Labeo rohita (rohu): 127180394 Help Entry 127180394         CDS       T09007                                  Symbol tnr Name (RefSeq) LOW QUALITY PROTEIN: tenascin-R   KO K06252   tenascin Organism lroh  Labeo rohita (rohu) Pathway lroh04510   Focal adhesion lroh04512   ECM-receptor interaction Brite KEGG Orthology (KO) [BR:lroh00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     127180394 (tnr)  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     127180394 (tnr)  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    00536 Glycosaminoglycan binding proteins [BR:lroh00536]     127180394 (tnr) Glycosaminoglycan binding proteins [BR:lroh00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    127180394 (tnr) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 Fibrinogen_C Pur_ac_phosph_N EGF_Tenascin Tor_FN3_3nd EGF_2 Interfer-bind DUF4998 DUF3515 Motif Other DBs NCBI-GeneID:  127180394 NCBI-ProteinID:  XP_050990366 LinkDB All DBs Position 2:23908293..24086950 Genome browser AA seq 1348 aa AA seqDB search MWGCTMAMQGSLVSLALLFFGIQAVPNPTSKLVRTTRVRRQVPEGGGSSNNQTQAMIFNH VYNINVPWESLCSVDLDTVPGTNKGTAGSDKMPTEYTEETVDSDSQVTFTHRINIPKQAC ACPAATAMEQLASRIEMLEREVSLLRAQCSSSCCGESSVMGRLDFVPQCGHGTFSMEICG CVCEEGWIGKNCSEPRCPDDCSGQGICIEGECVCDRNFGGENCSEPRCPGDCSDRGLCID GECVCEEAYAGEDCSLGRCLNDCSDQGTCVNGTCQCRPGFLGEDCSLIFCANNCSQKGVC KDGFCACQEGYTGDDCTSVSPPMNLQVRGVSENTIDLEWEGPVILTDYLITYAPTTPGGV QLEIRVPGNVTNTTIKGLEPGLEYNINVYAVIDNIISAPMNTLVSTYLSNPDGLLFKSIM ETSVEVQWQPLDYLFDGWEISFIPKDNDGGMTAQLPSTITSFLQTGLRPGEEYTVNLVAL KDQGRSQPVTATVITLIDGPTQLIVRDVSDTVAFVEWSPPKAKVDQIILRYGMVGVDGPK TTFRLQPTLSQYSLQVLRPGSMYEVSVSGVWNGTESGAITTEFTTEIDAPKNLRVLSKTS TSLELEWDNSEADVEGYRVVYSTLAGDQYDKVIVPRNDGATTKTTLTDLLPGTEYGIGIS AVLGANQSTPATMNARTGLDVPLDLTVTASTDNTITLLWGIVQGPIDHYRVTYTSSTGVT TELTVPKDVNTTTLTDLEPGTEYTITVAAQRGRQQSTAATIDAFTGFRPITQLFFSDVTS DSLTVAWSAPAPPADAFILNYNAQDSSDDSEIALDGSKTRITLTGLLPTRRYTVTLVTMH GNVTSKPVIGSIATGMDPPRDMTVLYVTEESVTISWIQPLASFDYYKMSYQSPKGRMDNV VIDNDVTNHTLTSLHPATEYEIKLNAVRGSQESKVITSTVFTAMDMPMELTALNVTPQGA LLRWNPPVSSVDNYVLTLTRNQVTADTFLVEGNKQEYQLSQLIPSTTYSVALYATKGPLT SGTVIANFVTPMDAPQNLTASEINHRSALISWQPPIADIDNYMLTYKAADGSRKELILDA EDTWIRLEGLAETTEYTVRLQAARGLETSAIVSTSFTTGNRLFPTPQNCVQHLLNEETLS GIYTIYINRDLSQGVQVYCDMTTDGGGWIVFQRRQNGLTDFSRKWSDYKIGFGNLEDEFW LGLDNIQKIAAQGRYELRIDMKDGQESVYANYDRFSIGDSKSLYKLRIGEYNGTAGDSLS YHQSRPFSTKDKDNDIAVTNCALSYKGAWWYKNCHRANLNGKYGESRHSQGINWYHWKGH EFSIPFVEMKMRPFNYRSISGKRRRSTH NT seq 4047 nt NT seq  +upstreamnt  +downstreamnt atgtgggggtgcaccatggcaatgcaaggttcattggtgagcctggctttactgttcttt gggattcaagctgttcctaaccccaccagcaaactagtgaggaccacaagggtgaggcga caggttcccgaaggcggggggtcctctaacaaccagacgcaggccatgatcttcaatcat gtatacaacatcaacgtaccatgggagtcactctgttcagtggacctagacacggtacca gggacaaacaaaggtacagctgggagtgacaagatgccgacagagtacacagaagagacg gtggactcggacagccaggtgaccttcacccatcgcatcaatatcccaaagcaggcctgc gcttgtcctgcggctaccgccatggaacagctggcgagccgcatagagatgctggagagg gaggtgtccttgcttcgagcgcagtgtagctccagctgctgtggagagagctccgttatg ggtcgcttggacttcgtccctcagtgtggccacggcacgttcagcatggagatttgtggg tgtgtttgtgaagaaggatggattggcaagaactgctctgaaccccgctgcccagatgac tgctccggccagggcatttgcatcgaaggcgagtgtgtatgcgaccgtaactttggcggt gagaactgctcagagcctcgatgtccaggtgattgctctgacagggggttgtgcattgat ggggagtgcgtctgcgaggaagcctatgcaggggaggactgctcgctgggcagatgtctg aatgactgctcagatcaaggaacctgtgtgaacggaacctgccagtgccgacccggcttc ctgggggaagactgctctctcatcttctgtgctaataactgcagccagaaaggggtgtgt aaggatggtttctgcgcctgtcaagaaggatatacaggagatgactgcacttcagtgtca cctcctatgaatctgcaagttcggggagtgtcagagaacaccattgatcttgaatgggag gggcctgtgatcctgacagactatctcatcacttacgcccccacaacccctggtggagtc cagctagagatcagagtcccaggaaatgttaccaacaccaccatcaaagggctggagccg ggtttggaatacaacatcaatgtgtacgcggtgatcgacaacatcataagtgccccaatg aacaccttagtctctacctatctctcgaatccagacggtttactcttcaaatccatcatg gagacatcggtggaggttcagtggcaacccttagactacttgtttgatggttgggaaata agcttcattcccaaggacaatgatggaggtatgacagcacagctacccagtaccatcacg tcgtttctccaaacggggctgcggcctggggaagaatacactgtcaacctggtggccttg aaagaccaaggaaggagccagcctgttaccgcaaccgtcatcacattgatcgatgggcca acacagcttattgtacgagacgtctcagacacggttgcctttgtggagtggagcccacca aaggctaaagtggaccaaattatattgcggtacgggatggtaggggtggatggaccaaag accacttttcgcctgcagcccactctaagccagtactccctccaagtcctgaggcctgga tctatgtatgaagtgtcagtcagtggagtctggaacggcactgagagtggagccattaca acagagtttaccacagaaatcgatgcaccaaagaacctgagagtgctgtcgaaaacttcc actagcctggagctggaatgggacaatagtgaggcagatgtagaaggctacagggtggtt tacagcacactggctggtgatcagtatgacaaagtcattgtcccacgcaatgatggtgcc accaccaaaacaactctcactgatttactgcctggcacagagtatggcataggaatttca gcagttctaggtgccaaccaaagcaccccagcaacgatgaatgccagaacgggtttggat gtccccctggatttgactgtcacagcctccacagacaacactatcaccctgttgtggggc atagtgcaggggcctattgatcactatagggtgacctacacttcctccactggagtcaca actgagctaacagtgcccaaggacgtcaacaccaccacactgacagatctagagccgggc accgagtacaccattacagttgcagcacagagaggcaggcagcagagcactgcagctact attgatgccttcacagggttccgccctatcacacagctcttcttctccgatgtcacttct gattcattgactgtggcatggagtgcaccggcaccgcctgctgacgcattcatcttgaac tacaacgctcaggactccagtgatgattctgagattgctctagacggctccaaaaccaga atcaccctcactggtctcctgcccaccaggcggtacaccgttaccttggttaccatgcac ggcaatgtgacctcaaagccagttataggctcaatcgcaacaggaatggaccctcccaga gatatgactgtactgtacgtcacagaggaatctgtaaccatatcatggattcagccgctc gcgtcattcgattactacaaaatgtcttaccaatcaccaaaaggtaggatggacaacgtg gtgattgacaacgacgtcaccaaccacaccctaaccagcctccatccagcaacggagtac gagatcaagctgaacgcagtgagaggaagccaagagagcaaggtcatcacctctactgtc ttcacagctatggacatgcctatggagctcactgcgttgaatgttacacctcagggggct ctgctacgttggaacccccctgtttccagtgttgataactacgtgctcaccctcacccgg aaccaagttacagcagacaccttcttagtggagggtaacaagcaggagtaccagctgagt cagctcatccccagcaccacctactcagtggctctttatgccactaaaggtcctctcacc agtggcaccgtcatcgccaactttgtcacacccatggatgcgccccagaacctgacagct agcgagattaaccatcgaagcgccctcatatcctggcagccgcccatcgcagacatcgac aactacatgctgacctacaaagcagcggacggcagtcgaaaggagctgatcttagatgcc gaagacacatggatccgtctcgaggggctggcggagaccaccgaatatactgtgagactg caagccgccagaggattagaaaccagcgccattgtttctacatctttcacaacaggaaac cgattgtttcccacgccacagaactgcgtgcaacaccttctgaacgaagagacgctaagc ggaatctacaccatctacatcaatagagacctcagccagggtgtgcaggtttactgcgac atgaccactgatggaggcggctggatagtgttccagagacggcagaacggcctgactgat ttctccaggaagtggagtgactacaagatcggcttcggcaacctggaggatgaattctgg ctcggcttggataacatacagaagattgcagctcaaggtcgttacgagctccgcattgac atgaaagacggccaggagtccgtatatgccaactatgacaggttttccattggagattcc aagagtctctacaaactgcggataggagagtataatggcaccgcaggtgactcgctaagc taccaccagagcagacctttctccaccaaggacaaggacaatgatatcgccgtcaccaac tgtgcattgtcttacaaaggagcctggtggtacaaaaactgtcatcgggccaaccttaac ggcaaatatggagagtctagacatagtcagggtataaactggtatcactggaaaggccat gagttttccatcccttttgtggagatgaagatgagacctttcaactaccgcagcatcagt ggcaagcggaggaggtccacccattaa

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