Labeo rohita (rohu): 127180467
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Entry
127180467 CDS
T09007
Symbol
si:ch211-220f16.2
Name
(RefSeq) trichohyalin isoform X1
KO
K20478
golgin subfamily B member 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127180467 (si:ch211-220f16.2)
Membrane trafficking [BR:
lroh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Rab associated proteins
127180467 (si:ch211-220f16.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAM76
Motif
Other DBs
NCBI-GeneID:
127180467
NCBI-ProteinID:
XP_050990478
LinkDB
All DBs
Position
18:23795041..23840803
Genome browser
AA seq
1951 aa
AA seq
DB search
MLRWFSAEESGSAHGAPGSPQVDMGSDIRFSEVTEQLTQMEELVAHLKELIREKDAALSG
KDDEVKELTEQMQRLRGERENFQSKLDAERHITRARIKDLMEKHEAELLRAADKHETELS
EREQALRRQLETFQRSISQPADASTNLPTSNTAQKVTELQAQVKLKETEASKAEAKFLKM
KAWSKSRIRQLEVELKKVQSGVCLDMSPDVTSLHSRITELQEEREEMLGKLELYEDMKAK
NDELQKQLMEYKEQQRKMQADLEQVTKRAASQVSETGSMDDVQVMEWQEMVTMVTESERV
QDQGHEKNVMAFRMSHIEEEREGLIEDDWLFPGCSDPALANRQQEVEEELAQARGLSPQK
SRKPKYFTPRSLQFEEMEKCKKAMQVWKDMREDLEFHNRQDPIGPTDCDVLVNGENMGGW
WPQHSAADTDGLRSVVEELELERNQLQEQILVLEKQCQDLEDRLQLQARIELLQATFGID
EDGRALSVSQNESERLQAQVANLRSQQIRETEKNQLLVASLNKQLKGLSSTQECLESSLM
EKEHTLARTSEKLEFIDNLKEALETKEKQNQETSEKLLQTEHNLAEVTKTCSTFEKENSE
MKAAVADLTLKLGVLKDKVQKQEATIESLQNDLVQTNDELDRLNAAHLEERAQLVHDLQS
CEREIDRLQDVITEKDKDILALTSSTAEYSEQIHELKQKMKFKEDVLSKIEQDVQIFRDP
QLSDQQFFNVLIPQLIEQLKRTETDLKVSKKEGESRSNEIKDLTKQTEEDKKTVQNLRME
IQKLNMNLKDQPLNKEQVHEKDSFQEERNKLLAKVSKYESELLMFSRKLEEQDECQEQLK
QDVQEKSKIISSLEEKLKIVQEETVAERDRFNKELKIRDEAKENLEKDLSVKIESNKSVN
NNNQKLKESLEQTLGELTRQKEQLDNAKEQMQALQDKNYNLLLQVESLTNDNCHLKREFE
ASVQSLSEVSEKKKRLASKISEVEQQLSESVKTIEHLQRDKEELTLKGNELNKELEQNNQ
SMAKIVLEKDGFVRLHETLGRQNQQLQEMFEEKQKEVITLTQVVSEMNNKVALTLEENEK
LASKIASLDEQNKYLQKQTNEQMTSLTETTKERDNLQNKILIFETQDMENCKIIEGLLKQ
KEDLLLQVEERKVIEQKLQSRAETLQEKSLECAALSKCLRETKEEVDHLKRELESSTSQV
LQYTHIVFEKEKTITDQNTQMETCQHQLKQLHDSLSILQEQAINHKSGLTEKDTLLQKES
NSCRLLQKELSHEQELVITLQQEMSSLKMEFSRLNQTLEVKEKTLKEKNLECHNHSEELY
KRNESVLSLTSQLGIMNENIVKLESDNAHLKGTLEEHLTENVRLKEELKQKQIEVVEYQD
NVQAMNDQNVIIKSELKNSMAEIFRRQEMITSLQNELESKRVELASLSGQLESKHSQLEA
LQLTLQGKEEAFRTQKMYVNNMQVKVLENESQITQKISAISELHEEVQNLQTALQEKDRL
LLIKDQEFSLVKKTLMAQSESCESRLKLEMDEIAKFQGELKSLQEKNDHLINIINEKDSL
LMQEKEKCLRLQGSASELENTVSQLTCQIERLTLDITQLRETQTEKEQVTFAAQSQMQKL
DELYKKLQVEHDLTKQELLKVINEKSLKEEEICKLVEEKEEICRNSNYQIQRIQDQLQHH
KWQSSKVEEEKTMATEKQHILGQDVSPEHWVQLHSQLQHCQREIQQRDFSLQQLNIKLQQ
TTEEKEGVTSQLSTVSKMLRDTQQTVSELQNRCCWLERQFQNQYSPTQGSGYTEVPPGAP
QEPISANFNPSGSDSGDLRIRLAEAEFHLSQLNSRLEEERSRREVAEEAMRLTEQRAKSM
ESNQSRHSQRDFSIQLEKDEEQYEDLVLRPGRHRFMHKMKSGVHLCQRWFKGSSIYCCSK
LLPSRGKARYIFMGYLLMLHVLVFVCLSWSL
NT seq
5856 nt
NT seq
+upstream
nt +downstream
nt
atgctgaggtggttttcagcagaagagtctggctctgcgcatggagctcctggctccccg
caggtggacatgggcagtgatataagattttctgaggtcactgagcagctaacacagatg
gaggagcttgtggcccatttaaaagaactgatcagggaaaaggatgcagcactcagtggt
aaagatgacgaagtcaaggagctgacagaacaaatgcagcgcttgcggggtgagagagaa
aactttcagtcaaagctggacgcagaacgtcacattactcgggctcggatcaaggatctg
atggagaaacatgaggctgagctgctcagggctgctgataaacatgagactgagttgtca
gagagggagcaggccttacgccgacagcttgagacttttcagcgctctatatcacagcct
gcagatgcatcaacaaacctacccacctccaacacagctcagaaagtcacagagctgcaa
gctcaagtgaagctgaaagaaacagaggccagtaaagcagaagcaaagttcttgaaaatg
aaagcttggtccaaatctcggatcaggcagctcgaggtggaactcaaaaaagttcagtct
ggagtatgtctcgatatgtcccctgatgtcacgtcccttcatagtcgcattactgaattg
caagaggagagggaggaaatgctcggcaaactggagctgtatgaagatatgaaggcaaaa
aatgatgaacttcagaagcagcttatggaatataaggaacagcagaggaagatgcaggcc
gacctggagcaggtgaccaaaagagcagcatcacaggtgagtgagacaggcagcatggat
gatgttcaggtgatggagtggcaagaaatggttaccatggtgactgagtcagagagagtt
caagatcagggtcatgagaagaacgtcatggccttcagaatgagccacatcgaggaggag
agagagggactgattgaggatgactggttgtttcctggctgctccgatccagcattagcc
aatcggcaacaggaagtggaggaggagttggcccaggcccgtggactcagcccacagaaa
agcaggaagcccaaatatttcaccccacgcagcctgcagtttgaagaaatggaaaaatgc
aagaaggccatgcaggtttggaaggacatgagggaggacttggagtttcataataggcaa
gacccgataggtcccactgattgtgatgttcttgtaaatggagagaatatgggtggatgg
tggccacagcacagtgctgcagatacagatggtttgaggtctgtcgttgaggagctcgaa
ctagagagaaatcaactgcaggaacagattttggtccttgagaaacagtgccaagatcta
gaggaccgtctgcaacttcaggctcgcattgaattactacaggcaacgtttggtatagat
gaagatggtcgagcattgtccgtgtctcagaatgaatctgagcgcctgcaggcacaggtc
gccaaccttcgcagtcagcagattagagagacagaaaagaatcagctgctcgttgccagc
ctgaacaaacaactcaaaggactgagcagcacacaggagtgtctggagtcctcactcatg
gaaaaagagcacacgcttgccagaacctcagagaaactggaatttattgacaatctgaaa
gaggctttagagacaaaggaaaaacaaaaccaagaaacaagtgaaaaacttcttcagact
gaacacaatctggctgaagttacaaagacatgcagcacctttgagaaggaaaactcagag
atgaaagcagctgttgcagatctgacactcaagctcggtgtgctgaaagacaaggtccaa
aaacaagaggccactatagaatcattacagaacgatctggttcaaacaaacgatgagctc
gacagactgaatgcagctcatctagaagaaagagcccagctggttcatgacttacagagc
tgtgagcgtgaaatcgatagacttcaagatgtcatcactgaaaaggacaaagacatattg
gcactaacatccagcacagcagaatattcagagcaaattcatgaactaaaacagaaaatg
aagttcaaagaggatgtgctgagtaaaattgaacaggatgttcaaatctttagagaccca
cagctttctgaccaacagttcttcaatgtgttaatacctcagctgattgaacaattaaag
agaaccgaaactgatctaaaagtatcgaaaaaagaaggcgagtcaagaagtaatgaaatt
aaagacttaacaaagcaaacagaagaggataagaaaacagttcagaatctccgcatggaa
atacagaagctgaatatgaatctcaaagaccagccattgaataaagaacaagtgcatgaa
aaagactctttccaggaggagcgtaataagttgcttgctaaagtcagcaaatatgaaagt
gagcttctgatgttttctagaaagcttgaggagcaggatgaatgtcaagaacagcttaag
caagatgtccaagaaaagtcaaagataatatcctcattggaggagaagctaaagattgtt
caagaggagacagtagcagagagggatagatttaacaaagaactcaagattcgggatgaa
gccaaagaaaaccttgagaaagatttgtctgttaaaattgagagtaataaatcggtgaac
aataacaaccagaaacttaaggaatcgcttgagcagaccttgggagagcttacaagacaa
aaggagcaactggataatgctaaggagcaaatgcaagctctgcaagataagaattacaac
ttgcttttacaagtcgaaagtctcactaatgacaattgtcatttgaagagggaatttgag
gctagtgtccagtctctctctgaagtttcagaaaaaaagaaaagattggcaagcaaaata
tctgaagttgaacagcagctttcagaaagtgttaaaacaatagaacacttgcaaagagat
aaggaagagctaacactcaaaggaaatgaactgaacaaagaacttgagcaaaacaatcag
tcaatggctaagattgttttagaaaaagatggctttgttagactccatgagacactgggt
agacaaaatcaacaattacaagaaatgtttgaagagaaacaaaaagaagtgattacactg
acccaagttgtgtctgaaatgaacaacaaggttgcactaacgcttgaagaaaatgaaaaa
cttgcttctaaaattgctagtcttgatgagcagaataagtaccttcagaaacaaacaaat
gaacagatgacgtcactcacagaaacaaccaaggagagggataatctgcaaaacaaaatc
ttgatttttgaaacacaggatatggaaaactgtaaaatcattgaaggcttgcttaagcaa
aaggaagatttgcttttgcaagtagaggaacgcaaagtcattgaacagaaattgcagtct
cgagctgagaccttacaggaaaagtctttagaatgtgcagccctctcaaaatgtctcagg
gagaccaaagaggaagtagatcatcttaagagagaacttgaatcctccacttctcaagtc
cttcaatacacacatatcgtttttgaaaaagaaaagaccataacagaccaaaatacccaa
atggaaacttgtcagcaccaacttaagcaattacatgacagtctttccattcttcaagaa
caagctattaatcataaatcaggtctgacagaaaaagacacactgctgcagaaagaatcc
aattcatgccgtttgctacaaaaggaacttagtcatgaacaagaacttgttattaccctt
caacaagagatgagctctctgaaaatggagttttccagactgaaccagactttagaagtg
aaagaaaaaactttaaaagagaaaaatcttgaatgccacaatcactcagaggaattgtac
aaaagaaatgagtctgtgctttcactaactagtcagcttggtattatgaatgagaatatt
gtgaagcttgaatctgataatgcacatttaaaaggcactttagaggagcatttgacagaa
aatgtaagactaaaagaggagttgaaacagaaacaaatagaggttgtggagtaccaagat
aatgtccaagcaatgaatgaccaaaacgttataattaaatctgaactgaagaattcaatg
gcggaaatatttagacgacaagagatgatcacatcactacaaaatgaattggaaagtaaa
agagttgaactggcgtctttgtcaggacaattagaatccaaacactctcaacttgaagca
ttacaactcactctgcaggggaaagaggaagctttcaggacacagaagatgtatgtaaat
aatatgcaagttaaagtgttggaaaatgaaagccaaatcacccagaaaatatcagcgatc
tctgagctgcatgaagaagttcagaatttgcaaacagctttgcaagaaaaagataggtta
ctgttaattaaagaccaagagttctctctggttaagaagacattaatggcacaatcagaa
tcatgtgaatccagactgaaattagaaatggatgaaattgctaaatttcaaggagagttg
aagagcttacaagaaaagaacgaccatctcatcaacatcattaatgaaaaggattcttta
ctgatgcaggagaaggaaaagtgtcttcgcttgcaaggtagtgcgtcagaactggaaaat
acagtttcacaactgacctgtcaaatagaacgattaaccttggacatcacacagctcagg
gaaacacaaactgagaaggaacaagtcacgtttgctgctcagtcacaaatgcagaagctg
gatgaactatacaagaaacttcaagtggagcacgatttgaccaaacaagagttgcttaaa
gttatcaatgaaaaatctttaaaggaagaagagatctgtaaattggttgaggaaaaggaa
gagatctgcagaaattctaattatcagattcagagaattcaagaccagctacaacaccac
aagtggcaatccagtaaagtggaagaagagaagacaatggcaacagagaaacaacatatc
ctgggtcaagatgtgtccccagaacactgggtccagttgcatagccaactacaacactgc
cagcgagagatccagcaaagggattttagccttcaacaacttaacattaagctgcaacag
acaactgaggaaaaggaaggggtgacctcccagttaagcactgtttccaagatgctcaga
gacacacagcagactgttagtgagctccagaatcgctgttgttggctggagagacaattt
caaaaccagtattcacccacgcagggttcaggctatacagaagttccaccaggagcccct
caggaaccaatcagtgccaattttaacccaagtggatcagacagtggagatctcaggata
aggctggctgaggcagagtttcatctgtctcagttaaactcgagattagaggaggagaga
tcaaggagagaggtcgcagaggaagccatgcggttgacggaacagagagctaagagcatg
gagtcaaaccaatcacggcattctcaaagggactttagtattcagctggaaaaagacgag
gaacagtatgaagaccttgttcttcgcccaggccggcaccgtttcatgcacaagatgaag
agtggggttcacttgtgccaacgctggtttaaaggaagtagcatatactgctgttccaaa
ctactgccatccagagggaaggcacgctacatattcatgggctaccttcttatgcttcat
gtgctggttttcgtgtgcctcagttggtccctgtag
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