Labeo rohita (rohu): 127180469
Help
Entry
127180469 CDS
T09007
Symbol
trip12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127180469 (trip12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127180469 (trip12)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
127180469 (trip12)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
HECT type E3
127180469 (trip12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
WWE
Motif
Other DBs
NCBI-GeneID:
127180469
NCBI-ProteinID:
XP_050990484
LinkDB
All DBs
Position
18:complement(32025160..32075494)
Genome browser
AA seq
2096 aa
AA seq
DB search
MSNRPNSNPGGSLRRSQRNTAAAQPIDHTIAGRLQPEQVNQKANSPPESRRSNSKASKAP
PSSAVGSARGHASRRNSLSLSVGSHSIPDPDLEAAGTSGQQGRREGSSTRALKRSSASEP
NISFSPSPAKRPKAVSSHLLESSSSGPSAPTTTPEVTEPRKAPASVSTKSKKRRLAAEPA
PARALSKKSASYPGPSGASSTPSQKRKKADASSLSSSSSSSLPSSSSAAGPLPPRSEASR
AAKPTKLASKSAASAKAGCSTVTDSSSSSASSSSSSSSSSSAATGTNSCAPQGARLKQGK
DQSKARRSRSASSPSPRRSSRDKEQNKAAGSSKFDWTSRFNSKVNLPKPKLSLPGSAKAE
TSSKPGPSGLQAKLASLRKSTKKRSESPPAELPSCRRSTRQKTTGSCASTSRRGSGLGKR
GAAESRRQEKMADSDNNQDGANSSAARTEETPQGASASSSVAGAVGMTTSGESESDDSEM
GRLQALLEARGLPPHLFGPFGPRMSQLFHRTIGSGASSKAQQLLQGLQATGDESQQLQAA
IEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHASRALTYMMEALPRSSAV
VVDAIPVFLEKLQVIQFIDVAEQALTALEMLSRRHSKAILQAGGLADCLLYLEFFSINAQ
RNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTCLCFARLVDNFQHEEN
LLQQVASRDLLTNIQQLLVLTPPVLSSGMFIMVVRMFSLMCSNCPCLAVQLMKQNIAETL
RFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPREGIFAVDAMLKKGSAQTT
EGAIWQWRDDRGLWHPYNRIDSRIIETAHQNGEDEISLSTLGRVYTIDFNSMQQINEDTG
TARAIQRKPNPLANPNTGGHLEVRREDARAQLMKEDPELAKCFIKTLFGVLYEVYSSSAG
PAVRHKCLRAILRIIYFADAELLKDVLRNHAVSSHIASMLSSQDLKIVVGSLQMAEILMQ
KLPDVFSVYFRREGVMHQVKNLAESEVFLTSPPKACTSGTASLCTTTITTATTTAASNVT
PDLGSPSFQHSMDDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSPPRDDDKVDNQAKSPT
TTQSPKSSFLASLNPKTWGKLGTQTNSANSEPSRTAGVSGLARVPPKDSVSNNRDKIKAW
IKEQASKFVERYFNSESVDGSNPALNVLQRLCTATEQLNLQVDSGVECLEEISSIVSESD
VSSFEIQHSGLVKQLLLYLTSNSERDTISRDERIKRFLHVFFGCPIPGQEPLGRLDPTEN
GPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGNGSRGSQALKFFNTHQLKCQLQRHPDCT
NVKQWKGGPVKIDPLALVQAIERYLVVRGYGRIREEDEDSDDDGSDDEIDESLAAQFLNS
GSVRHRLQFYIGEHLLPYNMTVYQAVRQFSLQAEEERESTDDEANPLGRAGIWTKTHTIW
YKPVREDEEGCKDAVGGKRGRAQTAPTKTSPRNAKKQDELWHEGVCPSVTNPLESYLISD
PPEGITFDDPSMEVILLLRVLHSISRYWFYLYDNAACKEIIPTGEFINSKLTAKANRQLQ
DPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFDRDRAMQRLLDTNPEINQSDS
QDSRVAPRLDRKKRTINRDELLKQAESVMQDLGSSRAMLEIQYENEVGTGLGPTQEFYAL
VSQELQRADLGLWRGEEVTLSNPKAGSQEGTKYMFSSRGLFAVPFGRTTKPAHIAKIKMK
FRFLGKLMAKAIMDFRLLDLPLGLPFYKWMLRHESSISSHDLVNIDPGVAKSIQHLEDII
RQKKRIEQDRSHTRETLQQALESLNMNGCSVEDLGLDFTLPGFPNIELKKGGKDVPVTIH
NLEEYLRLVVYWTLNEGVSRQFESFREGFESVFPLHHLQYFYPEELDQLLCGSRSESWDV
KTLMECCRPDHGYTHDSRAVRFLFEVLSSFDAEQQRLFLQFVTGSPRLPVGGFRSLNPPL
TIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSSIEIMREKLLIAAREGQQSFHLS
NT seq
6291 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaattccaatccaggggggtcactgcgccgttcacagaggaacaca
gccgcggcccagccaatagaccatacaattgcaggaaggttgcagccagagcaagtaaac
caaaaagcaaattccccacctgaaagtagaagatctaattctaaggcttccaaagccccg
cccagctctgccgtcggctccgcccgcggccacgcctctcgaaggaacagcctctctcta
tctgtgggttcacactcgattccagatccagacttggaagcagcagggacttcaggccag
caggggagacgggagggcagcagcacccgtgctctcaaacgcagctccgcttcagagccc
aacatcagcttttcacccagcccggccaagcggcccaaagcggtgtccagccaccttttg
gagagttcatccagcgggccgtcggcccccacgaccacacccgaagttacagagccaagg
aaggctccggcctctgtcagcaccaagtccaaaaagagacgcttagcagccgagccagct
cccgctagagccctgagcaagaagagcgcatcctaccctggccccagtggggcctcaagc
accccctctcaaaagcgcaagaaggcagacgcctcttcgttgtcgtcctcctcttcttcc
tcccttcccagctcgagcagcgcggcaggccctctgccaccccgcagcgaggccagccgg
gcagccaaacccaccaagctggcgtccaaatcggccgcctcagccaaagctgggtgtagc
accgtgactgactcctcctcttcctccgcctcttcctcttcctcctcttcctcttcctcc
tcggccgccacaggcaccaacagctgtgcccctcagggtgcccggctaaagcagggcaag
gaccagagcaaagcgcgacggtcgcgctctgcgtcctccccttctccacgaaggagcagt
cgggataaagagcagaacaaggctgccggttcctccaagtttgactggacatcccgcttc
aactccaaagtcaacctgccaaagcccaaactgtccctgccgggatcggccaaggctgag
acctcctccaagcctgggccctccggactgcaggccaaactagcaagtttgaggaagtcc
actaagaagcgtagtgagtctcccccagcagagctccccagctgtcggaggagcacacgt
cagaagaccacgggctcttgcgccagcaccagtcggcgaggctcaggcctgggcaagcgc
ggggcagctgaatctcgccgacaggagaaaatggccgactcagacaacaaccaggatggg
gccaattcatcggccgcgcgcacagaggagacaccacaaggggcgtcagcgtctagctca
gtggctggagctgttggcatgaccacctctggagagagtgaatcagatgactctgaaatg
ggaagactgcaagctctactggaggccaggggccttcctcctcacctgtttggcccgttt
gggccccgtatgtctcagctgtttcataggaccattgggagtggagctagctcaaaggca
cagcagctgctgcaggggcttcaggctacgggagacgaatcccagcagctccaggctgcg
atagagatgtgccagctgctagtgatgggtaacgaggagacgctgggaggattccccgtc
aagagcgtcgtacccgccctgatcacactattacagatggagcataattttgatattatg
aatcatgcatctcgcgccctcacctacatgatggaggctctgccgcgctcctctgccgtg
gtggtagacgccatccctgtcttcctggaaaagcttcaggttatacagtttatcgatgtg
gcagagcaagctttgaccgccctggagatgttgtcaaggaggcacagtaaagccatctta
caggctggaggtctagctgactgtttgctctatttggagttcttcagcatcaatgctcag
aggaacgcattagccatcgctgctaactgctgccagagcatcacgccggacgagtttcac
ttcgtcgctgactctctgcccctgctcactcagagactcacacaccaggataagaaatct
gtcgaaagcacttgtctctgttttgccaggctggtggacaactttcagcatgaggagaac
ctgttacagcaggtggcgtcacgggacctcctgaccaacatccagcagctgctggtgctc
actccacccgtgctcagctccggcatgttcatcatggtagtgcgcatgttctctctcatg
tgctccaactgcccatgcctggccgtgcagctcatgaaacagaatatagcagagaccctg
cgtttcctgctctgtggcgcatctaatgggagctgtcaagagcagattgaccttgtaccc
agaagcccccaggagctttatgaactcacctcactcatctgtgagctgatgccatgtctg
cccagagagggcatctttgcggttgatgccatgctgaaaaagggcagtgcccagaccaca
gagggcgccatctggcagtggagagatgacagaggcctgtggcacccgtacaaccgcatc
gacagtcgcatcattgaaactgcacaccagaatggagaagatgagataagtctgtcgaca
ctcggccgtgtctacaccatcgacttcaactctatgcagcagataaatgaagacactggc
actgcccgtgccattcagagaaaacccaaccctctggccaaccccaacacaggagggcac
ttagaggtgcggcgagaggacgcacgtgcacagctgatgaaggaggaccctgagctggcc
aagtgcttcataaagactctgtttggggtcctgtatgaggtgtacagctcctcagcgggg
cctgccgtcagacacaagtgccttagagccatcctccggatcatctactttgcagatgca
gagctgcttaaagacgtactgcgcaaccatgctgtgtctagtcacatagcttccatgctg
tccagtcaggacctgaagattgtagtgggctctctgcaaatggctgagatcctcatgcag
aagcttccagatgtgttcagtgtttatttcagacgggaaggtgtaatgcaccaggtaaag
aacctggctgaatccgaggtgttcctcaccagccctccgaaagcgtgcaccagcggcaca
gctagtctttgcaccaccaccatcaccacagcaaccactacagctgcctctaacgtcaca
cccgacttgggctcccccagttttcagcacagcatggacgactcgctggacctcagtcca
cagggtaggttgagtgatgttctgaaaagaaagcgccttcctaaaagaggaccaaggcgt
cccaagtactccccacccagagacgatgacaaagtggataatcaggccaagagtccgaca
accacacagtcacccaagtcctctttcctggccagtttgaatccaaagacttggggtaag
ctggggactcagacaaacagcgccaattcagagccctcgcgcacagctggggtcagcggt
ttggcacgagtgccgcccaaggactcagtttcaaacaacagggataagataaaggcttgg
ataaaggaacaagccagcaagtttgtggagcgttactttaattctgagagcgtggatgga
agcaaccctgcactgaacgtcctgcaaagactctgcactgccacagaacagctgaactta
caggttgacagtggtgtagagtgtctagaggagataagcagtattgtatctgaatcagac
gtgtcctcctttgagatccagcacagtgggcttgtgaagcagctgctgttgtatctcaca
tcaaacagcgaacgggacactatcagtagagacgagagaatcaagaggttcttgcatgtg
ttcttcggctgcccgataccagggcaggaacctctggggcgtttagacccaacagagaat
ggcccactgctggcgctggtgcacaagatgaacaactgccttagtcagatggaacagttt
cctgttaaagtgcatgattttcccagtgggaatggcaacggaagcaggggttcacaagcc
cttaagttctttaacacccatcaactaaagtgtcagctgcaaagacacccagactgcact
aatgtcaagcagtggaagggcgggccagtcaaaattgaccccttggccctggtgcaggct
atcgagagatacctagtggttcgagggtatggaaggatcagagaggaggatgaagacagt
gatgatgatggttccgatgatgagattgacgaatctttggctgcccagtttttgaattct
gggagtgtacgtcacaggctgcagttctacataggagagcacctgctgccgtacaacatg
actgtttatcaggccgtcaggcagttcagcttacaggccgaggaggaacgagagagcaca
gatgatgaagcaaatcctctgggacgggctggcatctggaccaaaacacacactatatgg
tataagccagtcagagaggatgaagagggctgtaaagacgctgttggagggaagagaggt
cgagcacagacggctcccactaaaacctcccctcgaaatgccaagaaacaggacgaactg
tggcatgagggtgtgtgtcccagtgtgacaaacccgttagagtcatacctcattagtgat
cctccagagggcatcacttttgatgacccttccatggaggtgattctgctgctgagggtc
ctgcactccatcagtagatactggttctacctgtacgataatgctgcatgtaaggagatc
attcccactggtgagtttattaacagtaaactgacagcaaaggccaacagacagttgcag
gatccactggtcatcatgacagggaacatccccacatggctcactgagctcggcaagacc
tgtccattcttcttcccgtttgacacgaggcagatgctcttctacgtgacagcgtttgac
cgcgatcgcgccatgcaacgcctgctcgacaccaacccagaaattaaccagtctgactca
caagacagccgtgtcgctccacgccttgacaggaagaagagaacgataaatcgtgacgag
ctcctgaagcaagcagagtcagtgatgcaagatctcgggagttccagagccatgctggaa
attcaatacgaaaacgaggtgggaacagggcttggccctacacaggagttctatgctctg
gtgtctcaggagttgcagagggccgatttaggtctttggagaggagaggaagtcactctc
tccaaccctaaagcagggagtcaggagggaaccaagtatatgttcagttccagagggttg
tttgctgtaccgtttggacgaactaccaaaccagctcacatcgccaagatcaaaatgaag
ttccgttttcttgggaaactcatggctaaagctatcatggacttcagattgttggacttg
cctctaggtttgccattctataagtggatgctgaggcacgagtcctccatcagctctcat
gatctggtcaatattgatcctggcgtcgccaaatccatccagcacctggaggacatcatc
cgccagaagaagagaatagagcaggacagatcacatacgcgggagaccctccaacaggcc
ttggagagtctcaacatgaacggctgctcggtggaagatctgggcttggacttcacccta
cctggattcccaaacatcgagttgaagaaagggggcaaagacgtgccagtcaccattcac
aacctggaggaatacctcagattggtggtctactggacgctcaatgagggtgtctctcgg
cagtttgagtcgtttagggaaggatttgagtctgtcttccctttgcaccacctgcagtac
ttctatcctgaagagctggatcagttgttatgtggcagtaggtcagagtcgtgggatgtg
aagacactaatggagtgctgcagaccggaccacggctacacacatgacagccgtgcagtg
cggttcctgtttgaggtgctgagcagttttgatgcggagcagcagagacttttcctgcag
tttgtcacaggcagccccagacttcctgtcggaggattccggagtttaaaccctcccctc
accatcgtccggaagacgttcgagtcgacggagaacccggacgacttcctcccgtcggtg
atgacgtgtgtgaactacctgaaactgccggattactccagcatcgagatcatgcgcgag
aaactgttgattgctgcgcgcgagggccagcagtctttccatctgtcttga
DBGET
integrated database retrieval system
