Labeo rohita (rohu): 127180577
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Entry
127180577 CDS
T09007
Symbol
rasgrf1
Name
(RefSeq) ras-specific guanine nucleotide-releasing factor 1
KO
K04349
Ras-specific guanine nucleotide-releasing factor 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127180577 (rasgrf1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127180577 (rasgrf1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
RhoGEF
PH
RasGEF_N
SOS1_NGEF_PH
GOLGA2L5
Uso1_p115_head
PH_11
P4Ha_N
IQ
MYO6_lever
DUF641
Motif
Other DBs
NCBI-GeneID:
127180577
NCBI-ProteinID:
XP_050990663
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All DBs
Position
18:16552907..16605658
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AA seq
1256 aa
AA seq
DB search
MQKGIRLNDGHVTYLGLLAKKDGTRRGCLSKKSSDNTKWHTKWFALLQNMLFYFESESSS
RPSGLYLLEGCVCDRSPSPKPSLSAKECLEKQYYFTVSFNHENQKALELRTEDVKDCDEW
VAAISHASYRNLATEHETLMQKYLHLLQIVETEKTVAKQLRQQIEDGEIEIERLKSEIAA
MLKDNEKIQSNPTTAPSDDDSEIKKIKKVQSFLRGWMCRRKWKTIIQDYIRSPHAESMRK
RNQVVFSMLEAEAEYVQQLHILVNNFLRPLRMAASSKKPPITHDDVSSIFLNSETIMFLH
QIFYQGLKARIASWPTLVLADLFDILLPMLNIYQEFVRNHQYSLQILAHCKQNRDFDKLL
KQYEAKPDCEERTLETFLTYPMFQIPRYILTLHELLAHTPHEHVERNSLDYAKSKLEELS
RIMHDEVSETENIRKNLAIERMIVEGCEILLDTSQTFVRQGSLIQVPMSEKGKITRGRLG
SLSLKKEGERQCFLFSKHLIICTRGSGGKLHLTKNGVVSLIDCTLIEEPEGTDDESKSDK
SGQDMEHLDFKIVVEPKDSQSFTIILVASSRQEKSAWTSDISQCIDNIRCNGLMMNAFEE
NSKVTVPQMIKSDASLYCDDVDIRFSKMMNSCKVLQIRYASVERLLERLTDLRFLSIDFL
NTFLHSYRVFTSADVVLDKLITIYKRPISAIPARSLELFFASSQNNKLLYGEPPKSPRAS
RKFSSPPPLAITKTSSPNRRRKLSLNIPIITGGKALDLAALSCSSNGYASMYSTMSPFSK
TTLDINKLYVSSPITSKIADEGEGKTDKADEVSLGKQDISVREESDNDQIQSDEAEAEVS
PTKSPTTPKNVKCKNSSEFSLFSYNNGMVMSSCRELDNNRSALSAASAFAIATAGANEGT
PTKEKYRRMSLASTGFPTDQRNGDKEFVIRRAATNRVLNVLRHWVSKHSQDFETNTELKM
KVISFLEEVMHDPELLTQERKAAANIIRTLTQEDPGDNQICLEEVLQMAEGGKSEPFENH
SALEIAEQLTLLDHLVFKVIPYEEFFGQGWMKNDKNEKTPYIMKTTKHFNDISDLIATEI
LRSEDVNIRVAVIEKWVAVADICRCLHNYNAVLEITSSLNRSSIFRLKKTWLKVSKQTKT
VIDKLQKLVSSEGRFKNLREALKNCDPPCVPYLGMYLTDLAFIEEGTPNYTEDNLVNFSK
MRMISHIIREIRQFQQTAYKIDYQPKAALYLLDRSSVMDEEGLYEASLRIEPKVPN
NT seq
3771 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagggaattcgacttaatgatggtcatgtcacctacctgggtcttttggcaaag
aaagatggcacgaggcgaggctgcttaagcaaaaagagctccgacaacacaaaatggcac
accaagtggtttgctctgttgcaaaatatgcttttttattttgagagcgagtccagttcg
cgaccctcgggattatacctgttggagggatgtgtgtgtgacaggtcgccctcacccaaa
ccttcactctcagccaaggagtgcttagaaaaacagtattatttcacagtcagcttcaac
catgagaatcagaaggctctggagcttcgtacagaagatgttaaggactgcgatgaatgg
gtggcagcaatatcacatgccagctacagaaacctggccaccgagcatgaaacgctcatg
cagaagtacctccatctactccaaatcgtggagaccgagaaaacagttgctaagcaactt
cgacaacagatagaagatggggagattgagattgaacgtctaaaatcagagattgcagcg
atgctcaaagacaatgagaagattcagtcgaatcccaccactgcacctagtgatgatgat
tcagaaatcaagaaaatcaagaaagtgcaaagcttcttgaggggctggatgtgtcggcga
aagtggaagaccatcattcaggattacatccgttcgccacatgctgagagcatgaggaag
aggaaccaagtcgtcttcagcatgctggaagcagaggctgagtatgtccaacagctccat
atcctcgtcaacaacttcttgagaccgcttcgcatggctgccagttccaagaaaccaccc
ataactcatgatgatgtcagcagcatattcctcaacagtgaaaccataatgtttctgcat
cagatattctaccaagggttgaaagctcgaatagcaagctggccaacattagtcttggcc
gacctatttgacatcctgttgcccatgctgaacatctaccaggagtttgtacgcaaccac
cagtacagtttgcagatcttggcccactgcaagcagaaccgcgacttcgacaagctgctt
aaacagtatgaagccaagcctgactgtgaggagcgcacgctggagacgttcctcacttac
cccatgttccagattcctcgttacatactgaccctccatgagctgttagcgcacacaccg
catgagcatgtggagagaaacagcttggattacgccaagtcaaagctggaggagctttcc
agaatcatgcacgatgaggttagcgagacggagaacattaggaagaacctcgctatcgag
cgtatgatcgtggagggctgtgagattctcctagacaccagccagacctttgtgagacaa
ggatctctgatacaagtgcccatgagcgagaagggcaagatcacccgtggccgactgggc
tctctgtctctgaagaaggagggagagaggcagtgtttcctcttctccaaacatctgatt
atctgcactagaggctctggaggaaaactacacctcaccaagaatggagttgtgtcgctc
atcgactgcacactgatagaggaaccagagggcacagatgatgagtccaagtcagacaag
agcggtcaagacatggagcacctggattttaagattgtggtggagcccaaagacagccag
tccttcaccatcatcctggtggcctcctcgcggcaagagaagtcagcctggaccagtgac
atcagccagtgcatagataatattcgctgtaatgggctgatgatgaacgcctttgaggag
aactctaaagtcactgtgccccagatgatcaagtctgatgccagtctgtactgtgatgac
gtggatatccgcttcagtaagatgatgaactcctgcaaggtgttgcagatccgctacgcc
agcgtggaacgcctgctggagaggttgaccgacctgcgcttcctctccatcgacttcctc
aacaccttcctgcactcctaccgtgtgttcaccagcgcagacgtagtccttgacaaactc
atcactatatacaagaggcctatcagcgccataccagcccgatccctggagctgtttttc
gcgagcagccagaacaacaagctcctctacggagagccaccgaagtcaccccgtgccagc
cgcaagttttcctccccacccccgttggccatcaccaagacatcgtcccccaaccgccgg
cgcaaactgtccctcaacatccccatcatcaccggtgggaaggctctggacctggctgcc
cttagctgttcctccaatggctatgcaagcatgtactccaccatgtcccctttcagcaag
accacgctggacatcaacaagctctacgtgtccagccccatcaccagcaagattgctgac
gagggtgaaggcaagacggacaaggctgatgaggtttcgctgggcaaacaggacatttcg
gtgcgggaggaaagcgacaacgaccagatccagagtgacgaggcagaggctgaagtgtcg
cccaccaaatcacccaccactcccaaaaacgtcaaatgcaaaaactcctcagaattctct
ctgttctcgtacaataatggcatggtgatgtcgtcctgtcgggagctggataacaaccgt
agcgccttgtctgccgcttctgccttcgccatcgcaactgcaggtgccaacgagggcacg
ccgaccaaggagaagtaccgccgcatgtctctggcaagcacagggttccccacggatcag
aggaacggagataaggagtttgtgattcgccgagcagcaactaacagagttctcaatgtc
ctcaggcactgggtgtccaaacactcacaggactttgaaaccaacactgagctcaaaatg
aaagtgattagtttcctggaggaggtgatgcatgatcctgaacttttgacccaagaaaga
aaagctgcagccaacatcataaggacattgacacaggaggatcctggtgacaatcagatc
tgtctggaggaggtgctgcagatggcggaaggaggaaagtcggagcctttcgagaatcat
tcagctctggagatcgcagaacagctcaccctgctggaccaccttgttttcaaagtcata
ccatacgaggagttttttggtcagggatggatgaagaatgacaaaaatgagaagacacct
tacatcatgaaaacgacaaaacacttcaatgatatcagtgacctaatagctacagagatc
ctgcgcagtgaggatgtgaatatacgggtagcagtgatagagaagtgggtggcggtggcc
gatatctgccgctgtctccataactacaatgccgtgctggaaatcacctcatccctcaat
cgcagctccatcttccgtctgaagaagacctggctcaaagtgtccaaacagactaaaaca
gtcatcgacaagctgcagaagttggtctcatctgaaggaagattcaagaacctcagagag
gccttaaaaaattgtgaccctccctgtgtgccatatttgggaatgtacctcactgatttg
gcctttatcgaggaggggacgcccaactacacagaggacaacctggtcaacttttccaaa
atgagaatgatttcccatatcatccgagaaatcaggcagtttcagcaaacggcatacaag
attgattaccagccaaaggcagcactgtatttactggacagaagctcagtgatggatgaa
gaaggcctgtatgaagcctctctcagaattgagcctaaagtacccaactaa
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