Labeo rohita (rohu): 127180567
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Entry
127180567 CDS
T09007
Symbol
gtf2b
Name
(RefSeq) transcription initiation factor IIB
KO
K03124
transcription initiation factor TFIIB
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
127180567 (gtf2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lroh03021
]
127180567 (gtf2b)
Transcription machinery [BR:
lroh03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
127180567 (gtf2b)
Prokaryotic type
Archaeal type
TFB
127180567 (gtf2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
Cyclin_N
Cyclin_C
KIF9
RB_B
Sigma70_r4
BRF2-like_C_cyclin_rpt
Motif
Other DBs
NCBI-GeneID:
127180567
NCBI-ProteinID:
XP_050990654
LinkDB
All DBs
Position
2:15478667..15486437
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AA seq
316 aa
AA seq
DB search
MASTSRGDSLPKVQCPNHPDAILVEDYRAGDMICPECGLVVGDRVIDVGSEWRTFTNEKA
TKDPSRVGDAQNPLLNGGDLTTMISKGTGAASFDEFGNNKYQNRRTMSSSDRAMLNAFKE
ITTMADRINLPRNIIDRTNNLFKQVYEQKSLKGRSNDAIASACLYIACRQEGVPRTFKEI
CAVSRISKKEIGRCFKLILKALETSVDLITTGDFMSRFCSNLGLPKQVQMAATYIARKAV
ELDLVPGRSPISVAAAAIYMASQASAEKKTQKEIGDIAGVADVTIRQSYRLIYPRAADLF
PPDFKFDTPVDKLPQL
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgacgagccgtggagactctcttcccaaggtgcaatgccccaatcaccccgat
gcaatcctggttgaggactacagggcaggagacatgatctgtcctgaatgtggccttgta
gtaggtgaccgtgtaatcgatgtaggatcagagtggagaacgttcaccaatgagaaagca
actaaagacccgtctcgtgttggtgacgctcagaaccctctcctcaatggaggagacctc
accaccatgatcagcaaaggaacaggtgcagcaagctttgatgagtttggaaataacaag
taccagaatcggagaaccatgagcagctccgatcgagccatgttgaatgcctttaaagag
atcaccaccatggccgacagaatcaacctccccagaaacatcattgaccgaacaaacaac
ctgttcaaacaggtttatgaacagaagagtcttaaaggcagaagtaatgatgcgatcgct
tcggcctgcctttacatagcgtgcagacaggagggcgtccctagaacgtttaaagaaatc
tgtgccgtgtctcggatctcaaagaaggagattggccgttgcttcaagcttatcctgaag
gctcttgagacgagtgtggacctcattacaaccggcgacttcatgtcacgtttctgctcc
aacctgggcttgccgaaacaggtgcaaatggcagccacttacatcgccaggaaggccgtc
gaactggacttggttccagggcgcagtccgatctcagtggcagccgcagccatttatatg
gcctctcaagcatctgcagagaaaaagacacagaaggagattggggacatcgctggagtg
gcagacgtcaccatccgtcagtcctaccgtctcatttatccccgtgctgccgacctcttt
cctccagacttcaagttcgacacaccagtggataaactgcctcaactgtga
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