Labeo rohita (rohu): 127180390
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Entry
127180390 CDS
T09007
Symbol
snrpa
Name
(RefSeq) U1 small nuclear ribonucleoprotein A
KO
K11091
U1 small nuclear ribonucleoprotein A
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127180390 (snrpa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127180390 (snrpa)
Spliceosome [BR:
lroh03041
]
Complex A
U1 snRNP components
U1 snRNP specific factors
127180390 (snrpa)
Complex B
127180390 (snrpa)
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SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_5
DUF4523
Psu
Motif
Other DBs
NCBI-GeneID:
127180390
NCBI-ProteinID:
XP_050990359
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All DBs
Position
18:19062488..19067178
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AA seq
280 aa
AA seq
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MASQEMRLNHTIYINNLNEKIKKDELKKSLYAIFSQFGQILDILVSPTLKMRGQAFVIFK
EINSASNALRSMQGFPFYDKPMRIQYAKQDSDIIAKMKGTYVERDRKKEKKKPKAPEAGA
GKKASAATAAMAGVPAAMPGMPPMSQAPRMMPMPGQPPYMPPPGMMPPPGMAPGQMPPGA
MPPGQMMPGQMPGQMPQQVSENPPNHILFLTNLPEETNELMLSMLFNQFPGFKEVRLVPG
RHDIAFVEFDNEVQAGAAREALQGFKITQSNAMKISFAKK
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atggcgagccaggagatgcggttgaatcacactatttacatcaacaacttgaatgaaaag
attaaaaaagatgaactgaagaagtcgttgtatgctatattctcccagtttggacaaatt
ctggacatcctcgtttctcctacattaaaaatgaggggtcaggcatttgtgatcttcaag
gaaatcaacagtgcttccaacgcactccgctctatgcaaggcttccctttttatgacaaa
cctatgcgtattcagtatgcaaaacaggactctgatatcattgcgaaaatgaagggcaca
tatgtggagcgagaccgtaagaaggaaaagaagaagcctaaagcccctgaagcaggcgct
gggaaaaaggcttctgctgccacagctgctatggccggagtacctgcagccatgcctgga
atgccacccatgagccaagccccccgcatgatgccaatgcctggccagcctccctacatg
cctccgcctggtatgatgccacctcctggcatggcacctgggcagatgcctccaggtgct
atgcctccaggtcagatgatgccaggacaaatgcctggccagatgccacagcaggtgtcc
gaaaaccctcccaaccacatcctgtttctcaccaatctcccagaggagacgaacgagctc
atgctgtctatgctgttcaaccagtttcctggattcaaagaagtccgtctcgtccctggt
cgtcacgacatcgcttttgtggagtttgataatgaggtgcaggcgggcgcagccagagaa
gctttgcaaggctttaagatcacacagagcaatgcaatgaaaatctcatttgcaaagaaa
taa
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