Labeo rohita (rohu): 127180520
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Entry
127180520 CDS
T09007
Symbol
chrna5
Name
(RefSeq) neuronal acetylcholine receptor subunit alpha-5 isoform X1
KO
K04807
nicotinic acetylcholine receptor alpha-5
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127180520 (chrna5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127180520 (chrna5)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
127180520 (chrna5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Ig_2
Ig_3
ig
V-set
I-set
MHYT
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
127180520
NCBI-ProteinID:
XP_050990583
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All DBs
Position
18:32507102..32526366
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AA seq
791 aa
AA seq
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MVGVFLLAYIYVNLFLKCQGQNIHQAKIFSENTEVPEGGRLEVTCSTFGFTVKPVYLYLC
KNGKAIDMKNAPTRQDTAFKIERIEMNHSGNYSCVFSDEQLQTSEVMGYGHNYIFINVIE
SFIYTQIHSLKSKVPVGGDAAFNCKTSNPLHKKQLENMILVYLIKNGKPIEVNIWDTEKM
MTTFTLREVRMEDAGSYSCVVLLNILPYQGMRFHQNIKVDLQITAISNSGINKVTIAVTC
STIVLLLSLLGIWVLIRKRGCLGLHNKRSSKNETELREAEKFYEEIDKPDTSGAGNIQRV
DWPGADWEDSSDGRLCGFAAPDGIMVTAQTVRCLLLLVCCTVLCSSIGPPVLSSYAKTED
KLFKHLFSSYQKWVRPVEDLNGTVQVKFGLAISQLVDVDEKNQLMTTNVWMKQEWTDMKL
RWNPDHYLGITSIRVPSDSIWIPDIVLYDNADGNFEATVTKAVVRYDGTISWTPPANYKS
ACTIDVTFFPFDLQNCSMKFGSWTYDGSQVDILLEDVHVDKRDYFDSGEWEIVTATGSRG
LRSDGTFFYPSITYSFIIRRLPLFYTLFLIIPCIGLSFLTVLVFYLPSNGGEKISLCTSV
LVSLTVFLLVIEEIIPSSSKVIPLIGEYLVFTMIFVTLSIVITVFAINIHHRSSSTHHSM
APWVRRIFLHHLPKLLCMRSHVDRYATTAARNGREGLGYAKSPGHDTTPLLNTEHSLRAA
LESIRYITLHVVKENEVREVVQDWKFVAQVLDRVFLWAFLLVSLLGSALLFIPVIYKWAN
IIVPSYAGSTS
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atggttggcgtgtttctccttgcatatatctatgtgaatctattccttaaatgccaaggt
caaaacattcatcaagctaagattttcagtgaaaatacagaagtaccagaaggcggtaga
ctggaggttacctgcagcacatttggttttacagtaaagccagtttatttatatttgtgt
aaaaatggtaaagctattgatatgaaaaatgcacccactcgacaagacaccgcctttaaa
atagagagaatagaaatgaaccattcaggcaactacagctgtgtgttttcagatgagcag
ttgcaaacatcagaagtgatgggatatggtcataattacatcttcataaatgtgatcgaa
tcttttatttatacacagatacattcgcttaagtctaaggtgccggtgggaggtgatgct
gcatttaactgtaaaacgtccaatcctttacacaaaaaacagctcgagaacatgattttg
gtttatctaatcaaaaatggaaaacctattgaagttaatatttgggacacagagaagatg
atgacaacattcaccctcagagaggtccggatggaagacgctggatcatacagttgtgtt
gtattgttaaacatactcccttaccaaggaatgagatttcatcaaaatattaaagtcgat
cttcagataactgcaatatctaacagtggcataaacaaagttacaattgccgtaacatgc
tctaccatagtgttgcttctcagtctgttgggaatctgggtactgatccgaaaacgagga
tgccttggattacacaataaaagatcctcaaagaatgagacagagctcagagaagcagaa
aaattctatgaagaaattgacaaacctgacacatctggtgctggtaacatacaacgtgtg
gactggcctggtgcagattgggaagattcttctgatggtcgtctctgtggctttgctgct
cctgatggtatcatggtaacagctcaaactgtcagatgtctcctcctgcttgtctgctgt
actgtactctgctcctctatagggcctcctgtgctgtcttcctatgccaagacagaagac
aagctgtttaaacatctgttcagcagctaccagaaatgggtgagaccagtggaggatcta
aacggaacagtgcaggtgaaatttggcctggctatttcccagctggtggatgtggatgag
aagaaccagctgatgacaaccaatgtttggatgaagcaggagtggacagacatgaagctc
cgatggaatccagatcattatctgggcatcacctccatcagagttccctcagactccatc
tggattcctgacattgtgctctatgacaatgcagatggtaatttcgaggccacggtgaca
aaagcagtggtgagatatgacggcactatctcctggacccctcctgccaactataaatct
gcctgcaccatcgatgtgacgttcttcccctttgaccttcagaactgctccatgaagttt
ggttcctggacctatgacggttcccaggtggacattctccttgaggatgtacacgtggac
aaacgtgactattttgacagtggtgaatgggagattgtgacagccacaggtagccggggt
ttgagaagtgatgggacctttttctatccatctattacttactcctttattatccgacgt
cttcctcttttctacacactcttcctcatcattccctgcattggactgtctttcctgacc
gtgctggtgttttatctcccatctaatggaggagaaaaaatctccctctgcacgtccgtc
ctcgtctctcttactgtcttccttcttgtgatagaagagatcatcccttcctcctcaaag
gtgattcctctcattggagaatatctggtctttactatgatcttcgtgacgctttccatt
gtcatcactgtctttgccattaacatccatcatcgctcctcatctactcatcacagcatg
gcgccctgggtccgccgtatctttctgcaccacctgcctaaactgctctgcatgcgcagc
catgtggaccgctacgccaccactgctgcgaggaacggaagagaagggcttggctatgca
aagagtccaggccatgataccactcctctgctcaatacagagcatagtctacgggcagcc
ttagaatctatacgctacatcacgcttcatgtggtgaaggagaatgaagtcagagaggtt
gttcaggactggaagtttgtggcccaggttctggaccgggttttcctgtgggcatttctc
ttagtatcactgctcggctctgctctgcttttcattccagtcatctataaatgggccaac
atcattgttcccagctatgctggaagcacaagctaa
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