Labeo rohita (rohu): 127180401
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Entry
127180401 CDS
T09007
Symbol
rapsn
Name
(RefSeq) LOW QUALITY PROTEIN: 43 kDa receptor-associated protein of the synapse
KO
K24924
receptor-associated protein of the synapse
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
127180401 (rapsn)
Domain-containing proteins not elsewhere classified [BR:
lroh04990
]
Other domain-containing proteins
Tetratricopeptide repeat-containing proteins
127180401 (rapsn)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rapsyn_N
TPR_12
TPR_1
TPR_2
TPR_8
zf-RING_11
zf-RING_5
zf-RING_2
SNAP
DUF3856
TPR_MalT
ARM_TT21_4th
zf-RING_Vps41
Prok-RING_4
zf-RING_UBOX
betaPIX_CC
AKNA
zf-rbx1
zf_RING_Vps8_fungal
Motif
Other DBs
NCBI-GeneID:
127180401
NCBI-ProteinID:
XP_050990369
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Position
18:12941553..12951446
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AA seq
423 aa
AA seq
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MVIFMRDFVAEMGQDQTKQQIEKGLKLYQSNDTEKALYVWMKVLRKTSDLGGKFRVLGCL
ITAHSEMGKYKEMLQYSLAQINTAREMEDPDYLTEGYLNLARSNEKLCEFQKTVSYCETC
LNMQGTTVSLQLNGQVCLSMGNAYLGLSVFQKALVSYEKALRYAHNNDDKMLECRVCCSL
GNFYIQLKDYEKALFFPCKAAELVNDYGKGWSLKYRAMSQYHMSVAYRKLMRLADAMECC
EESMKIALQHGDRPLQALCLLNFADIHRCQKDVDKAFPRYESSMCIMSEIGNRLGQASIY
VGVGKCWILQKEYDKALDSLQRAHDLAEAIGNKLCILKVHSLCEGIYRCKEQQDELREQV
VKFLQCVEELELYCGMCGESIGEKNQQLQALPCSHIFHLKCLQTNGTKGCPKCHRSSVKL
GFV
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atggttatttttatgagggactttgtagcagaaatgggtcaggaccaaaccaaacagcag
atcgagaaggggctgaagctttatcagtcaaatgacacagaaaaggctttatatgtctgg
atgaaagtgttaaggaagacatcagatctgggggggaagtttcgggttttagggtgtctg
atcacagcacattcggaaatgggaaaatacaaggagatgctacagtactccctagctcag
ataaacacagccagagagatggaggacccggactacctgacggagggctacctgaacctg
gcacgcagcaatgagaagctttgtgaattccagaagacggtctcatattgtgagacctgc
ttaaacatgcagggcaccactgttagtctacagctcaacgggcaagtgtgtttgagcatg
ggcaatgcctatctgggccttagcgttttccaaaaggccttagtgagttatgaaaaggcc
ctgcgatatgctcacaacaatgacgacaagatgctggagtgccgggtctgctgcagtttg
ggcaacttctacatccagcttaaggattatgagaaagcactcttctttccttgcaaagca
gctgaactggtgaatgactatggtaaaggttggagtctgaagtaccgtgccatgagtcag
taccatatgtcggtggcctacaggaagctgatgcgcttagcagacgcgatggaatgctgc
gaggaatcaatgaagattgcattgcagcatggagatcggccccttcaggctttgtgtctg
cttaactttgctgatattcatcgctgtcagaaagatgtcgataaagcattccctcgctat
gagtcctccatgtgcataatgtcagagatcggcaaccgccttggacaagcatccatctac
gtaggtgtggggaagtgctggattctgcagaaggaatacgacaaggctttggactcattg
caaagagcacatgatctggccgaggcgattggaaacaagctgtgtatcctaaaggtgcac
agtctgtgtgaaggcatctaccgctgtaaggagcagcaggatgagttgagagagcaggtg
gtgaagttcctgcagtgtgtggaagagctagagctctactgtggcatgtgtggggagtcc
atcggagagaagaaccagcagctgcaggctttgccctgctctcacattttccacctcaag
tgtctgcagacaaacggcacaaagggctgtccaaaatgtcatcgctcttcagtgaagctg
ggttttgtatga
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