Labeo rohita (rohu): 127180537
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Entry
127180537 CDS
T09007
Symbol
snrpd2
Name
(RefSeq) small nuclear ribonucleoprotein Sm D2
KO
K11096
small nuclear ribonucleoprotein D2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
127180537 (snrpd2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lroh03041
]
127180537 (snrpd2)
03032 DNA replication proteins [BR:
lroh03032
]
127180537 (snrpd2)
Spliceosome [BR:
lroh03041
]
Complex A
U1 snRNP components
Sm proteins
127180537 (snrpd2)
U2 snRNP components
127180537 (snrpd2)
Complex B
U1 snRNP components
127180537 (snrpd2)
U4/U6.U5 tri-snRNP components
127180537 (snrpd2)
Complex C
U2 snRNP components
127180537 (snrpd2)
DNA replication proteins [BR:
lroh03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
127180537 (snrpd2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
GIT1_C
Motif
Other DBs
NCBI-GeneID:
127180537
NCBI-ProteinID:
XP_050990616
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All DBs
Position
18:32285959..32289465
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AA seq
118 aa
AA seq
DB search
MSLLNKPKSEMTPEELQKREEEEFNTGPLSVLTQSVKNNTQVLINCRNNKKLLGRVKAFD
RHCNMVLENVKEMWTEVPKSGKGKKKSKPVNKDRYISKMFLRGDSVIVVLRNPLITGK
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atgagtttgttaaacaagcccaaatctgagatgactccagaggagctccagaagcgagag
gaggaagagtttaacaccggtccactttcagtgctcacccagtctgtaaaaaacaacaca
caggttcttatcaactgccgcaacaataagaagctgctgggcagagtcaaagcattcgac
aggcattgtaacatggttctggagaatgtgaaggaaatgtggacggaggtgcccaagagt
ggcaagggcaagaagaagtcaaagccagtgaacaaggatcgttacatctcaaagatgttc
ctgagaggcgattcagtcatcgtggtgctgaggaacccactcatcactgggaaataa
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