Labeo rohita (rohu): 127180519
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Entry
127180519 CDS
T09007
Symbol
sema6dl
Name
(RefSeq) sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6D, like isoform X1
KO
K06842
semaphorin 6
Organism
lroh
Labeo rohita (rohu)
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Gene cluster
GFIT
Motif
Pfam:
Sema
PSI
Motif
Other DBs
NCBI-GeneID:
127180519
NCBI-ProteinID:
XP_050990575
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All DBs
Position
18:complement(32580602..32688629)
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AA seq
1076 aa
AA seq
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MGWRELTIDLLLLLLVVSHLEAVSFPEDNIPLDAVDRHYARQYPVFRGRPSGNESQHRLD
FQLMTKIHDTLFIAGRDQVYLVSLRESYRNEIIPYRKLTWRSGQADRETCAMKGKHRDEC
HNFIKVLVPRNDDLVFICGTNGFNPMCRYYRLDNLEFDGEEISGLARCPFDAKQTNVALF
ADGKLYSATVADFLASDAVIYRSMGDGSALRTIKYDSKWLKEPHFLHAVDYGDFVYFFFR
EIAAEHNNLGKAVYSRVARICKNDMGGSQRVLEKHWTSFVKARLNCSVPGESFFYFDVLQ
AITDIIDINGVPSVVGVFTTQLNSIPGSAVCAFSMVDIEKAFRGRFKEQKTADSVWTPFP
EDKLPKPRPGCCAGHGSAESYKTSIEFPDDTLQFIKSHPLMDASVPSIGDEPWFTKTRVR
YRLTALAVDNTAGPHKNYTVVFIGSEAGIVLKVLAKTSPLSLNDSVLLEEIDVFNQAKCS
SSNEDDRRILSFHLDKDTHTLYVAFSSCVVRIPLSRCERHSSCQKSCIASRDPYCGWMSH
GACERIPAAVQTGYEQDVEYGNTAHLGDCHEFLATTSAPDFKSYGDPTSDMELPSSSVTV
PATSEPIQSPQTIPTQIPQLFGSRKFVLHDDPATSHSVEHIPGVLEGVWEIQAGESNQMV
HMNILISCVLAAFLLGAFIAGMVVYCYRDAFLRTPRKIQKDAESAQSCTDSTGSFAKLNG
LFDSPVKEYQPNMDSPKLYTNLLSNGREVPSTGDTKTMLLSGQPPELAALPTPESTPVLQ
QKSLQPIKNQWERAHGKISGSRKDGPPKSPQYLPSSPPPHSAISNPHIPSAVVLPNATHE
NRASFSTPEGPQAEKKVQNSDQHGSKSGRKDQRRTVDARNTLNDLLKHLNESNPKALMVE
MPKSRQHLMLEPIVSPTEIPPKVPSREASLYSPSSSLPRNSPTKRLDVPTTPTSPTGQMG
TLERQRYHRSSSQRHSISSPPKGLHSPSGAIVSRQPSMNRGGYMPPTPTPPTRLDSHGVP
MAMTPSVSRQSSYSGHGSLPRTSIKRTASLKPDVPPKPNGFAPQTAQMRAVNKYSY
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atggggtggcgagaactgacgattgacctgctgctactgctgctggtggtgtcccatctg
gaggctgtgagctttcctgaggacaatattcctttagacgctgtggaccgacactatgca
cgacagtacccagtgtttcgtggacgcccctctggcaacgaatctcagcacagactggac
tttcagctgatgaccaagatacatgatacactttttatcgcgggcagggaccaggtgtat
ttagttagtctgagagagtcctacaggaacgagattattccatacaggaagctgacgtgg
cggtcggggcaggccgacagggagacgtgcgccatgaagggaaagcacagagacgagtgc
cataatttcattaaagtcctggttccgagaaacgatgatcttgtgttcatctgcggaaca
aatggtttcaaccccatgtgccgttactacaggttggataacttggagtttgatggggaa
gagatcagcggtttggcccgatgcccatttgacgccaagcagacgaacgttgccctgttt
gccgatggtaagctgtactcagcgacggtggcggatttcttggccagcgatgctgtgatt
tatcgcagcatgggagatggttctgcacttcgcaccatcaagtatgactccaagtggtta
aaagagccacattttctccacgccgtggattatggggattttgtctacttctttttcaga
gaaatcgcagctgagcacaacaacttgggaaaggcggtttactccagagtggctcggatc
tgtaaaaatgacatgggagggtctcagcgggtgctggaaaaacactggacatcttttgtt
aaggctcgcctgaactgttccgttcctggagaatcgtttttctactttgacgtccttcag
gctattacggacatcatcgacattaacggggtgccttctgtggttggagttttcaccacc
cagttgaacagcatccctggctcagcggtgtgtgcgttctccatggtggacattgagaaa
gctttccgtggccgtttcaaagagcaaaagacggcagattcagtgtggacgccatttcct
gaggacaagctgcccaagcccagacccggctgttgcgcgggacacggttcagcagagtct
tacaaaacctccatcgagtttccagacgatacccttcagttcatcaagtcacacccactc
atggacgcctcagtcccctccatcggagacgaaccgtggttcaccaaaacaagagtcagg
tacaggctaacggcactcgccgttgataacactgcaggaccacataagaattacacagtg
gttttcattggctctgaggcaggcattgtgctgaaagttctggccaagacgtccccactg
tctttaaatgacagcgtcctgctggaggagatcgatgttttcaaccaagccaagtgttca
tccagcaatgaggacgatcggcgaattctgtctttccacctagataaagacacccacaca
ctctatgtggccttttccagctgtgtggtccgaataccactcagccgctgtgaacgacac
agttcctgtcaaaagtcttgtattgcttctagagacccatattgtggctggatgtcacat
ggagcttgtgagcgtattcctgcagctgtgcaaactggttatgagcaagatgttgaatac
ggcaacacggctcacctcggcgattgtcatgaatttttggccactacatcagcgccagat
ttcaaatcatatggcgacccaacctctgacatggagttgccatcatcgtcagtcacagtg
cccgcgacctctgaacccatacaatcaccccaaaccatccccactcagattccccaactc
tttggctcacggaaatttgtgctccacgatgacccagccacttcacattctgttgagcat
ataccaggtgtgctggagggtgtatgggaaatacaagcaggtgaatctaaccagatggtg
cacatgaatatcctcatctcctgtgtgttagctgccttcctgctcggtgcgttcatcgct
ggcatggttgtttactgctatagagacgctttccttcgcactccacgcaaaatccaaaaa
gatgcagagtcagcacagtcctgcactgattccactggcagctttgccaagcttaacggt
ctgttcgacagtcctgtgaaagaataccaacccaatatggattctcccaaactttacacc
aacctgttgagcaatgggagggaggtgccatccactggagacacaaagacaatgctcctt
agtggacagccaccagaactagcagcactgcctacacccgagtccacacctgtgctgcaa
cagaagagccttcagccaattaagaaccaatgggagagagctcacggaaagataagcggc
tcccgcaaagatgggccacccaaaagtccgcagtaccttccctccagtccccctcctcac
tccgccatcagcaacccccacatccccagtgccgtggtactgcccaatgccacacatgag
aacagggcatccttcagtactcctgaagggcctcaagcagaaaagaaggtccagaatagt
gatcaacatggatctaaatctggccgcaaagaccagcgacgcactgtggatgccaggaac
acactaaatgacctcctgaagcacctgaatgagagcaaccccaaggccctcatggtggag
atgcccaaatcccgccagcacctgatgctggaacccattgtaagcccaacagagattcca
cccaaagtcccaagccgagaggcctccttgtactctccctcttcctctttgcccaggaat
agcccgaccaagagactggatgtgccgactacaccaacatcgcccacagggcagatggga
actctggagagacagcggtatcaccgcagctcatcccagcgacactccatatcctcgccg
cccaaagggctgcactcacccagtggggccatagtgtcccggcaacctagtatgaacaga
ggtgggtacatgcccccaactcctaccccacccactagactagactctcacggggtgcca
atggctatgacaccttccgtatcccggcagagcagctacagtggtcatggatcattacca
cggacatccatcaaacggacagcatcgttaaagcccgatgtgccacccaaacccaatggc
tttgcaccacagactgcacaaatgagggcagtgaacaagtatagctactga
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