Labeo rohita (rohu): 127180499
Help
Entry
127180499 CDS
T09007
Symbol
colgalt1b
Name
(RefSeq) procollagen galactosyltransferase 1
KO
K11703
collagen beta-1,O-galactosyltransferase [EC:
2.4.1.50
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh00514
Other types of O-glycan biosynthesis
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127180499 (colgalt1b)
09107 Glycan biosynthesis and metabolism
00514 Other types of O-glycan biosynthesis
127180499 (colgalt1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lroh01003
]
127180499 (colgalt1b)
Enzymes [BR:
lroh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.50 procollagen galactosyltransferase
127180499 (colgalt1b)
Glycosyltransferases [BR:
lroh01003
]
O-Glycan biosynthesis
O-linked Gal type
127180499 (colgalt1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_transf_25
Glyco_tranf_2_4
Anp1
Motif
Other DBs
NCBI-GeneID:
127180499
NCBI-ProteinID:
XP_050990585
LinkDB
All DBs
Position
1:3217524..3231274
Genome browser
AA seq
604 aa
AA seq
DB search
MHLLCFFFLLLWTGPVRSYFPEERWSPESALLAPRVLVALVCRNSAHSLPHVLGAIDRLN
YPKDRMAVWVATDHNSDNTTAILREWLTNVQNFYHYVEWRPQEEPSVYEDESGSKHWTNL
RYEHVMKLRQAALDTAREMWADYFMMVDCDNLLTNRDVLWKLMRENKTIAAPMLESRAAY
SNFWCGMTSQGYYKRTPAYMPIRRQERKGCFAVPMVHSTFLLDLRKEASRELAFYPPHPD
YSWAYDDIIIFAFSARMAEVQMYICNRETYGYFPVPLRSHNTLQDEADSFLHSLMEVMVR
NPPSEPSVYLSLPPKQPDKMGFDEVFMINLLRRSDRRERMLRTLYEQEIACKIIAAVDGK
ALNVSQIEALGIEMLPGYSDPYHGRPLTKGELGCFLSHYNIWTEIVDRGLKTSLVIEDDL
RFEVFFKRRLQNLMDEIASQRLDWDLIYIGRKRMQVDRPEKSVPRIHNLVEADYSYWTLG
YAISLRGAQKLLRAEPLKKMLPVDEFLPVMYNKHPVEDYMSHFERRDLRAFSAEPLLVYP
THYTGDPGYISDTETSTVWDNETVHTDWDRARSRKSSEQEELSSEAQNSDVLQSPLDSTA
RDEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcatctgctgtgtttctttttcctgctgctatggaccggtccggtgcgcagttatttc
ccggaggagcgctggagcccggagtccgcgctgctcgcgccgcgggtgctggtcgctctg
gtgtgccgcaactcggcgcactctctgccgcacgtcctcggtgccatcgaccgcctcaac
taccccaaagaccgcatggctgtatgggtggccacagatcataattcagacaacaccacc
gcgatcctgcgcgaatggctgacaaacgtacagaacttctatcattatgtggagtggaga
cctcaggaggagcccagcgtctatgaagacgagagtgggtcgaagcactggaccaacctg
cgatatgagcatgtgatgaagctccgtcaggcggccctcgacacggcgcgtgagatgtgg
gccgactactttatgatggtggactgtgataacctgctgactaaccgggatgttttatgg
aagctgatgcgggagaacaagacgatcgcggcaccgatgctggaatccagagcggcgtat
tcaaacttctggtgcggcatgacgtctcagggttattataagcggacgccggcctacatg
cccatccgcagacaggagcgtaagggctgcttcgccgttcccatggttcactccaccttc
ctgctggacctgaggaaggaggcgtcccgtgagctcgccttctacccgcctcatcccgac
tacagctgggcctacgatgacatcatcatcttcgccttctccgcacggatggcagaggtt
cagatgtacatctgcaacagagagacttatgggtatttccctgtgcccctgcgctcccat
aataccttgcaggacgaggcggacagctttctgcactcgctgatggaagttatggtgcgc
aatcctccatcagagccgtctgtgtatctctctcttcctcctaaacagccggataaaatg
ggctttgatgaggtgtttatgataaacctgctgaggcgttcggaccgcagggagcgcatg
ctgaggactctgtacgagcaagagatcgcgtgcaaaatcatcgcagctgtagatggcaag
gcactcaatgtcagtcagatcgaggcgctggggattgagatgctgcccggatacagcgac
ccgtatcacggccggccgctcactaagggagagttgggctgcttcctgtcgcactacaac
atctggactgagattgtggatcgggggctgaagacgtctctggtgattgaggacgatctg
cgctttgaggttttctttaagcgtcgtttgcagaatctgatggatgagatcgcatctcag
cggctggactgggacttgatttatatcggccggaagcggatgcaggtggaccgaccggag
aaatctgtgcccagaatccacaacctggtggaggcagattattcgtactggacgttggga
tacgcgatctcgctacgcggcgctcagaagctgctgcgggctgaaccgctcaaaaagatg
ctgcccgtggacgagtttttgcccgtcatgtacaacaaacaccctgttgaggactacatg
tctcacttcgagcggcgggatctgcgtgcgttttcggccgaaccgctgctggtttacccc
acgcactacacgggcgacccgggctacatcagcgacaccgagacctccaccgtctgggac
aacgagacggtccacaccgactgggaccgggcgcgatcgcgcaagagcagcgagcaagag
gagctgagcagcgaggcgcaaaactcagacgtgctgcagtcgccgctggacagcacggcc
cgcgacgagctctag
DBGET
integrated database retrieval system
