Labeo rohita (rohu): 127180341
Help
Entry
127180341 CDS
T09007
Symbol
utp15
Name
(RefSeq) U3 small nucleolar RNA-associated protein 15 homolog
KO
K14549
U3 small nucleolar RNA-associated protein 15
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
127180341 (utp15)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lroh03009
]
127180341 (utp15)
Ribosome biogenesis [BR:
lroh03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
127180341 (utp15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP15_C
WD40_CDC20-Fz
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
Beta-prop_EML_2
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_C
Beta-prop_IFT122_1st
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
WD40_MABP1-WDR62_2nd
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
BBS2_Mid
Beta-prop_SPT8
WDR90_beta-prop_4th
Beta-prop_WDR75_1st
Beta-prop_EIPR1
VPS11_N
PEP5_VPS11_N
Beta-prop_DCAF4
Beta-prop_HPS5
Beta-prop_DCAF12
Beta-prop_Vps41
Beta-prop_NUP159_NUP214
Beta-prop_IFT140_2nd
Tnp_22_dsRBD
Motif
Other DBs
NCBI-GeneID:
127180341
NCBI-ProteinID:
XP_050990276
LinkDB
All DBs
Position
18:complement(4775200..4782409)
Genome browser
AA seq
518 aa
AA seq
DB search
MASFKPTKVQFLPKLGEKVTEDTLYWRNYKHPVQIKEFGAVTKIDFSPLPPHNYAVTAST
RVHIYGPHSQEPIQTFTRFRDTAYGGSFRGDGKLLVAGSEEGLIRLFDVSGRVALRQFKG
HTKAVHMTSFLSDGLRVVSGSDDLSCRIWDVPSGAELSSIIEHTDYIRALAPSKLNPDLF
VTGSYDHTVKVFDVRSGSSVMTMQHGHPVECVLLYPSEALLVSTGGRYVKIWDLLKGGQE
LVSLKNHHKTVTCACLSSVDNKLLTGSLDRHIKVYNSSYKVVHNFDCDASILSMAIAPED
EVVAVGMTNGVLSIRHRRHKKDKETLTSRRRRGPSYRVFVKGKNFVPRQDDFLVSKPVKQ
YLQKYDKQLKSFEVSKALDTALQMWTRTNKPEVTVAVIIEINRRGTLKNALAGRNEESLT
KILNFLLKHIFDPRFSRPLLMVGDIVLDLYREVIPQSPVVERLLQRLMEVLGREAELQQE
LLQVLGILDTLFASLTPRKEVAALAAPPVDQGSQLQAA
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatttaaacccaccaaagttcagttccttcccaaactaggagagaaagtaaca
gaggatacgctctactggagaaattacaagcatcctgtgcaaattaaagagtttggtgct
gtaacaaagatcgacttttctcctcttccacctcacaattatgccgttacagcctccacc
agagtccacatatatggacctcactctcaagagcccattcagacgttcacgcgttttcgg
gatacagcgtatggagggagcttcagaggcgacgggaagcttttagtggcaggaagtgaa
gaaggactcatccggctgtttgacgtcagcggccgagtggctcttagacagttcaaggga
cacaccaaggcggtacacatgacctcgttcctgtctgacgggttacgtgtggtgtcgggg
tccgatgacttgtcgtgccgcatatgggacgttcccagtggtgctgagctcagctcgata
attgaacacacagactatatcagagctctcgcccccagcaaactcaacccagatctgttt
gtcacaggttcgtatgaccacacagtgaaagtgtttgacgtgcggtcagggagcagtgtg
atgaccatgcaacacggccatcctgtggagtgtgtgctgttgtacccgtcagaagccctg
ctggtgtccacaggagggcgctatgtgaaaatttgggacctgttgaaaggtggacaggaa
cttgtttctcttaagaatcatcacaaaacagttacgtgtgcatgtctgagttctgtagac
aacaaactgctaacaggatccctggacaggcacatcaaagtgtataactcctcttataag
gttgtgcataatttcgactgtgatgcgtccatccttagtatggctattgcgcctgaagat
gaagtggttgctgtggggatgaccaatggtgtgttgagtatcaggcacaggagacacaaa
aaagacaaagagacgttaactagtcgaaggcgaaggggtccgtcataccgggtctttgtc
aaggggaagaactttgtgcccagacaggatgacttcttggtcagtaaaccagtgaagcag
tatctgcagaaatatgacaaacagctgaaaagctttgaggtttccaaagctctggacaca
gctctgcagatgtggacacgcaccaataaaccagaggtgaccgtagcagtcatcatagag
atcaaccgcagaggaactctgaaaaatgctctcgcaggacgaaatgaagagagcttaacc
aagatcctcaacttccttctcaagcacatctttgacccacgcttttctcggcctctgctc
atggtgggggatattgttcttgatctgtatcgggaggttattccccagtcacctgtagtg
gagcggttgctgcagcgtcttatggaggtgttgggtcgggaagcagaactccagcaggag
cttctgcaagtcttaggaatcctggacacacttttcgcatcgctgacccccagaaaagag
gttgcggcccttgccgccccaccggttgatcaggggtcacagctacaagccgcctga
DBGET
integrated database retrieval system