KEGG   Labeo rohita (rohu): 127180537
Entry
127180537         CDS       T09007                                 
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    127180537 (snrpd2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:lroh03041]
    127180537 (snrpd2)
   03032 DNA replication proteins [BR:lroh03032]
    127180537 (snrpd2)
Spliceosome [BR:lroh03041]
 Complex A
  U1 snRNP components
   Sm proteins
    127180537 (snrpd2)
  U2 snRNP components
    127180537 (snrpd2)
 Complex B
  U1 snRNP components
    127180537 (snrpd2)
  U4/U6.U5 tri-snRNP components
    127180537 (snrpd2)
 Complex C
  U2 snRNP components
    127180537 (snrpd2)
DNA replication proteins [BR:lroh03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     127180537 (snrpd2)
SSDB
Motif
Pfam: LSM Hfq GIT1_C
Other DBs
NCBI-GeneID: 127180537
NCBI-ProteinID: XP_050990616
LinkDB
Position
18:32285959..32289465
AA seq 118 aa
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq 357 nt   +upstreamnt  +downstreamnt
atgagtttgttaaacaagcccaaatctgagatgactccagaggagctccagaagcgagag
gaggaagagtttaacaccggtccactttcagtgctcacccagtctgtaaaaaacaacaca
caggttcttatcaactgccgcaacaataagaagctgctgggcagagtcaaagcattcgac
aggcattgtaacatggttctggagaatgtgaaggaaatgtggacggaggtgcccaagagt
ggcaagggcaagaagaagtcaaagccagtgaacaaggatcgttacatctcaaagatgttc
ctgagaggcgattcagtcatcgtggtgctgaggaacccactcatcactgggaaataa

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