtagcagtcatcatagag
atcaaccgcagaggaactctgaaaaatgctctcgcaggacgaaatgaagagagcttaacc
aagatcctcaacttccttctcaagcacatctttgacccacgcttttctcggcctctgctc
atggtgggggatattgttcttgatctgtatcgggaggttattccccagtcacctgtagtg
gagcggttgctgcagcgtcttatggaggtgttgggtcgggaagcagaactccagcaggag
cttctgcaagtcttaggaatcctggacacacttttcgcatcgctgacccccagaaaagag
gttgcggcccttgccgccccaccggttgatcaggggtcacagctacaagccgcctga

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